RNA–Protein interactions for RNA: ENST00000552872.5

MMP19-209, Transcript of matrix metallopeptidase 19, humanhuman

TSL 1 (best)

Gene MMP19, Length 2,350 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-209ENST00000552872 ADGRF5Q8IZF2 1346 aa14.41□□□□□ -0.1
MMP19-209ENST00000552872 SLC52A1Q9NWF4 448 aa14.4□□□□□ -0.1
MMP19-209ENST00000552872 TMEM131LA2VDJ0 1609 aa14.39□□□□□ -0.11
MMP19-209ENST00000552872 ADGRB3O60242 1522 aa14.39□□□□□ -0.11
MMP19-209ENST00000552872 MIER1Q8N108 512 aa14.39□□□□□ -0.11
MMP19-209ENST00000552872 NBPF1Q3BBV0 1214 aa14.38□□□□□ -0.11
MMP19-209ENST00000552872 MYO3AQ8NEV4 1616 aa14.36□□□□□ -0.11
MMP19-209ENST00000552872 A2ML1A8K2U0 1454 aa14.36□□□□□ -0.11
MMP19-209ENST00000552872 DAXXQ9UER7 740 aaPredicted RBP14.36□□□□□ -0.11
MMP19-209ENST00000552872 UBR1Q8IWV7 1749 aa14.35□□□□□ -0.11
MMP19-209ENST00000552872 CFAP70Q5T0N1 1121 aa14.34□□□□□ -0.11
MMP19-209ENST00000552872 PPLO60437 1756 aa14.34□□□□□ -0.11
MMP19-209ENST00000552872 HSPA2P54652 639 aa14.34□□□□□ -0.11
MMP19-209ENST00000552872 BCANQ96GW7 911 aa14.34□□□□□ -0.11
MMP19-209ENST00000552872 TSHZ2Q9NRE2 1034 aa14.33□□□□□ -0.11
MMP19-209ENST00000552872 IFT172Q9UG01 1749 aa14.33□□□□□ -0.12
MMP19-209ENST00000552872 LTKP29376 864 aa14.33□□□□□ -0.12
MMP19-209ENST00000552872 TMEM132EQ6IEE7 984 aa14.33□□□□□ -0.12
MMP19-209ENST00000552872 AEBP2Q6ZN18 517 aaPredicted RBP14.33□□□□□ -0.12
MMP19-209ENST00000552872 TIMELESSQ9UNS1 1208 aa14.33□□□□□ -0.12
MMP19-209ENST00000552872 NEXMIFQ5QGS0 1516 aa14.33□□□□□ -0.12
MMP19-209ENST00000552872 PRAG1Q86YV5 1406 aa14.32□□□□□ -0.12
MMP19-209ENST00000552872 SUPT16HQ9Y5B9 1047 aaKnown RBP14.32□□□□□ -0.12
MMP19-209ENST00000552872 RIMS2Q9UQ26 1411 aa14.31□□□□□ -0.12
MMP19-209ENST00000552872 CEP170BQ9Y4F5 1589 aaPredicted RBP14.3□□□□□ -0.12
MMP19-209ENST00000552872 SETD1BQ9UPS6 1966 aaKnown RBP14.29□□□□□ -0.12
MMP19-209ENST00000552872 ROCK2O75116 1388 aaKnown RBP14.29□□□□□ -0.12
MMP19-209ENST00000552872 TXNDC2Q86VQ3 553 aa14.29□□□□□ -0.12
MMP19-209ENST00000552872 CARD11Q9BXL7 1154 aa14.29□□□□□ -0.12
MMP19-209ENST00000552872 NLRP1Q9C000 1473 aa14.28□□□□□ -0.12
MMP19-209ENST00000552872 SLC26A8Q96RN1 970 aa14.28□□□□□ -0.12
MMP19-209ENST00000552872 TMEM2Q9UHN6 1383 aa14.28□□□□□ -0.12
MMP19-209ENST00000552872 TRPM1Q7Z4N2 1603 aa14.28□□□□□ -0.12
MMP19-209ENST00000552872 STK26Q9P289 416 aa14.27□□□□□ -0.12
MMP19-209ENST00000552872 UHRF1BP1Q6BDS2 1440 aa14.26□□□□□ -0.13
MMP19-209ENST00000552872 VGFO15240 615 aaPredicted RBP14.26□□□□□ -0.13
MMP19-209ENST00000552872 NCKAP5LQ9HCH0 1330 aa14.26□□□□□ -0.13
MMP19-209ENST00000552872 ZFYVE9O95405 1425 aa14.26□□□□□ -0.13
MMP19-209ENST00000552872 HSPA5P11021 654 aaKnown RBP14.25□□□□□ -0.13
MMP19-209ENST00000552872 THEMISQ8N1K5 641 aaPredicted RBP14.25□□□□□ -0.13
MMP19-209ENST00000552872 SAFB2Q14151 953 aaKnown RBP eCLIP14.24□□□□□ -0.13
MMP19-209ENST00000552872 PIK3C2GO75747 1445 aa14.24□□□□□ -0.13
MMP19-209ENST00000552872 TRAK1Q9UPV9 953 aa14.24□□□□□ -0.13
MMP19-209ENST00000552872 IQGAP1P46940 1657 aa14.23□□□□□ -0.13
MMP19-209ENST00000552872 MYOM2P54296 1465 aa14.23□□□□□ -0.13
MMP19-209ENST00000552872 RPGRIP1LQ68CZ1 1315 aa14.23□□□□□ -0.13
MMP19-209ENST00000552872 RALGAPBQ86X10 1494 aa14.23□□□□□ -0.13
MMP19-209ENST00000552872 NEURL4Q96JN8 1562 aa14.22□□□□□ -0.13
MMP19-209ENST00000552872 ZNF142P52746 1687 aaPredicted RBP14.22□□□□□ -0.13
MMP19-209ENST00000552872 POLR3GLQ9BT43 218 aa14.22□□□□□ -0.13
MMP19-209ENST00000552872 EID1Q9Y6B2 187 aa14.22□□□□□ -0.13
MMP19-209ENST00000552872 USP47Q96K76 1375 aa14.21□□□□□ -0.13
MMP19-209ENST00000552872 ST20-MTHFSA0A0A6YYL1 179 aa14.21□□□□□ -0.13
MMP19-209ENST00000552872 NRXN1Q9ULB1 1477 aa14.21□□□□□ -0.13
MMP19-209ENST00000552872 C14orf93Q9H972 538 aaKnown RBP14.2□□□□□ -0.14
MMP19-209ENST00000552872 RBM33Q96EV2 1170 aaKnown RBP14.2□□□□□ -0.14
MMP19-209ENST00000552872 NRXN3Q9Y4C0 1643 aa14.2□□□□□ -0.14
MMP19-209ENST00000552872 METP08581 1390 aa14.2□□□□□ -0.14
MMP19-209ENST00000552872 EIF4G2P78344 907 aaKnown RBP eCLIP14.19□□□□□ -0.14
MMP19-209ENST00000552872 ALKQ9UM73 1620 aa14.19□□□□□ -0.14
MMP19-209ENST00000552872 C11orf95C9JLR9 678 aaPredicted RBP14.19□□□□□ -0.14
MMP19-209ENST00000552872 LMTK3Q96Q04 1460 aa14.19□□□□□ -0.14
MMP19-209ENST00000552872 KDM5AP29375 1690 aaKnown RBP14.18□□□□□ -0.14
MMP19-209ENST00000552872 ASXL1Q8IXJ9 1541 aa14.18□□□□□ -0.14
MMP19-209ENST00000552872 SLIT1O75093 1534 aa14.18□□□□□ -0.14
MMP19-209ENST00000552872 ANKLE2Q86XL3 938 aa14.18□□□□□ -0.14
MMP19-209ENST00000552872 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.18□□□□□ -0.14
MMP19-209ENST00000552872 SCAF11Q99590 1463 aaKnown RBP14.18□□□□□ -0.14
MMP19-209ENST00000552872 ARHGAP23Q9P227 1491 aa14.17□□□□□ -0.14
MMP19-209ENST00000552872 WAPLQ7Z5K2 1190 aa14.16□□□□□ -0.14
MMP19-209ENST00000552872 ADGRB1O14514 1584 aa14.15□□□□□ -0.14
MMP19-209ENST00000552872 HDGFP51858 240 aaKnown RBP14.15□□□□□ -0.14
MMP19-209ENST00000552872 ADAMTS13Q76LX8 1427 aa14.15□□□□□ -0.14
MMP19-209ENST00000552872 SETD1AO15047 1707 aaKnown RBP14.15□□□□□ -0.14
MMP19-209ENST00000552872 PLEKHG1Q9ULL1 1385 aa14.14□□□□□ -0.15
MMP19-209ENST00000552872 EIF5BO60841 1220 aaKnown RBP14.14□□□□□ -0.15
MMP19-209ENST00000552872 POLR1AO95602 1720 aaPredicted RBP14.13□□□□□ -0.15
MMP19-209ENST00000552872 PRAM1Q96QH2 718 aa14.12□□□□□ -0.15
MMP19-209ENST00000552872 GPRASP1Q5JY77 1395 aa14.12□□□□□ -0.15
MMP19-209ENST00000552872 KIAA1210Q9ULL0 1709 aa14.12□□□□□ -0.15
MMP19-209ENST00000552872 STAC3Q96MF2 364 aa14.12□□□□□ -0.15
MMP19-209ENST00000552872 PLEKHH1Q9ULM0 1364 aa14.12□□□□□ -0.15
MMP19-209ENST00000552872 CNGB1Q14028 1251 aaPredicted RBP14.11□□□□□ -0.15
MMP19-209ENST00000552872 YTHDC2Q9H6S0 1430 aaKnown RBP14.11□□□□□ -0.15
MMP19-209ENST00000552872 SETBP1Q9Y6X0 1596 aa14.11□□□□□ -0.15
MMP19-209ENST00000552872 PTPRUQ92729 1446 aa14.11□□□□□ -0.15
MMP19-209ENST00000552872 MINK1Q8N4C8 1332 aaPredicted RBP14.1□□□□□ -0.15
MMP19-209ENST00000552872 NPHP4O75161 1426 aaPredicted RBP14.1□□□□□ -0.15
MMP19-209ENST00000552872 STRCQ7RTU9 1775 aa14.1□□□□□ -0.15
MMP19-209ENST00000552872 DDX10Q13206 875 aaKnown RBP14.1□□□□□ -0.15
MMP19-209ENST00000552872 DISP3Q9P2K9 1392 aa14.09□□□□□ -0.15
MMP19-209ENST00000552872 WASHC2AQ641Q2 1341 aa14.09□□□□□ -0.15
MMP19-209ENST00000552872 AMOTL2Q9Y2J4 779 aa14.09□□□□□ -0.15
MMP19-209ENST00000552872 LAMC1P11047 1609 aa14.09□□□□□ -0.15
MMP19-209ENST00000552872 TESK2Q96S53 571 aa14.09□□□□□ -0.15
MMP19-209ENST00000552872 POGKQ9P215 609 aa14.09□□□□□ -0.15
MMP19-209ENST00000552872 ARHGEF28Q8N1W1 1705 aaKnown RBP14.09□□□□□ -0.15
MMP19-209ENST00000552872 KCNA6P17658 529 aa14.08□□□□□ -0.16
MMP19-209ENST00000552872 NUTM2FA1L443 756 aa14.08□□□□□ -0.16
MMP19-209ENST00000552872 ROBO2Q9HCK4 1378 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms