RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 LRPPRCP42704 1394 aaKnown RBP17.48■□□□□ 0.39
SHMT2-205ENST00000553474 PPP4R2Q9NY27 417 aa17.48■□□□□ 0.39
SHMT2-205ENST00000553474 INSRP06213 1382 aa17.47■□□□□ 0.39
SHMT2-205ENST00000553474 KANK1Q14678 1352 aa17.47■□□□□ 0.39
SHMT2-205ENST00000553474 MADDQ8WXG6 1647 aa17.47■□□□□ 0.39
SHMT2-205ENST00000553474 PARD3Q8TEW0 1356 aa17.46■□□□□ 0.39
SHMT2-205ENST00000553474 ZC3H13Q5T200 1668 aaKnown RBP17.46■□□□□ 0.39
SHMT2-205ENST00000553474 RGL3Q3MIN7 710 aa17.46■□□□□ 0.39
SHMT2-205ENST00000553474 KIAA1210Q9ULL0 1709 aa17.46■□□□□ 0.39
SHMT2-205ENST00000553474 CAMSAP1Q5T5Y3 1602 aa17.44■□□□□ 0.38
SHMT2-205ENST00000553474 IQGAP1P46940 1657 aa17.44■□□□□ 0.38
SHMT2-205ENST00000553474 RIMS1Q86UR5 1692 aaKnown RBP17.44■□□□□ 0.38
SHMT2-205ENST00000553474 TESK2Q96S53 571 aa17.44■□□□□ 0.38
SHMT2-205ENST00000553474 TMF1P82094 1093 aa17.43■□□□□ 0.38
SHMT2-205ENST00000553474 NLRP13Q86W25 1043 aa17.43■□□□□ 0.38
SHMT2-205ENST00000553474 NUDCQ9Y266 331 aa17.43■□□□□ 0.38
SHMT2-205ENST00000553474 ABCC3O15438 1527 aa17.43■□□□□ 0.38
SHMT2-205ENST00000553474 CFAP65Q6ZU64 1925 aaKnown RBP17.43■□□□□ 0.38
SHMT2-205ENST00000553474 NBPF1Q3BBV0 1214 aa17.43■□□□□ 0.38
SHMT2-205ENST00000553474 ADAMTSL3P82987 1691 aa17.42■□□□□ 0.38
SHMT2-205ENST00000553474 ESF1Q9H501 851 aaKnown RBP17.41■□□□□ 0.38
SHMT2-205ENST00000553474 RNF123Q5XPI4 1314 aa17.41■□□□□ 0.38
SHMT2-205ENST00000553474 CLTCL1P53675 1640 aa17.41■□□□□ 0.38
SHMT2-205ENST00000553474 PER1O15534 1290 aaPredicted RBP17.4■□□□□ 0.38
SHMT2-205ENST00000553474 SLC24A1O60721 1099 aa17.4■□□□□ 0.38
SHMT2-205ENST00000553474 CDCA8Q53HL2 280 aa17.38■□□□□ 0.37
SHMT2-205ENST00000553474 MROH2AA6NES4 1674 aa17.38■□□□□ 0.37
SHMT2-205ENST00000553474 EFCAB6Q5THR3 1501 aa17.38■□□□□ 0.37
SHMT2-205ENST00000553474 LMTK2Q8IWU2 1503 aa17.38■□□□□ 0.37
SHMT2-205ENST00000553474 SCAF11Q99590 1463 aaKnown RBP17.38■□□□□ 0.37
SHMT2-205ENST00000553474 DISP3Q9P2K9 1392 aa17.37■□□□□ 0.37
SHMT2-205ENST00000553474 PLPPR3Q6T4P5 718 aa17.37■□□□□ 0.37
SHMT2-205ENST00000553474 MYOM2P54296 1465 aa17.36■□□□□ 0.37
SHMT2-205ENST00000553474 C3P01024 1663 aa17.36■□□□□ 0.37
SHMT2-205ENST00000553474 KIF1BO60333 1816 aa17.36■□□□□ 0.37
SHMT2-205ENST00000553474 EIF3AQ14152 1382 aaKnown RBP17.36■□□□□ 0.37
SHMT2-205ENST00000553474 PDE3BQ13370 1112 aa17.35■□□□□ 0.37
SHMT2-205ENST00000553474 SYNMO15061 1565 aa17.35■□□□□ 0.37
SHMT2-205ENST00000553474 RBM19Q9Y4C8 960 aaKnown RBP17.35■□□□□ 0.37
SHMT2-205ENST00000553474 IRX6P78412 446 aaPredicted RBP17.33■□□□□ 0.36
SHMT2-205ENST00000553474 PPP6R1Q9UPN7 881 aa17.33■□□□□ 0.36
SHMT2-205ENST00000553474 PREX1Q8TCU6 1659 aa17.32■□□□□ 0.36
SHMT2-205ENST00000553474 IFT172Q9UG01 1749 aa17.32■□□□□ 0.36
SHMT2-205ENST00000553474 NPATQ14207 1427 aa17.3■□□□□ 0.36
SHMT2-205ENST00000553474 NPC1L1Q9UHC9 1359 aa17.29■□□□□ 0.36
SHMT2-205ENST00000553474 PANK3Q9H999 370 aa17.29■□□□□ 0.36
SHMT2-205ENST00000553474 ZMYM3Q14202 1370 aa17.28■□□□□ 0.36
SHMT2-205ENST00000553474 BLMP54132 1417 aaPredicted RBP17.28■□□□□ 0.36
SHMT2-205ENST00000553474 CEBPAP49715 358 aaPredicted RBP17.28■□□□□ 0.36
SHMT2-205ENST00000553474 CNGB1Q14028 1251 aaPredicted RBP17.28■□□□□ 0.36
SHMT2-205ENST00000553474 KDM5AP29375 1690 aaKnown RBP17.27■□□□□ 0.36
SHMT2-205ENST00000553474 NRXN1Q9ULB1 1477 aa17.27■□□□□ 0.35
SHMT2-205ENST00000553474 PTPRMP28827 1452 aa17.26■□□□□ 0.35
SHMT2-205ENST00000553474 ARHGAP31Q2M1Z3 1444 aa17.26■□□□□ 0.35
SHMT2-205ENST00000553474 MYO3AQ8NEV4 1616 aa17.25■□□□□ 0.35
SHMT2-205ENST00000553474 ERVK-7P63135 1459 aa17.25■□□□□ 0.35
SHMT2-205ENST00000553474 KDM4FA0A1W2PPD8 638 aa17.25■□□□□ 0.35
SHMT2-205ENST00000553474 FANCIQ9NVI1 1328 aa17.25■□□□□ 0.35
SHMT2-205ENST00000553474 SBNO2Q9Y2G9 1366 aa17.24■□□□□ 0.35
SHMT2-205ENST00000553474 SETBP1Q9Y6X0 1596 aa17.24■□□□□ 0.35
SHMT2-205ENST00000553474 MYOM1P52179 1685 aa17.24■□□□□ 0.35
SHMT2-205ENST00000553474 FBXO31Q5XUX0 539 aaPredicted RBP17.24■□□□□ 0.35
SHMT2-205ENST00000553474 UGGT1Q9NYU2 1555 aa17.24■□□□□ 0.35
SHMT2-205ENST00000553474 KNSTRNQ9Y448 316 aa17.23■□□□□ 0.35
SHMT2-205ENST00000553474 ADGRB3O60242 1522 aa17.23■□□□□ 0.35
SHMT2-205ENST00000553474 ASXL1Q8IXJ9 1541 aa17.23■□□□□ 0.35
SHMT2-205ENST00000553474 SPATA31D1Q6ZQQ2 1576 aa17.23■□□□□ 0.35
SHMT2-205ENST00000553474 PIK3C2GO75747 1445 aa17.21■□□□□ 0.34
SHMT2-205ENST00000553474 CC2D1BQ5T0F9 858 aaKnown RBP17.2■□□□□ 0.34
SHMT2-205ENST00000553474 B4GALNT3Q6L9W6 998 aa17.2■□□□□ 0.34
SHMT2-205ENST00000553474 ANP32EQ9BTT0 268 aa17.2■□□□□ 0.34
SHMT2-205ENST00000553474 NOS1P29475 1434 aa17.19■□□□□ 0.34
SHMT2-205ENST00000553474 TNRQ92752 1358 aa17.18■□□□□ 0.34
SHMT2-205ENST00000553474 PPLO60437 1756 aa17.18■□□□□ 0.34
SHMT2-205ENST00000553474 MYO5BQ9ULV0 1848 aa17.18■□□□□ 0.34
SHMT2-205ENST00000553474 AMER1Q5JTC6 1135 aaPredicted RBP17.17■□□□□ 0.34
SHMT2-205ENST00000553474 PIK3C2BO00750 1634 aa17.17■□□□□ 0.34
SHMT2-205ENST00000553474 RPGRIP1LQ68CZ1 1315 aa17.17■□□□□ 0.34
SHMT2-205ENST00000553474 CCDC136Q96JN2 1154 aa17.17■□□□□ 0.34
SHMT2-205ENST00000553474 RCAN3Q9UKA8 241 aa17.17■□□□□ 0.34
SHMT2-205ENST00000553474 RRP1P56182 461 aaKnown RBP17.16■□□□□ 0.34
SHMT2-205ENST00000553474 SETD1BQ9UPS6 1966 aaKnown RBP17.14■□□□□ 0.33
SHMT2-205ENST00000553474 PRKCSHP14314 528 aaPredicted RBP17.14■□□□□ 0.33
SHMT2-205ENST00000553474 PPP2R1AP30153 589 aa17.13■□□□□ 0.33
SHMT2-205ENST00000553474 ZNF142P52746 1687 aaPredicted RBP17.12■□□□□ 0.33
SHMT2-205ENST00000553474 CHGAP10645 457 aaKnown RBP17.12■□□□□ 0.33
SHMT2-205ENST00000553474 CEP170BQ9Y4F5 1589 aaPredicted RBP17.12■□□□□ 0.33
SHMT2-205ENST00000553474 ADGRF5Q8IZF2 1346 aa17.11■□□□□ 0.33
SHMT2-205ENST00000553474 UBR1Q8IWV7 1749 aa17.11■□□□□ 0.33
SHMT2-205ENST00000553474 WDR43Q15061 677 aaKnown RBP eCLIP17.11■□□□□ 0.33
SHMT2-205ENST00000553474 CFAP70Q5T0N1 1121 aa17.11■□□□□ 0.33
SHMT2-205ENST00000553474 NGEFQ8N5V2 710 aa17.11■□□□□ 0.33
SHMT2-205ENST00000553474 NLRP1Q9C000 1473 aa17.1■□□□□ 0.33
SHMT2-205ENST00000553474 IDI1Q13907 227 aa17.09■□□□□ 0.33
SHMT2-205ENST00000553474 STAG3Q9UJ98 1225 aa17.09■□□□□ 0.33
SHMT2-205ENST00000553474 TMEM131LA2VDJ0 1609 aa17.09■□□□□ 0.33
SHMT2-205ENST00000553474 ADGRB1O14514 1584 aa17.08■□□□□ 0.32
SHMT2-205ENST00000553474 ERICH6Q7L0X2 663 aa17.07■□□□□ 0.32
SHMT2-205ENST00000553474 PUS7Q96PZ0 661 aaKnown RBP17.07■□□□□ 0.32
SHMT2-205ENST00000553474 C14orf93Q9H972 538 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms