RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 PDE3BQ13370 1112 aa7.08□□□□□ -1.28
TMEM55B-204ENST00000553602 FAM9BQ8IZU0 186 aa7.08□□□□□ -1.28
TMEM55B-204ENST00000553602 RNF25Q96BH1 459 aaPredicted RBP7.08□□□□□ -1.28
TMEM55B-204ENST00000553602 DUOX2Q9NRD8 1548 aa7.07□□□□□ -1.28
TMEM55B-204ENST00000553602 RIOK3O14730 519 aaKnown RBP7.07□□□□□ -1.28
TMEM55B-204ENST00000553602 ERICH6Q7L0X2 663 aa7.07□□□□□ -1.28
TMEM55B-204ENST00000553602 DNAJC5Q9H3Z4 198 aa7.07□□□□□ -1.28
TMEM55B-204ENST00000553602 BLMP54132 1417 aaPredicted RBP7.07□□□□□ -1.28
TMEM55B-204ENST00000553602 ERBINQ96RT1 1412 aa7.07□□□□□ -1.28
TMEM55B-204ENST00000553602 CLASP1Q7Z460 1538 aa7.06□□□□□ -1.28
TMEM55B-204ENST00000553602 ARAP3Q8WWN8 1544 aa7.06□□□□□ -1.28
TMEM55B-204ENST00000553602 PLEKHD1A6NEE1 506 aa7.06□□□□□ -1.28
TMEM55B-204ENST00000553602 CCDC144AA2RUR9 1427 aa7.06□□□□□ -1.28
TMEM55B-204ENST00000553602 A2MP01023 1474 aa7.05□□□□□ -1.28
TMEM55B-204ENST00000553602 MYO5CQ9NQX4 1742 aa7.05□□□□□ -1.28
TMEM55B-204ENST00000553602 TSPY4P0CV99 314 aa7.05□□□□□ -1.28
TMEM55B-204ENST00000553602 TSPY10P0CW01 314 aa7.05□□□□□ -1.28
TMEM55B-204ENST00000553602 MNX1P50219 401 aaPredicted RBP7.05□□□□□ -1.28
TMEM55B-204ENST00000553602 NLRP13Q86W25 1043 aa7.05□□□□□ -1.28
TMEM55B-204ENST00000553602 JPH4Q96JJ6 628 aa7.05□□□□□ -1.28
TMEM55B-204ENST00000553602 CARD11Q9BXL7 1154 aa7.05□□□□□ -1.28
TMEM55B-204ENST00000553602 BCL11AQ9H165 835 aa7.05□□□□□ -1.28
TMEM55B-204ENST00000553602 SYCP2Q9BX26 1530 aa7.05□□□□□ -1.28
TMEM55B-204ENST00000553602 PLA2R1Q13018 1463 aa7.04□□□□□ -1.28
TMEM55B-204ENST00000553602 IQGAP1P46940 1657 aa7.04□□□□□ -1.28
TMEM55B-204ENST00000553602 CHRM1P11229 460 aaPredicted RBP7.04□□□□□ -1.28
TMEM55B-204ENST00000553602 IRX6P78412 446 aaPredicted RBP7.04□□□□□ -1.28
TMEM55B-204ENST00000553602 CHRDL2Q6WN34 429 aa7.04□□□□□ -1.28
TMEM55B-204ENST00000553602 CHMP7Q8WUX9 453 aaPredicted RBP7.04□□□□□ -1.28
TMEM55B-204ENST00000553602 ABCC2Q92887 1545 aa7.04□□□□□ -1.28
TMEM55B-204ENST00000553602 SYNMO15061 1565 aa7.03□□□□□ -1.28
TMEM55B-204ENST00000553602 TTC37Q6PGP7 1564 aa7.03□□□□□ -1.28
TMEM55B-204ENST00000553602 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.03□□□□□ -1.28
TMEM55B-204ENST00000553602 VGFO15240 615 aaPredicted RBP7.03□□□□□ -1.28
TMEM55B-204ENST00000553602 MS4A1P11836 297 aa7.03□□□□□ -1.28
TMEM55B-204ENST00000553602 B4GALNT3Q6L9W6 998 aa7.03□□□□□ -1.28
TMEM55B-204ENST00000553602 TMC1Q8TDI8 760 aa7.03□□□□□ -1.28
TMEM55B-204ENST00000553602 STAC3Q96MF2 364 aa7.03□□□□□ -1.28
TMEM55B-204ENST00000553602 NOP58Q9Y2X3 529 aaKnown RBP7.03□□□□□ -1.28
TMEM55B-204ENST00000553602 TRPM2O94759 1503 aa7.02□□□□□ -1.29
TMEM55B-204ENST00000553602 ABCC1P33527 1531 aa7.02□□□□□ -1.29
TMEM55B-204ENST00000553602 DEPDC5O75140 1603 aa7.02□□□□□ -1.29
TMEM55B-204ENST00000553602 MADDQ8WXG6 1647 aa7.02□□□□□ -1.29
TMEM55B-204ENST00000553602 KIAA1210Q9ULL0 1709 aa7.02□□□□□ -1.29
TMEM55B-204ENST00000553602 RRP1P56182 461 aaKnown RBP7.02□□□□□ -1.29
TMEM55B-204ENST00000553602 CCDC136Q96JN2 1154 aa7.02□□□□□ -1.29
TMEM55B-204ENST00000553602 NPC1L1Q9UHC9 1359 aa7.02□□□□□ -1.29
TMEM55B-204ENST00000553602 UHRF1BP1LA0JNW5 1464 aa7.02□□□□□ -1.29
TMEM55B-204ENST00000553602 SCAPERQ9BY12 1400 aa7.01□□□□□ -1.29
TMEM55B-204ENST00000553602 ARHGAP5Q13017 1502 aa7.01□□□□□ -1.29
TMEM55B-204ENST00000553602 SPHKAPQ2M3C7 1700 aa7.01□□□□□ -1.29
TMEM55B-204ENST00000553602 WDR7Q9Y4E6 1490 aa7.01□□□□□ -1.29
TMEM55B-204ENST00000553602 ARID3CA6NKF2 412 aa7.01□□□□□ -1.29
TMEM55B-204ENST00000553602 STK25O00506 426 aa7.01□□□□□ -1.29
TMEM55B-204ENST00000553602 PITPNM1O00562 1244 aa7.01□□□□□ -1.29
TMEM55B-204ENST00000553602 TCERG1O14776 1098 aaKnown RBP7.01□□□□□ -1.29
TMEM55B-204ENST00000553602 ANP32AP39687 249 aaKnown RBP7.01□□□□□ -1.29
TMEM55B-204ENST00000553602 RASEFQ8IZ41 740 aa7.01□□□□□ -1.29
TMEM55B-204ENST00000553602 RTEL1-TNFRSF6BF6WH68 1400 aa7.01□□□□□ -1.29
TMEM55B-204ENST00000553602 ST20-MTHFSA0A0A6YYL1 179 aa7□□□□□ -1.29
TMEM55B-204ENST00000553602 PER1O15534 1290 aaPredicted RBP7□□□□□ -1.29
TMEM55B-204ENST00000553602 IPO9Q96P70 1041 aaKnown RBP7□□□□□ -1.29
TMEM55B-204ENST00000553602 VWDEQ8N2E2 1590 aa6.99□□□□□ -1.29
TMEM55B-204ENST00000553602 CEP152O94986 1710 aa6.99□□□□□ -1.29
TMEM55B-204ENST00000553602 TESK2Q96S53 571 aa6.99□□□□□ -1.29
TMEM55B-204ENST00000553602 ZNF777Q9ULD5 760 aaPredicted RBP6.99□□□□□ -1.29
TMEM55B-204ENST00000553602 PTPRTO14522 1441 aa6.99□□□□□ -1.29
TMEM55B-204ENST00000553602 PIK3C2GO75747 1445 aa6.99□□□□□ -1.29
TMEM55B-204ENST00000553602 TET3O43151 1660 aa6.99□□□□□ -1.29
TMEM55B-204ENST00000553602 DCAF11Q8TEB1 546 aa6.98□□□□□ -1.29
TMEM55B-204ENST00000553602 SGIP1Q9BQI5 828 aa6.98□□□□□ -1.29
TMEM55B-204ENST00000553602 RCAN3Q9UKA8 241 aa6.98□□□□□ -1.29
TMEM55B-204ENST00000553602 PLCH2O75038 1416 aa6.98□□□□□ -1.29
TMEM55B-204ENST00000553602 MYOM2P54296 1465 aa6.98□□□□□ -1.29
TMEM55B-204ENST00000553602 ZFYVE16Q7Z3T8 1539 aa6.97□□□□□ -1.29
TMEM55B-204ENST00000553602 MYOM1P52179 1685 aa6.97□□□□□ -1.29
TMEM55B-204ENST00000553602 CHD1O14646 1710 aa6.97□□□□□ -1.29
TMEM55B-204ENST00000553602 NKX1-1Q15270 411 aaPredicted RBP6.97□□□□□ -1.29
TMEM55B-204ENST00000553602 ZNF326Q5BKZ1 582 aaKnown RBP6.97□□□□□ -1.29
TMEM55B-204ENST00000553602 RYDENQ9NUL5 291 aaKnown RBP6.97□□□□□ -1.29
TMEM55B-204ENST00000553602 INO80Q9ULG1 1556 aaPredicted RBP6.97□□□□□ -1.29
TMEM55B-204ENST00000553602 MYO3AQ8NEV4 1616 aa6.97□□□□□ -1.29
TMEM55B-204ENST00000553602 SCAF11Q99590 1463 aaKnown RBP6.97□□□□□ -1.29
TMEM55B-204ENST00000553602 EIF3AQ14152 1382 aaKnown RBP6.96□□□□□ -1.29
TMEM55B-204ENST00000553602 DISP3Q9P2K9 1392 aa6.96□□□□□ -1.29
TMEM55B-204ENST00000553602 PYGBP11216 843 aa6.96□□□□□ -1.3
TMEM55B-204ENST00000553602 TMF1P82094 1093 aa6.96□□□□□ -1.3
TMEM55B-204ENST00000553602 NGEFQ8N5V2 710 aa6.96□□□□□ -1.3
TMEM55B-204ENST00000553602 USP35Q9P2H5 1018 aa6.96□□□□□ -1.3
TMEM55B-204ENST00000553602 ASXL1Q8IXJ9 1541 aa6.96□□□□□ -1.3
TMEM55B-204ENST00000553602 ZCCHC11Q5TAX3 1644 aaKnown RBP6.95□□□□□ -1.3
TMEM55B-204ENST00000553602 GTPBP6O43824 516 aaPredicted RBP6.95□□□□□ -1.3
TMEM55B-204ENST00000553602 PRKCSHP14314 528 aaPredicted RBP6.95□□□□□ -1.3
TMEM55B-204ENST00000553602 HNRNPMP52272 730 aaKnown RBP eCLIP6.95□□□□□ -1.3
TMEM55B-204ENST00000553602 CDCA8Q53HL2 280 aa6.95□□□□□ -1.3
TMEM55B-204ENST00000553602 STK24Q9Y6E0 443 aa6.95□□□□□ -1.3
TMEM55B-204ENST00000553602 SBNO2Q9Y2G9 1366 aa6.95□□□□□ -1.3
TMEM55B-204ENST00000553602 ABCA9Q8IUA7 1624 aa6.94□□□□□ -1.3
TMEM55B-204ENST00000553602 KDM5AP29375 1690 aaKnown RBP6.94□□□□□ -1.3
TMEM55B-204ENST00000553602 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms