RNA–Protein interactions for RNA: ENST00000553038.5

ACTR6-213, Transcript of ARP6 actin related protein 6 homolog, humanhuman

TSL 1 (best)

Gene ACTR6, Length 2,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR6-213ENST00000553038 PLPPR3Q6T4P5 718 aa19.59■□□□□ 0.73
ACTR6-213ENST00000553038 CCDC7Q96M83 1385 aa19.59■□□□□ 0.73
ACTR6-213ENST00000553038 POLR3GLQ9BT43 218 aa19.58■□□□□ 0.73
ACTR6-213ENST00000553038 ADGRF5Q8IZF2 1346 aa19.58■□□□□ 0.72
ACTR6-213ENST00000553038 MYOM2P54296 1465 aa19.57■□□□□ 0.72
ACTR6-213ENST00000553038 RPGRIP1LQ68CZ1 1315 aa19.57■□□□□ 0.72
ACTR6-213ENST00000553038 NUTM2DQ5VT03 806 aaPredicted RBP19.57■□□□□ 0.72
ACTR6-213ENST00000553038 KIF7Q2M1P5 1343 aa19.56■□□□□ 0.72
ACTR6-213ENST00000553038 ST20-MTHFSA0A0A6YYL1 179 aa19.55■□□□□ 0.72
ACTR6-213ENST00000553038 IFT172Q9UG01 1749 aa19.55■□□□□ 0.72
ACTR6-213ENST00000553038 SPATA31D1Q6ZQQ2 1576 aa19.54■□□□□ 0.72
ACTR6-213ENST00000553038 GPRASP1Q5JY77 1395 aa19.54■□□□□ 0.72
ACTR6-213ENST00000553038 ANP32CO43423 234 aa19.53■□□□□ 0.72
ACTR6-213ENST00000553038 VGFO15240 615 aaPredicted RBP19.52■□□□□ 0.72
ACTR6-213ENST00000553038 CFAP70Q5T0N1 1121 aa19.52■□□□□ 0.72
ACTR6-213ENST00000553038 PPLO60437 1756 aa19.52■□□□□ 0.72
ACTR6-213ENST00000553038 SENP3Q9H4L4 574 aaPredicted RBP19.52■□□□□ 0.72
ACTR6-213ENST00000553038 LAMC1P11047 1609 aa19.51■□□□□ 0.71
ACTR6-213ENST00000553038 TNRQ92752 1358 aa19.5■□□□□ 0.71
ACTR6-213ENST00000553038 TMEM131LA2VDJ0 1609 aa19.5■□□□□ 0.71
ACTR6-213ENST00000553038 CEBPAP49715 358 aaPredicted RBP19.49■□□□□ 0.71
ACTR6-213ENST00000553038 FER1L4A9Z1Z3 1794 aa19.49■□□□□ 0.71
ACTR6-213ENST00000553038 POLR1AO95602 1720 aaPredicted RBP19.49■□□□□ 0.71
ACTR6-213ENST00000553038 GTF3C3Q9Y5Q9 886 aa19.49■□□□□ 0.71
ACTR6-213ENST00000553038 MYO5BQ9ULV0 1848 aa19.49■□□□□ 0.71
ACTR6-213ENST00000553038 NEXMIFQ5QGS0 1516 aa19.48■□□□□ 0.71
ACTR6-213ENST00000553038 KIAA1210Q9ULL0 1709 aa19.47■□□□□ 0.71
ACTR6-213ENST00000553038 NRXN1Q9ULB1 1477 aa19.47■□□□□ 0.71
ACTR6-213ENST00000553038 PIK3C2GO75747 1445 aa19.46■□□□□ 0.71
ACTR6-213ENST00000553038 EIF3AQ14152 1382 aaKnown RBP19.45■□□□□ 0.7
ACTR6-213ENST00000553038 SCAF11Q99590 1463 aaKnown RBP19.45■□□□□ 0.7
ACTR6-213ENST00000553038 CCER2I3L3R5 266 aa19.43■□□□□ 0.7
ACTR6-213ENST00000553038 A2ML1A8K2U0 1454 aa19.42■□□□□ 0.7
ACTR6-213ENST00000553038 C14orf93Q9H972 538 aaKnown RBP19.42■□□□□ 0.7
ACTR6-213ENST00000553038 C3P01024 1663 aa19.41■□□□□ 0.7
ACTR6-213ENST00000553038 IQGAP1P46940 1657 aa19.41■□□□□ 0.7
ACTR6-213ENST00000553038 TMF1P82094 1093 aa19.41■□□□□ 0.7
ACTR6-213ENST00000553038 TMEM132EQ6IEE7 984 aa19.41■□□□□ 0.7
ACTR6-213ENST00000553038 RIMS2Q9UQ26 1411 aa19.4■□□□□ 0.7
ACTR6-213ENST00000553038 TRAK1Q9UPV9 953 aa19.39■□□□□ 0.69
ACTR6-213ENST00000553038 ZFYVE9O95405 1425 aa19.39■□□□□ 0.69
ACTR6-213ENST00000553038 HDGFP51858 240 aaKnown RBP19.38■□□□□ 0.69
ACTR6-213ENST00000553038 BCANQ96GW7 911 aa19.38■□□□□ 0.69
ACTR6-213ENST00000553038 TESK2Q96S53 571 aa19.37■□□□□ 0.69
ACTR6-213ENST00000553038 SETBP1Q9Y6X0 1596 aa19.37■□□□□ 0.69
ACTR6-213ENST00000553038 RIMS1Q86UR5 1692 aaKnown RBP19.37■□□□□ 0.69
ACTR6-213ENST00000553038 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.37■□□□□ 0.69
ACTR6-213ENST00000553038 NLRP1Q9C000 1473 aa19.36■□□□□ 0.69
ACTR6-213ENST00000553038 DISP3Q9P2K9 1392 aa19.34■□□□□ 0.69
ACTR6-213ENST00000553038 PRKRIP1Q9H875 184 aaPredicted RBP19.34■□□□□ 0.69
ACTR6-213ENST00000553038 STK26Q9P289 416 aa19.34■□□□□ 0.69
ACTR6-213ENST00000553038 CNGB1Q14028 1251 aaPredicted RBP19.33■□□□□ 0.68
ACTR6-213ENST00000553038 UBR1Q8IWV7 1749 aa19.32■□□□□ 0.68
ACTR6-213ENST00000553038 ADGRB1O14514 1584 aa19.32■□□□□ 0.68
ACTR6-213ENST00000553038 CCDC184Q52MB2 194 aa19.32■□□□□ 0.68
ACTR6-213ENST00000553038 CENPJQ9HC77 1338 aaPredicted RBP19.32■□□□□ 0.68
ACTR6-213ENST00000553038 CDCA8Q53HL2 280 aa19.31■□□□□ 0.68
ACTR6-213ENST00000553038 TMEM2Q9UHN6 1383 aa19.3■□□□□ 0.68
ACTR6-213ENST00000553038 KDM5AP29375 1690 aaKnown RBP19.29■□□□□ 0.68
ACTR6-213ENST00000553038 SLC24A1O60721 1099 aa19.29■□□□□ 0.68
ACTR6-213ENST00000553038 EID1Q9Y6B2 187 aa19.29■□□□□ 0.68
ACTR6-213ENST00000553038 ALKQ9UM73 1620 aa19.28■□□□□ 0.68
ACTR6-213ENST00000553038 ADAMTSL3P82987 1691 aa19.28■□□□□ 0.68
ACTR6-213ENST00000553038 MYO3AQ8NEV4 1616 aa19.27■□□□□ 0.67
ACTR6-213ENST00000553038 SAFB2Q14151 953 aaKnown RBP eCLIP19.26■□□□□ 0.67
ACTR6-213ENST00000553038 TXNDC2Q86VQ3 553 aa19.26■□□□□ 0.67
ACTR6-213ENST00000553038 THEMISQ8N1K5 641 aaPredicted RBP19.26■□□□□ 0.67
ACTR6-213ENST00000553038 POGKQ9P215 609 aa19.24■□□□□ 0.67
ACTR6-213ENST00000553038 YTHDC2Q9H6S0 1430 aaKnown RBP19.24■□□□□ 0.67
ACTR6-213ENST00000553038 ASXL1Q8IXJ9 1541 aa19.24■□□□□ 0.67
ACTR6-213ENST00000553038 QRICH2Q9H0J4 1663 aa19.23■□□□□ 0.67
ACTR6-213ENST00000553038 ARHGEF28Q8N1W1 1705 aaKnown RBP19.21■□□□□ 0.67
ACTR6-213ENST00000553038 LTKP29376 864 aa19.2■□□□□ 0.66
ACTR6-213ENST00000553038 PRAM1Q96QH2 718 aa19.2■□□□□ 0.66
ACTR6-213ENST00000553038 CEP170BQ9Y4F5 1589 aaPredicted RBP19.2■□□□□ 0.66
ACTR6-213ENST00000553038 PANK3Q9H999 370 aa19.2■□□□□ 0.66
ACTR6-213ENST00000553038 SBNO2Q9Y2G9 1366 aa19.19■□□□□ 0.66
ACTR6-213ENST00000553038 PTPRMP28827 1452 aa19.19■□□□□ 0.66
ACTR6-213ENST00000553038 PLEKHG1Q9ULL1 1385 aa19.18■□□□□ 0.66
ACTR6-213ENST00000553038 PER1O15534 1290 aaPredicted RBP19.18■□□□□ 0.66
ACTR6-213ENST00000553038 EVC2Q86UK5 1308 aa19.18■□□□□ 0.66
ACTR6-213ENST00000553038 NRXN3Q9Y4C0 1643 aa19.17■□□□□ 0.66
ACTR6-213ENST00000553038 MRS2Q9HD23 443 aa19.17■□□□□ 0.66
ACTR6-213ENST00000553038 SLIT1O75093 1534 aa19.17■□□□□ 0.66
ACTR6-213ENST00000553038 MINK1Q8N4C8 1332 aaPredicted RBP19.16■□□□□ 0.66
ACTR6-213ENST00000553038 METP08581 1390 aa19.16■□□□□ 0.66
ACTR6-213ENST00000553038 LRPPRCP42704 1394 aaKnown RBP19.16■□□□□ 0.66
ACTR6-213ENST00000553038 SLC26A8Q96RN1 970 aa19.16■□□□□ 0.66
ACTR6-213ENST00000553038 TMC1Q8TDI8 760 aa19.15■□□□□ 0.66
ACTR6-213ENST00000553038 ARHGAP23Q9P227 1491 aa19.14■□□□□ 0.65
ACTR6-213ENST00000553038 SETD1AO15047 1707 aaKnown RBP19.14■□□□□ 0.65
ACTR6-213ENST00000553038 SRPK2P78362 688 aaKnown RBP19.13■□□□□ 0.65
ACTR6-213ENST00000553038 FAM9BQ8IZU0 186 aa19.13■□□□□ 0.65
ACTR6-213ENST00000553038 WAPLQ7Z5K2 1190 aa19.12■□□□□ 0.65
ACTR6-213ENST00000553038 KNSTRNQ9Y448 316 aa19.12■□□□□ 0.65
ACTR6-213ENST00000553038 KTN1Q86UP2 1357 aaKnown RBP19.11■□□□□ 0.65
ACTR6-213ENST00000553038 CC2D1BQ5T0F9 858 aaKnown RBP19.11■□□□□ 0.65
ACTR6-213ENST00000553038 CABP2Q9NPB3 220 aa19.11■□□□□ 0.65
ACTR6-213ENST00000553038 ABCC11Q96J66 1382 aa19.11■□□□□ 0.65
ACTR6-213ENST00000553038 ADAMTS13Q76LX8 1427 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms