RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 AMER1Q5JTC6 1135 aaPredicted RBP14.68□□□□□ -0.06
PPFIA2-227ENST00000552948 VSIG10Q8N0Z9 540 aa14.68□□□□□ -0.06
PPFIA2-227ENST00000552948 TBC1D2Q9BYX2 928 aa14.68□□□□□ -0.06
PPFIA2-227ENST00000552948 TNNQ9UQP3 1299 aa14.68□□□□□ -0.06
PPFIA2-227ENST00000552948 CFAP53Q96M91 514 aa14.68□□□□□ -0.06
PPFIA2-227ENST00000552948 RRAGDQ9NQL2 400 aaPredicted RBP14.68□□□□□ -0.06
PPFIA2-227ENST00000552948 ANP32BQ92688 251 aaKnown RBP14.67□□□□□ -0.06
PPFIA2-227ENST00000552948 PANK2Q9BZ23 570 aa14.67□□□□□ -0.06
PPFIA2-227ENST00000552948 ZNF608Q9ULD9 1512 aaPredicted RBP14.67□□□□□ -0.06
PPFIA2-227ENST00000552948 RSPH4AQ5TD94 716 aa14.67□□□□□ -0.06
PPFIA2-227ENST00000552948 NCLP19338 710 aaKnown RBP14.67□□□□□ -0.06
PPFIA2-227ENST00000552948 TRAK2O60296 914 aa14.66□□□□□ -0.06
PPFIA2-227ENST00000552948 C22orf23Q9BZE7 217 aa14.66□□□□□ -0.06
PPFIA2-227ENST00000552948 TCP11L2Q8N4U5 519 aa14.66□□□□□ -0.06
PPFIA2-227ENST00000552948 SMC4Q9NTJ3 1288 aa14.66□□□□□ -0.06
PPFIA2-227ENST00000552948 EIF3AQ14152 1382 aaKnown RBP14.66□□□□□ -0.06
PPFIA2-227ENST00000552948 BLMP54132 1417 aaPredicted RBP14.66□□□□□ -0.06
PPFIA2-227ENST00000552948 PLEKHH2Q8IVE3 1493 aa14.66□□□□□ -0.06
PPFIA2-227ENST00000552948 HSP90AA2PQ14568 343 aaPredicted RBP14.66□□□□□ -0.06
PPFIA2-227ENST00000552948 WWC1Q8IX03 1113 aa14.66□□□□□ -0.06
PPFIA2-227ENST00000552948 MCM4P33991 863 aa14.65□□□□□ -0.06
PPFIA2-227ENST00000552948 CFAP70Q5T0N1 1121 aa14.65□□□□□ -0.06
PPFIA2-227ENST00000552948 CHMP5Q9NZZ3 219 aa14.65□□□□□ -0.06
PPFIA2-227ENST00000552948 SAFB2Q14151 953 aaKnown RBP eCLIP14.65□□□□□ -0.06
PPFIA2-227ENST00000552948 PCDHB15Q9Y5E8 787 aa14.65□□□□□ -0.06
PPFIA2-227ENST00000552948 TRAK1Q9UPV9 953 aa14.64□□□□□ -0.07
PPFIA2-227ENST00000552948 NKTRP30414 1462 aaKnown RBP14.64□□□□□ -0.07
PPFIA2-227ENST00000552948 ARHGEF12Q9NZN5 1544 aa14.63□□□□□ -0.07
PPFIA2-227ENST00000552948 XRCC6P12956 609 aaKnown RBP eCLIP14.63□□□□□ -0.07
PPFIA2-227ENST00000552948 ZMYM4Q5VZL5 1548 aa14.63□□□□□ -0.07
PPFIA2-227ENST00000552948 RAPGEF6Q8TEU7 1601 aa14.62□□□□□ -0.07
PPFIA2-227ENST00000552948 DISP1Q96F81 1524 aa14.62□□□□□ -0.07
PPFIA2-227ENST00000552948 COL17A1Q9UMD9 1497 aaPredicted RBP14.61□□□□□ -0.07
PPFIA2-227ENST00000552948 RLBP1P12271 317 aa14.61□□□□□ -0.07
PPFIA2-227ENST00000552948 RARSP54136 660 aaKnown RBP14.61□□□□□ -0.07
PPFIA2-227ENST00000552948 ZKSCAN2Q63HK3 967 aa14.61□□□□□ -0.07
PPFIA2-227ENST00000552948 RUNDC1Q96C34 613 aa14.6□□□□□ -0.07
PPFIA2-227ENST00000552948 DZIP1LQ8IYY4 767 aaKnown RBP14.6□□□□□ -0.07
PPFIA2-227ENST00000552948 TBC1D32Q96NH3 1257 aa14.6□□□□□ -0.07
PPFIA2-227ENST00000552948 ADGRL2O95490 1459 aa14.6□□□□□ -0.07
PPFIA2-227ENST00000552948 MAGI1Q96QZ7 1491 aaPredicted RBP14.6□□□□□ -0.07
PPFIA2-227ENST00000552948 TSR2Q969E8 191 aaKnown RBP14.6□□□□□ -0.07
PPFIA2-227ENST00000552948 MTHFSP49914 203 aa14.59□□□□□ -0.07
PPFIA2-227ENST00000552948 KIF3BO15066 747 aa14.59□□□□□ -0.07
PPFIA2-227ENST00000552948 LNPKQ9C0E8 428 aa14.59□□□□□ -0.07
PPFIA2-227ENST00000552948 PTPRGP23470 1445 aa14.59□□□□□ -0.07
PPFIA2-227ENST00000552948 SLC12A5Q9H2X9 1139 aa14.58□□□□□ -0.07
PPFIA2-227ENST00000552948 USP19O94966 1318 aa14.58□□□□□ -0.07
PPFIA2-227ENST00000552948 GOLGA6L22H0YM25 854 aa14.58□□□□□ -0.08
PPFIA2-227ENST00000552948 KIF21AQ7Z4S6 1674 aa14.58□□□□□ -0.08
PPFIA2-227ENST00000552948 NUTM2DQ5VT03 806 aaPredicted RBP14.58□□□□□ -0.08
PPFIA2-227ENST00000552948 POLR1AO95602 1720 aaPredicted RBP14.58□□□□□ -0.08
PPFIA2-227ENST00000552948 KIAA0556O60303 1618 aa14.58□□□□□ -0.08
PPFIA2-227ENST00000552948 A2MP01023 1474 aa14.58□□□□□ -0.08
PPFIA2-227ENST00000552948 MRE11P49959 708 aa14.58□□□□□ -0.08
PPFIA2-227ENST00000552948 ZNF521Q96K83 1311 aa14.57□□□□□ -0.08
PPFIA2-227ENST00000552948 GBP4Q96PP9 640 aa14.57□□□□□ -0.08
PPFIA2-227ENST00000552948 ARID3AQ99856 593 aa14.57□□□□□ -0.08
PPFIA2-227ENST00000552948 DDX11L8A8MPP1 907 aa14.57□□□□□ -0.08
PPFIA2-227ENST00000552948 FAM135AQ9P2D6 1515 aa14.57□□□□□ -0.08
PPFIA2-227ENST00000552948 EFCAB2Q5VUJ9 269 aa14.57□□□□□ -0.08
PPFIA2-227ENST00000552948 GRIN2AQ12879 1464 aa14.56□□□□□ -0.08
PPFIA2-227ENST00000552948 AFAP1Q8N556 730 aa14.55□□□□□ -0.08
PPFIA2-227ENST00000552948 GRPEL1Q9HAV7 217 aa14.55□□□□□ -0.08
PPFIA2-227ENST00000552948 ADAMTS12P58397 1594 aa14.55□□□□□ -0.08
PPFIA2-227ENST00000552948 SPAG9O60271 1321 aaKnown RBP14.55□□□□□ -0.08
PPFIA2-227ENST00000552948 ERCC6Q03468 1493 aa14.55□□□□□ -0.08
PPFIA2-227ENST00000552948 MAGI2Q86UL8 1455 aa14.55□□□□□ -0.08
PPFIA2-227ENST00000552948 NGEFQ8N5V2 710 aa14.55□□□□□ -0.08
PPFIA2-227ENST00000552948 CCDC141Q6ZP82 1450 aa14.55□□□□□ -0.08
PPFIA2-227ENST00000552948 ZBTB7CA1YPR0 619 aa14.54□□□□□ -0.08
PPFIA2-227ENST00000552948 EXOSC9Q06265 439 aaKnown RBP14.54□□□□□ -0.08
PPFIA2-227ENST00000552948 MVPQ14764 893 aaKnown RBP14.53□□□□□ -0.08
PPFIA2-227ENST00000552948 ESPNB1AK53 854 aa14.53□□□□□ -0.08
PPFIA2-227ENST00000552948 SLC24A1O60721 1099 aa14.53□□□□□ -0.08
PPFIA2-227ENST00000552948 TMEM132EQ6IEE7 984 aa14.53□□□□□ -0.08
PPFIA2-227ENST00000552948 CARD14Q9BXL6 1004 aa14.53□□□□□ -0.08
PPFIA2-227ENST00000552948 ANKRD45Q5TZF3 282 aa14.53□□□□□ -0.08
PPFIA2-227ENST00000552948 TPRNQ4KMQ1 711 aa14.52□□□□□ -0.08
PPFIA2-227ENST00000552948 GPRASP1Q5JY77 1395 aa14.52□□□□□ -0.08
PPFIA2-227ENST00000552948 ATP10BO94823 1461 aa14.52□□□□□ -0.08
PPFIA2-227ENST00000552948 ITSN2Q9NZM3 1697 aa14.52□□□□□ -0.08
PPFIA2-227ENST00000552948 ELL2O00472 640 aaPredicted RBP14.52□□□□□ -0.08
PPFIA2-227ENST00000552948 ARHGAP5Q13017 1502 aa14.52□□□□□ -0.09
PPFIA2-227ENST00000552948 MRC2Q9UBG0 1479 aa14.51□□□□□ -0.09
PPFIA2-227ENST00000552948 MSNP26038 577 aaKnown RBP14.51□□□□□ -0.09
PPFIA2-227ENST00000552948 TRMT2AQ8IZ69 625 aaKnown RBP14.51□□□□□ -0.09
PPFIA2-227ENST00000552948 APBB1O00213 710 aa14.51□□□□□ -0.09
PPFIA2-227ENST00000552948 PKNOX2Q96KN3 472 aa14.51□□□□□ -0.09
PPFIA2-227ENST00000552948 DDX49Q9Y6V7 483 aaKnown RBP14.51□□□□□ -0.09
PPFIA2-227ENST00000552948 STK26Q9P289 416 aa14.51□□□□□ -0.09
PPFIA2-227ENST00000552948 ANTXR1Q9H6X2 564 aa14.5□□□□□ -0.09
PPFIA2-227ENST00000552948 DDX19BQ9UMR2 479 aa14.5□□□□□ -0.09
PPFIA2-227ENST00000552948 IFT140Q96RY7 1462 aa14.5□□□□□ -0.09
PPFIA2-227ENST00000552948 INSRP06213 1382 aa14.5□□□□□ -0.09
PPFIA2-227ENST00000552948 SRPK2P78362 688 aaKnown RBP14.49□□□□□ -0.09
PPFIA2-227ENST00000552948 KANK1Q14678 1352 aa14.49□□□□□ -0.09
PPFIA2-227ENST00000552948 TARBP1Q13395 1621 aaKnown RBP14.49□□□□□ -0.09
PPFIA2-227ENST00000552948 IPO8O15397 1037 aaKnown RBP14.49□□□□□ -0.09
PPFIA2-227ENST00000552948 NOB1Q9ULX3 412 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms