RNA–Protein interactions for RNA: ENST00000553265.5

PRKCH-204, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-204ENST00000553265 SMAPO00193 183 aa11.45□□□□□ -0.58
PRKCH-204ENST00000553265 DDRGK1Q96HY6 314 aa11.45□□□□□ -0.58
PRKCH-204ENST00000553265 KCNH8Q96L42 1107 aa11.45□□□□□ -0.58
PRKCH-204ENST00000553265 NBPF26B4DH59 902 aa11.43□□□□□ -0.58
PRKCH-204ENST00000553265 DMRTA1Q5VZB9 504 aa11.43□□□□□ -0.58
PRKCH-204ENST00000553265 EYA1Q99502 592 aa11.43□□□□□ -0.58
PRKCH-204ENST00000553265 ZBED2Q9BTP6 218 aa11.43□□□□□ -0.58
PRKCH-204ENST00000553265 RCCD1A6NED2 376 aa11.42□□□□□ -0.58
PRKCH-204ENST00000553265 SSTR3P32745 418 aaPredicted RBP11.42□□□□□ -0.58
PRKCH-204ENST00000553265 TATDN2Q93075 761 aa11.42□□□□□ -0.58
PRKCH-204ENST00000553265 FAM217BQ9NTX9 383 aaPredicted RBP11.42□□□□□ -0.58
PRKCH-204ENST00000553265 TIMELESSQ9UNS1 1208 aa11.42□□□□□ -0.58
PRKCH-204ENST00000553265 CEP164Q9UPV0 1460 aa11.4□□□□□ -0.58
PRKCH-204ENST00000553265 PACS2Q86VP3 889 aa11.4□□□□□ -0.58
PRKCH-204ENST00000553265 POTEB3A0JP26 581 aa11.39□□□□□ -0.59
PRKCH-204ENST00000553265 ARHGAP33O14559 1287 aa11.39□□□□□ -0.59
PRKCH-204ENST00000553265 POTEBQ6S5H4 581 aa11.39□□□□□ -0.59
PRKCH-204ENST00000553265 KIAA1468Q9P260 1216 aa11.39□□□□□ -0.59
PRKCH-204ENST00000553265 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.38□□□□□ -0.59
PRKCH-204ENST00000553265 LCE2DQ5TA82 110 aaPredicted RBP11.38□□□□□ -0.59
PRKCH-204ENST00000553265 HS3ST6Q96QI5 342 aa11.38□□□□□ -0.59
PRKCH-204ENST00000553265 BEGAINQ9BUH8 593 aa11.38□□□□□ -0.59
PRKCH-204ENST00000553265 DAXXQ9UER7 740 aaPredicted RBP11.38□□□□□ -0.59
PRKCH-204ENST00000553265 FANCD2Q9BXW9 1451 aa11.38□□□□□ -0.59
PRKCH-204ENST00000553265 TOP2AP11388 1531 aaKnown RBP11.37□□□□□ -0.59
PRKCH-204ENST00000553265 SEPT9Q9UHD8 586 aaPredicted RBP11.37□□□□□ -0.59
PRKCH-204ENST00000553265 CFTRP13569 1480 aa11.37□□□□□ -0.59
PRKCH-204ENST00000553265 PRDM2Q13029 1718 aa11.36□□□□□ -0.59
PRKCH-204ENST00000553265 DNAJB2P25686 324 aa11.36□□□□□ -0.59
PRKCH-204ENST00000553265 ZNF687Q8N1G0 1237 aa11.35□□□□□ -0.59
PRKCH-204ENST00000553265 PBX2P40425 430 aa11.33□□□□□ -0.6
PRKCH-204ENST00000553265 TMEM134Q9H6X4 195 aa11.33□□□□□ -0.6
PRKCH-204ENST00000553265 URB2Q14146 1524 aaKnown RBP11.33□□□□□ -0.6
PRKCH-204ENST00000553265 RSF1Q96T23 1441 aaPredicted RBP11.33□□□□□ -0.6
PRKCH-204ENST00000553265 DDX11L8A8MPP1 907 aa11.32□□□□□ -0.6
PRKCH-204ENST00000553265 ONECUT3O60422 494 aaPredicted RBP11.32□□□□□ -0.6
PRKCH-204ENST00000553265 RABGEF1Q9UJ41 708 aa11.31□□□□□ -0.6
PRKCH-204ENST00000553265 C14orf37Q86TY3 774 aa11.3□□□□□ -0.6
PRKCH-204ENST00000553265 VPS9D1Q9Y2B5 631 aa11.3□□□□□ -0.6
PRKCH-204ENST00000553265 CD46P15529 392 aa11.28□□□□□ -0.6
PRKCH-204ENST00000553265 SH3D19Q5HYK7 790 aa11.28□□□□□ -0.6
PRKCH-204ENST00000553265 SWT1Q5T5J6 900 aaKnown RBP11.28□□□□□ -0.6
PRKCH-204ENST00000553265 SLC4A5Q9BY07 1137 aa11.28□□□□□ -0.6
PRKCH-204ENST00000553265 RDH13Q8NBN7 331 aa11.27□□□□□ -0.61
PRKCH-204ENST00000553265 PCMTD1Q96MG8 357 aaPredicted RBP11.27□□□□□ -0.61
PRKCH-204ENST00000553265 POLR3EQ9NVU0 708 aa11.27□□□□□ -0.61
PRKCH-204ENST00000553265 SULF1Q8IWU6 871 aa11.26□□□□□ -0.61
PRKCH-204ENST00000553265 TBC1D2Q9BYX2 928 aa11.26□□□□□ -0.61
PRKCH-204ENST00000553265 ATP1B4Q9UN42 357 aaPredicted RBP11.26□□□□□ -0.61
PRKCH-204ENST00000553265 MYSM1Q5VVJ2 828 aa11.25□□□□□ -0.61
PRKCH-204ENST00000553265 GOPCQ9HD26 462 aa11.24□□□□□ -0.61
PRKCH-204ENST00000553265 LSM11P83369 360 aaKnown RBP eCLIP11.23□□□□□ -0.61
PRKCH-204ENST00000553265 FAM98CQ17RN3 349 aaKnown RBP11.23□□□□□ -0.61
PRKCH-204ENST00000553265 PROCA1Q8NCQ7 364 aaPredicted RBP11.23□□□□□ -0.61
PRKCH-204ENST00000553265 SPIRE2Q8WWL2 714 aa11.23□□□□□ -0.61
PRKCH-204ENST00000553265 RSPH6AQ9H0K4 717 aa11.23□□□□□ -0.61
PRKCH-204ENST00000553265 RNF40O75150 1001 aa11.22□□□□□ -0.61
PRKCH-204ENST00000553265 SKIV2LQ15477 1246 aaKnown RBP11.22□□□□□ -0.61
PRKCH-204ENST00000553265 SAMD7Q7Z3H4 446 aa11.22□□□□□ -0.61
PRKCH-204ENST00000553265 CLK2P49760 499 aaKnown RBP11.21□□□□□ -0.61
PRKCH-204ENST00000553265 ADGRD1Q6QNK2 874 aa11.21□□□□□ -0.61
PRKCH-204ENST00000553265 NBPF3Q9H094 633 aa11.21□□□□□ -0.61
PRKCH-204ENST00000553265 BHMG1C9JSJ3 638 aaPredicted RBP11.2□□□□□ -0.62
PRKCH-204ENST00000553265 SLC10A3P09131 477 aa11.2□□□□□ -0.62
PRKCH-204ENST00000553265 NUTM1Q86Y26 1132 aa11.2□□□□□ -0.62
PRKCH-204ENST00000553265 ZNF608Q9ULD9 1512 aaPredicted RBP11.19□□□□□ -0.62
PRKCH-204ENST00000553265 LIMD1Q9UGP4 676 aa11.19□□□□□ -0.62
PRKCH-204ENST00000553265 RIMBP3CA6NJZ7 1639 aa11.19□□□□□ -0.62
PRKCH-204ENST00000553265 RIMBP3BA6NNM3 1639 aa11.19□□□□□ -0.62
PRKCH-204ENST00000553265 RIMBP3Q9UFD9 1639 aa11.19□□□□□ -0.62
PRKCH-204ENST00000553265 EIF4G3O43432 1585 aaKnown RBP11.19□□□□□ -0.62
PRKCH-204ENST00000553265 TK2O00142 265 aa11.18□□□□□ -0.62
PRKCH-204ENST00000553265 ANKRD13DQ6ZTN6 518 aa11.18□□□□□ -0.62
PRKCH-204ENST00000553265 MRPL50Q8N5N7 158 aaKnown RBP11.18□□□□□ -0.62
PRKCH-204ENST00000553265 CCDC88BA6NC98 1476 aa11.18□□□□□ -0.62
PRKCH-204ENST00000553265 ZFRQ96KR1 1074 aaKnown RBP11.17□□□□□ -0.62
PRKCH-204ENST00000553265 TOPBP1Q92547 1522 aa11.17□□□□□ -0.62
PRKCH-204ENST00000553265 IFT140Q96RY7 1462 aa11.17□□□□□ -0.62
PRKCH-204ENST00000553265 MOXD2PA6NHM9 499 aa11.16□□□□□ -0.62
PRKCH-204ENST00000553265 NDUFV2P19404 249 aa11.16□□□□□ -0.62
PRKCH-204ENST00000553265 HDGFP51858 240 aaKnown RBP11.16□□□□□ -0.62
PRKCH-204ENST00000553265 CSPP1Q1MSJ5 1256 aa11.16□□□□□ -0.62
PRKCH-204ENST00000553265 LAPTM4BQ86VI4 370 aa11.16□□□□□ -0.62
PRKCH-204ENST00000553265 DIXDC1Q155Q3 683 aa11.15□□□□□ -0.62
PRKCH-204ENST00000553265 FBXO31Q5XUX0 539 aaPredicted RBP11.15□□□□□ -0.62
PRKCH-204ENST00000553265 RIC3Q7Z5B4 369 aa11.15□□□□□ -0.62
PRKCH-204ENST00000553265 DNMBPQ6XZF7 1577 aa11.15□□□□□ -0.62
PRKCH-204ENST00000553265 HRO43593 1189 aa11.14□□□□□ -0.63
PRKCH-204ENST00000553265 KDM4AO75164 1064 aa11.14□□□□□ -0.63
PRKCH-204ENST00000553265 GCGRP47871 477 aa11.14□□□□□ -0.63
PRKCH-204ENST00000553265 ERICH6Q7L0X2 663 aa11.14□□□□□ -0.63
PRKCH-204ENST00000553265 HLA-CQ95604 372 aa11.14□□□□□ -0.63
PRKCH-204ENST00000553265 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.14□□□□□ -0.63
PRKCH-204ENST00000553265 TARBP1Q13395 1621 aaKnown RBP11.13□□□□□ -0.63
PRKCH-204ENST00000553265 RSBN1LQ6PCB5 846 aaPredicted RBP11.13□□□□□ -0.63
PRKCH-204ENST00000553265 SLF2Q8IX21 1173 aa11.13□□□□□ -0.63
PRKCH-204ENST00000553265 ARHGEF11O15085 1522 aa11.13□□□□□ -0.63
PRKCH-204ENST00000553265 CFHP08603 1231 aa11.12□□□□□ -0.63
PRKCH-204ENST00000553265 GUCA2AQ02747 115 aa11.12□□□□□ -0.63
PRKCH-204ENST00000553265 CHD1O14646 1710 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms