RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 COL16A1Q07092 1604 aaPredicted RBP13.46□□□□□ -0.25
CDK4-213ENST00000552713 LMTK2Q8IWU2 1503 aa13.46□□□□□ -0.25
CDK4-213ENST00000552713 NKTRP30414 1462 aaKnown RBP13.46□□□□□ -0.25
CDK4-213ENST00000552713 NOS1P29475 1434 aa13.45□□□□□ -0.26
CDK4-213ENST00000552713 DAPK1P53355 1430 aa13.45□□□□□ -0.26
CDK4-213ENST00000552713 GCC2Q8IWJ2 1684 aa13.44□□□□□ -0.26
CDK4-213ENST00000552713 LRP6O75581 1613 aa13.44□□□□□ -0.26
CDK4-213ENST00000552713 LOC105371045A0A1W2PR82 267 aa13.44□□□□□ -0.26
CDK4-213ENST00000552713 SLAIN2Q9P270 581 aa13.44□□□□□ -0.26
CDK4-213ENST00000552713 KANK1Q14678 1352 aa13.44□□□□□ -0.26
CDK4-213ENST00000552713 DCAF8L1A6NGE4 600 aa13.43□□□□□ -0.26
CDK4-213ENST00000552713 CHIC2Q9UKJ5 165 aa13.43□□□□□ -0.26
CDK4-213ENST00000552713 MSH6P52701 1360 aa13.43□□□□□ -0.26
CDK4-213ENST00000552713 JCADQ9P266 1359 aa13.43□□□□□ -0.26
CDK4-213ENST00000552713 RNF39Q9H2S5 420 aa13.42□□□□□ -0.26
CDK4-213ENST00000552713 ZFYVE9O95405 1425 aa13.41□□□□□ -0.26
CDK4-213ENST00000552713 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.41□□□□□ -0.26
CDK4-213ENST00000552713 TMEM131LA2VDJ0 1609 aa13.4□□□□□ -0.26
CDK4-213ENST00000552713 BCANQ96GW7 911 aa13.4□□□□□ -0.26
CDK4-213ENST00000552713 UPF1Q92900 1129 aaKnown RBP eCLIP13.39□□□□□ -0.27
CDK4-213ENST00000552713 SHPRHQ149N8 1683 aa13.39□□□□□ -0.27
CDK4-213ENST00000552713 PLEKHG1Q9ULL1 1385 aa13.38□□□□□ -0.27
CDK4-213ENST00000552713 FGD6Q6ZV73 1430 aa13.38□□□□□ -0.27
CDK4-213ENST00000552713 ANKRD30AQ9BXX3 1397 aa13.37□□□□□ -0.27
CDK4-213ENST00000552713 TRIM52Q96A61 297 aa13.37□□□□□ -0.27
CDK4-213ENST00000552713 SLC52A1Q9NWF4 448 aa13.37□□□□□ -0.27
CDK4-213ENST00000552713 RIMS2Q9UQ26 1411 aa13.37□□□□□ -0.27
CDK4-213ENST00000552713 AHDC1Q5TGY3 1603 aaPredicted RBP13.36□□□□□ -0.27
CDK4-213ENST00000552713 NUTM2DQ5VT03 806 aaPredicted RBP13.35□□□□□ -0.27
CDK4-213ENST00000552713 DIP2AQ14689 1571 aa13.35□□□□□ -0.27
CDK4-213ENST00000552713 ADAMTS13Q76LX8 1427 aa13.34□□□□□ -0.27
CDK4-213ENST00000552713 MEX3CQ5U5Q3 659 aaKnown RBP13.34□□□□□ -0.27
CDK4-213ENST00000552713 SPATA31A6Q5VVP1 1343 aa13.34□□□□□ -0.27
CDK4-213ENST00000552713 E9PCH4 1651 aa13.34□□□□□ -0.27
CDK4-213ENST00000552713 PPP1R15AO75807 674 aaPredicted RBP13.33□□□□□ -0.28
CDK4-213ENST00000552713 TBX22Q9Y458 520 aa13.33□□□□□ -0.28
CDK4-213ENST00000552713 ADGRL2O95490 1459 aa13.33□□□□□ -0.28
CDK4-213ENST00000552713 RPRD2Q5VT52 1461 aaKnown RBP13.33□□□□□ -0.28
CDK4-213ENST00000552713 ZNF772Q68DY9 489 aaPredicted RBP13.32□□□□□ -0.28
CDK4-213ENST00000552713 C14orf37Q86TY3 774 aa13.32□□□□□ -0.28
CDK4-213ENST00000552713 NCOA3Q9Y6Q9 1424 aa13.31□□□□□ -0.28
CDK4-213ENST00000552713 PTPRUQ92729 1446 aa13.3□□□□□ -0.28
CDK4-213ENST00000552713 NUTM2BA6NNL0 878 aaPredicted RBP13.3□□□□□ -0.28
CDK4-213ENST00000552713 NUTM2EB1AL46 878 aaPredicted RBP13.3□□□□□ -0.28
CDK4-213ENST00000552713 NUTM2AQ8IVF1 878 aaPredicted RBP13.3□□□□□ -0.28
CDK4-213ENST00000552713 C19orf44Q9H6X5 657 aa13.3□□□□□ -0.28
CDK4-213ENST00000552713 ANKRD50Q9ULJ7 1429 aa13.3□□□□□ -0.28
CDK4-213ENST00000552713 CHGAP10645 457 aaKnown RBP13.29□□□□□ -0.28
CDK4-213ENST00000552713 RXRBP28702 533 aa13.29□□□□□ -0.28
CDK4-213ENST00000552713 BRINP3Q76B58 766 aa13.29□□□□□ -0.28
CDK4-213ENST00000552713 CADPS2Q86UW7 1296 aa13.29□□□□□ -0.28
CDK4-213ENST00000552713 UNC13BO14795 1591 aa13.28□□□□□ -0.28
CDK4-213ENST00000552713 NHSL1Q5SYE7 1610 aa13.28□□□□□ -0.28
CDK4-213ENST00000552713 NRXN3Q9Y4C0 1643 aa13.28□□□□□ -0.28
CDK4-213ENST00000552713 ATF3P18847 181 aa13.28□□□□□ -0.28
CDK4-213ENST00000552713 HOXD11P31277 338 aaPredicted RBP13.27□□□□□ -0.29
CDK4-213ENST00000552713 HDGFP51858 240 aaKnown RBP13.27□□□□□ -0.29
CDK4-213ENST00000552713 XRN1Q8IZH2 1706 aaKnown RBP13.27□□□□□ -0.29
CDK4-213ENST00000552713 TRPM2O94759 1503 aa13.26□□□□□ -0.29
CDK4-213ENST00000552713 AFF2P51816 1311 aa13.26□□□□□ -0.29
CDK4-213ENST00000552713 ASXL1Q8IXJ9 1541 aa13.26□□□□□ -0.29
CDK4-213ENST00000552713 CDK12Q9NYV4 1490 aaPredicted RBP13.26□□□□□ -0.29
CDK4-213ENST00000552713 AMOTL2Q9Y2J4 779 aa13.26□□□□□ -0.29
CDK4-213ENST00000552713 PIK3R4Q99570 1358 aa13.25□□□□□ -0.29
CDK4-213ENST00000552713 APLP2Q06481 763 aa13.25□□□□□ -0.29
CDK4-213ENST00000552713 FAM50AQ14320 339 aaKnown RBP13.25□□□□□ -0.29
CDK4-213ENST00000552713 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.25□□□□□ -0.29
CDK4-213ENST00000552713 IQGAP3Q86VI3 1631 aa13.24□□□□□ -0.29
CDK4-213ENST00000552713 DDX17Q92841 729 aaKnown RBP13.24□□□□□ -0.29
CDK4-213ENST00000552713 RGS12O14924 1447 aa13.23□□□□□ -0.29
CDK4-213ENST00000552713 MST1RQ04912 1400 aa13.23□□□□□ -0.29
CDK4-213ENST00000552713 SETD5Q9C0A6 1442 aa13.23□□□□□ -0.29
CDK4-213ENST00000552713 NALCNQ8IZF0 1738 aa13.22□□□□□ -0.29
CDK4-213ENST00000552713 DCCP43146 1447 aa13.22□□□□□ -0.29
CDK4-213ENST00000552713 C8orf37Q96NL8 207 aa13.2□□□□□ -0.3
CDK4-213ENST00000552713 QTRT2Q9H974 415 aaKnown RBP13.2□□□□□ -0.3
CDK4-213ENST00000552713 SETBP1Q9Y6X0 1596 aa13.2□□□□□ -0.3
CDK4-213ENST00000552713 PNPLA6Q8IY17 1366 aa13.2□□□□□ -0.3
CDK4-213ENST00000552713 SPHKAPQ2M3C7 1700 aa13.19□□□□□ -0.3
CDK4-213ENST00000552713 METP08581 1390 aa13.19□□□□□ -0.3
CDK4-213ENST00000552713 RBM6P78332 1123 aaKnown RBP13.17□□□□□ -0.3
CDK4-213ENST00000552713 LRRC59Q96AG4 307 aaKnown RBP13.17□□□□□ -0.3
CDK4-213ENST00000552713 ADGRL3Q9HAR2 1447 aa13.15□□□□□ -0.3
CDK4-213ENST00000552713 LAMC1P11047 1609 aa13.15□□□□□ -0.3
CDK4-213ENST00000552713 ADAMTS2O95450 1211 aa13.15□□□□□ -0.3
CDK4-213ENST00000552713 NUP155O75694 1391 aa13.15□□□□□ -0.3
CDK4-213ENST00000552713 NEXMIFQ5QGS0 1516 aa13.13□□□□□ -0.31
CDK4-213ENST00000552713 NGLY1Q96IV0 654 aa13.13□□□□□ -0.31
CDK4-213ENST00000552713 CLTCL1P53675 1640 aa13.13□□□□□ -0.31
CDK4-213ENST00000552713 C1orf167Q5SNV9 1468 aa13.12□□□□□ -0.31
CDK4-213ENST00000552713 ROCK1Q13464 1354 aa13.12□□□□□ -0.31
CDK4-213ENST00000552713 KIF1BO60333 1816 aa13.12□□□□□ -0.31
CDK4-213ENST00000552713 C1QBPQ07021 282 aaKnown RBP13.12□□□□□ -0.31
CDK4-213ENST00000552713 PPP4R3CPQ6ZMV5 832 aa13.12□□□□□ -0.31
CDK4-213ENST00000552713 MARF1Q9Y4F3 1742 aaKnown RBP13.11□□□□□ -0.31
CDK4-213ENST00000552713 ZNF326Q5BKZ1 582 aaKnown RBP13.11□□□□□ -0.31
CDK4-213ENST00000552713 ORAI2Q96SN7 254 aa13.11□□□□□ -0.31
CDK4-213ENST00000552713 COL22A1Q8NFW1 1626 aaPredicted RBP13.1□□□□□ -0.31
CDK4-213ENST00000552713 ATAD2Q6PL18 1390 aa13.09□□□□□ -0.31
CDK4-213ENST00000552713 USP21Q9UK80 565 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms