RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 BCANQ96GW7 911 aa13.45□□□□□ -0.26
TMEM116-217ENST00000552801 PRDM15P57071 1507 aaPredicted RBP13.45□□□□□ -0.26
TMEM116-217ENST00000552801 FGD6Q6ZV73 1430 aa13.45□□□□□ -0.26
TMEM116-217ENST00000552801 FAM50AQ14320 339 aaKnown RBP13.45□□□□□ -0.26
TMEM116-217ENST00000552801 ARHGAP31Q2M1Z3 1444 aa13.43□□□□□ -0.26
TMEM116-217ENST00000552801 MED1Q15648 1581 aaPredicted RBP13.41□□□□□ -0.26
TMEM116-217ENST00000552801 LRRC7Q96NW7 1537 aa13.41□□□□□ -0.26
TMEM116-217ENST00000552801 PIK3C2BO00750 1634 aa13.41□□□□□ -0.26
TMEM116-217ENST00000552801 SLIT1O75093 1534 aa13.4□□□□□ -0.26
TMEM116-217ENST00000552801 LTKP29376 864 aa13.39□□□□□ -0.27
TMEM116-217ENST00000552801 EFCAB6Q5THR3 1501 aa13.39□□□□□ -0.27
TMEM116-217ENST00000552801 STRCP1A6NGW2 1772 aa13.39□□□□□ -0.27
TMEM116-217ENST00000552801 TMEM2Q9UHN6 1383 aa13.39□□□□□ -0.27
TMEM116-217ENST00000552801 ARHGAP23Q9P227 1491 aa13.38□□□□□ -0.27
TMEM116-217ENST00000552801 PPP1R15AO75807 674 aaPredicted RBP13.37□□□□□ -0.27
TMEM116-217ENST00000552801 HDGFP51858 240 aaKnown RBP13.37□□□□□ -0.27
TMEM116-217ENST00000552801 IDI1Q13907 227 aa13.36□□□□□ -0.27
TMEM116-217ENST00000552801 SLC52A1Q9NWF4 448 aa13.36□□□□□ -0.27
TMEM116-217ENST00000552801 KDM5AP29375 1690 aaKnown RBP13.36□□□□□ -0.27
TMEM116-217ENST00000552801 PROSER2Q86WR7 435 aaPredicted RBP13.35□□□□□ -0.27
TMEM116-217ENST00000552801 LMTK2Q8IWU2 1503 aa13.35□□□□□ -0.27
TMEM116-217ENST00000552801 CHGAP10645 457 aaKnown RBP13.34□□□□□ -0.27
TMEM116-217ENST00000552801 SLC26A8Q96RN1 970 aa13.34□□□□□ -0.27
TMEM116-217ENST00000552801 ANKRD50Q9ULJ7 1429 aa13.34□□□□□ -0.27
TMEM116-217ENST00000552801 ADGRB3O60242 1522 aa13.33□□□□□ -0.28
TMEM116-217ENST00000552801 KCNA6P17658 529 aa13.32□□□□□ -0.28
TMEM116-217ENST00000552801 ADGRL2O95490 1459 aa13.32□□□□□ -0.28
TMEM116-217ENST00000552801 RPRD2Q5VT52 1461 aaKnown RBP13.31□□□□□ -0.28
TMEM116-217ENST00000552801 TMEM94Q12767 1356 aa13.31□□□□□ -0.28
TMEM116-217ENST00000552801 ALKQ9UM73 1620 aa13.31□□□□□ -0.28
TMEM116-217ENST00000552801 C14orf37Q86TY3 774 aa13.31□□□□□ -0.28
TMEM116-217ENST00000552801 MSH6P52701 1360 aa13.3□□□□□ -0.28
TMEM116-217ENST00000552801 XIRP1Q702N8 1843 aaKnown RBP13.29□□□□□ -0.28
TMEM116-217ENST00000552801 NOS1P29475 1434 aa13.29□□□□□ -0.28
TMEM116-217ENST00000552801 TET3O43151 1660 aa13.29□□□□□ -0.28
TMEM116-217ENST00000552801 ITGAEP38570 1179 aa13.29□□□□□ -0.28
TMEM116-217ENST00000552801 GCC2Q8IWJ2 1684 aa13.28□□□□□ -0.28
TMEM116-217ENST00000552801 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.28□□□□□ -0.28
TMEM116-217ENST00000552801 NKTRP30414 1462 aaKnown RBP13.27□□□□□ -0.28
TMEM116-217ENST00000552801 RBM33Q96EV2 1170 aaKnown RBP13.27□□□□□ -0.29
TMEM116-217ENST00000552801 FAM135BQ49AJ0 1406 aa13.27□□□□□ -0.29
TMEM116-217ENST00000552801 MYO5BQ9ULV0 1848 aa13.26□□□□□ -0.29
TMEM116-217ENST00000552801 RIMS2Q9UQ26 1411 aa13.26□□□□□ -0.29
TMEM116-217ENST00000552801 ROBO1Q9Y6N7 1651 aa13.25□□□□□ -0.29
TMEM116-217ENST00000552801 PLEKHG1Q9ULL1 1385 aa13.24□□□□□ -0.29
TMEM116-217ENST00000552801 UNC13BO14795 1591 aa13.23□□□□□ -0.29
TMEM116-217ENST00000552801 ZBTB12Q9Y330 459 aaPredicted RBP13.23□□□□□ -0.29
TMEM116-217ENST00000552801 NWD1Q149M9 1564 aa13.23□□□□□ -0.29
TMEM116-217ENST00000552801 NUP155O75694 1391 aa13.22□□□□□ -0.29
TMEM116-217ENST00000552801 SLAIN2Q9P270 581 aa13.22□□□□□ -0.29
TMEM116-217ENST00000552801 ROCK1Q13464 1354 aa13.22□□□□□ -0.29
TMEM116-217ENST00000552801 ATF3P18847 181 aa13.21□□□□□ -0.29
TMEM116-217ENST00000552801 NUTM2DQ5VT03 806 aaPredicted RBP13.21□□□□□ -0.29
TMEM116-217ENST00000552801 TMEM131LA2VDJ0 1609 aa13.21□□□□□ -0.29
TMEM116-217ENST00000552801 CHD2O14647 1828 aaKnown RBP13.21□□□□□ -0.29
TMEM116-217ENST00000552801 PHLPP1O60346 1717 aa13.21□□□□□ -0.3
TMEM116-217ENST00000552801 E9PCH4 1651 aa13.21□□□□□ -0.3
TMEM116-217ENST00000552801 TBX22Q9Y458 520 aa13.2□□□□□ -0.3
TMEM116-217ENST00000552801 ZFYVE9O95405 1425 aa13.2□□□□□ -0.3
TMEM116-217ENST00000552801 IQGAP3Q86VI3 1631 aa13.2□□□□□ -0.3
TMEM116-217ENST00000552801 ZNF326Q5BKZ1 582 aaKnown RBP13.2□□□□□ -0.3
TMEM116-217ENST00000552801 MEX3CQ5U5Q3 659 aaKnown RBP13.2□□□□□ -0.3
TMEM116-217ENST00000552801 CADPS2Q86UW7 1296 aa13.19□□□□□ -0.3
TMEM116-217ENST00000552801 PPARGC1BQ86YN6 1023 aaKnown RBP13.19□□□□□ -0.3
TMEM116-217ENST00000552801 DIP2AQ14689 1571 aa13.18□□□□□ -0.3
TMEM116-217ENST00000552801 JCADQ9P266 1359 aa13.17□□□□□ -0.3
TMEM116-217ENST00000552801 TRPM2O94759 1503 aa13.16□□□□□ -0.3
TMEM116-217ENST00000552801 NCOA3Q9Y6Q9 1424 aa13.16□□□□□ -0.3
TMEM116-217ENST00000552801 C19orf44Q9H6X5 657 aa13.16□□□□□ -0.3
TMEM116-217ENST00000552801 PIK3R4Q99570 1358 aa13.16□□□□□ -0.3
TMEM116-217ENST00000552801 AMOTL2Q9Y2J4 779 aa13.14□□□□□ -0.31
TMEM116-217ENST00000552801 SPHKAPQ2M3C7 1700 aa13.13□□□□□ -0.31
TMEM116-217ENST00000552801 RGS17Q9UGC6 210 aaPredicted RBP13.13□□□□□ -0.31
TMEM116-217ENST00000552801 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.12□□□□□ -0.31
TMEM116-217ENST00000552801 ADAMTS13Q76LX8 1427 aa13.11□□□□□ -0.31
TMEM116-217ENST00000552801 SPATA31A6Q5VVP1 1343 aa13.11□□□□□ -0.31
TMEM116-217ENST00000552801 POTEAQ6S8J7 498 aa13.1□□□□□ -0.31
TMEM116-217ENST00000552801 TRIM52Q96A61 297 aa13.1□□□□□ -0.31
TMEM116-217ENST00000552801 ZNF772Q68DY9 489 aaPredicted RBP13.09□□□□□ -0.31
TMEM116-217ENST00000552801 KIF1BO60333 1816 aa13.09□□□□□ -0.31
TMEM116-217ENST00000552801 NUTM2BA6NNL0 878 aaPredicted RBP13.08□□□□□ -0.31
TMEM116-217ENST00000552801 NUTM2EB1AL46 878 aaPredicted RBP13.08□□□□□ -0.31
TMEM116-217ENST00000552801 NUTM2AQ8IVF1 878 aaPredicted RBP13.08□□□□□ -0.31
TMEM116-217ENST00000552801 COL16A1Q07092 1604 aaPredicted RBP13.08□□□□□ -0.32
TMEM116-217ENST00000552801 AHDC1Q5TGY3 1603 aaPredicted RBP13.06□□□□□ -0.32
TMEM116-217ENST00000552801 DCCP43146 1447 aa13.06□□□□□ -0.32
TMEM116-217ENST00000552801 SETBP1Q9Y6X0 1596 aa13.05□□□□□ -0.32
TMEM116-217ENST00000552801 SHPRHQ149N8 1683 aa13.05□□□□□ -0.32
TMEM116-217ENST00000552801 BRINP3Q76B58 766 aa13.05□□□□□ -0.32
TMEM116-217ENST00000552801 VGFO15240 615 aaPredicted RBP13.04□□□□□ -0.32
TMEM116-217ENST00000552801 MKRN4PQ13434 485 aaPredicted RBP13.04□□□□□ -0.32
TMEM116-217ENST00000552801 PTPRUQ92729 1446 aa13.03□□□□□ -0.32
TMEM116-217ENST00000552801 SETD1AO15047 1707 aaKnown RBP13.03□□□□□ -0.32
TMEM116-217ENST00000552801 XRN1Q8IZH2 1706 aaKnown RBP13.03□□□□□ -0.32
TMEM116-217ENST00000552801 LRRC59Q96AG4 307 aaKnown RBP13.03□□□□□ -0.32
TMEM116-217ENST00000552801 CLTCL1P53675 1640 aa13.02□□□□□ -0.32
TMEM116-217ENST00000552801 RXRBP28702 533 aa13.02□□□□□ -0.33
TMEM116-217ENST00000552801 ASXL1Q8IXJ9 1541 aa13.02□□□□□ -0.33
TMEM116-217ENST00000552801 NRXN3Q9Y4C0 1643 aa13.02□□□□□ -0.33
TMEM116-217ENST00000552801 METP08581 1390 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms