RNA–Protein interactions for RNA: ENST00000552487.1

ATF1-204, Transcript of activating transcription factor 1, humanhuman

TSL 5

Gene ATF1, Length 745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-204ENST00000552487 RIMS2Q9UQ26 1411 aa16.7■□□□□ 0.26
ATF1-204ENST00000552487 UNC13BO14795 1591 aa16.69■□□□□ 0.26
ATF1-204ENST00000552487 ZNF326Q5BKZ1 582 aaKnown RBP16.68■□□□□ 0.26
ATF1-204ENST00000552487 MSH6P52701 1360 aa16.67■□□□□ 0.26
ATF1-204ENST00000552487 TMEM94Q12767 1356 aa16.67■□□□□ 0.26
ATF1-204ENST00000552487 PLEKHG1Q9ULL1 1385 aa16.67■□□□□ 0.26
ATF1-204ENST00000552487 GCC2Q8IWJ2 1684 aa16.67■□□□□ 0.26
ATF1-204ENST00000552487 TRIM52Q96A61 297 aa16.66■□□□□ 0.26
ATF1-204ENST00000552487 NKTRP30414 1462 aaKnown RBP16.65■□□□□ 0.26
ATF1-204ENST00000552487 SOCS7O14512 581 aa16.64■□□□□ 0.25
ATF1-204ENST00000552487 IQGAP3Q86VI3 1631 aa16.63■□□□□ 0.25
ATF1-204ENST00000552487 NUTM2DQ5VT03 806 aaPredicted RBP16.62■□□□□ 0.25
ATF1-204ENST00000552487 ILDR2Q71H61 639 aa16.62■□□□□ 0.25
ATF1-204ENST00000552487 TBX22Q9Y458 520 aa16.62■□□□□ 0.25
ATF1-204ENST00000552487 RRBP1Q9P2E9 1410 aaKnown RBP16.62■□□□□ 0.25
ATF1-204ENST00000552487 ZFYVE9O95405 1425 aa16.61■□□□□ 0.25
ATF1-204ENST00000552487 ATF3P18847 181 aa16.59■□□□□ 0.25
ATF1-204ENST00000552487 RBM33Q96EV2 1170 aaKnown RBP16.59■□□□□ 0.25
ATF1-204ENST00000552487 TMEM131LA2VDJ0 1609 aa16.58■□□□□ 0.24
ATF1-204ENST00000552487 E9PCH4 1651 aa16.58■□□□□ 0.24
ATF1-204ENST00000552487 STRCP1A6NGW2 1772 aa16.58■□□□□ 0.24
ATF1-204ENST00000552487 MED1Q15648 1581 aaPredicted RBP16.57■□□□□ 0.24
ATF1-204ENST00000552487 FAM135BQ49AJ0 1406 aa16.57■□□□□ 0.24
ATF1-204ENST00000552487 PIK3R4Q99570 1358 aa16.57■□□□□ 0.24
ATF1-204ENST00000552487 SLC4A1APQ9BWU0 796 aaKnown RBP16.57■□□□□ 0.24
ATF1-204ENST00000552487 CADPS2Q86UW7 1296 aa16.56■□□□□ 0.24
ATF1-204ENST00000552487 DIP2AQ14689 1571 aa16.55■□□□□ 0.24
ATF1-204ENST00000552487 SLAIN2Q9P270 581 aa16.55■□□□□ 0.24
ATF1-204ENST00000552487 NWD1Q149M9 1564 aa16.54■□□□□ 0.24
ATF1-204ENST00000552487 NAIPQ13075 1403 aa16.53■□□□□ 0.24
ATF1-204ENST00000552487 NCOA3Q9Y6Q9 1424 aa16.53■□□□□ 0.24
ATF1-204ENST00000552487 TRPM2O94759 1503 aa16.53■□□□□ 0.24
ATF1-204ENST00000552487 C19orf44Q9H6X5 657 aa16.52■□□□□ 0.24
ATF1-204ENST00000552487 AMOTL2Q9Y2J4 779 aa16.52■□□□□ 0.24
ATF1-204ENST00000552487 HFM1A2PYH4 1435 aa16.52■□□□□ 0.23
ATF1-204ENST00000552487 ACIN1Q9UKV3 1341 aaKnown RBP16.51■□□□□ 0.23
ATF1-204ENST00000552487 ALKQ9UM73 1620 aa16.5■□□□□ 0.23
ATF1-204ENST00000552487 VGFO15240 615 aaPredicted RBP16.5■□□□□ 0.23
ATF1-204ENST00000552487 SPHKAPQ2M3C7 1700 aa16.49■□□□□ 0.23
ATF1-204ENST00000552487 ADAMTS13Q76LX8 1427 aa16.49■□□□□ 0.23
ATF1-204ENST00000552487 MYO5BQ9ULV0 1848 aa16.48■□□□□ 0.23
ATF1-204ENST00000552487 MEX3CQ5U5Q3 659 aaKnown RBP16.47■□□□□ 0.23
ATF1-204ENST00000552487 RPGRIP1LQ68CZ1 1315 aa16.45■□□□□ 0.22
ATF1-204ENST00000552487 JCADQ9P266 1359 aa16.45■□□□□ 0.22
ATF1-204ENST00000552487 ROBO1Q9Y6N7 1651 aa16.45■□□□□ 0.22
ATF1-204ENST00000552487 CHD2O14647 1828 aaKnown RBP16.43■□□□□ 0.22
ATF1-204ENST00000552487 XIRP1Q702N8 1843 aaKnown RBP16.43■□□□□ 0.22
ATF1-204ENST00000552487 CCDC144AA2RUR9 1427 aa16.43■□□□□ 0.22
ATF1-204ENST00000552487 SETBP1Q9Y6X0 1596 aa16.42■□□□□ 0.22
ATF1-204ENST00000552487 DCCP43146 1447 aa16.41■□□□□ 0.22
ATF1-204ENST00000552487 CLTCL1P53675 1640 aa16.4■□□□□ 0.22
ATF1-204ENST00000552487 KIF1BO60333 1816 aa16.39■□□□□ 0.21
ATF1-204ENST00000552487 METP08581 1390 aa16.38■□□□□ 0.21
ATF1-204ENST00000552487 RGL3Q3MIN7 710 aa16.38■□□□□ 0.21
ATF1-204ENST00000552487 PHLPP1O60346 1717 aa16.38■□□□□ 0.21
ATF1-204ENST00000552487 SPATA31A6Q5VVP1 1343 aa16.38■□□□□ 0.21
ATF1-204ENST00000552487 PTPRUQ92729 1446 aa16.37■□□□□ 0.21
ATF1-204ENST00000552487 NEXMIFQ5QGS0 1516 aa16.37■□□□□ 0.21
ATF1-204ENST00000552487 MPHOSPH9Q99550 1183 aa16.37■□□□□ 0.21
ATF1-204ENST00000552487 FOXD1Q16676 465 aa16.36■□□□□ 0.21
ATF1-204ENST00000552487 BRINP3Q76B58 766 aa16.35■□□□□ 0.21
ATF1-204ENST00000552487 ADGRL3Q9HAR2 1447 aa16.35■□□□□ 0.21
ATF1-204ENST00000552487 ANKRD30BQ9BXX2 1392 aa16.34■□□□□ 0.21
ATF1-204ENST00000552487 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.33■□□□□ 0.21
ATF1-204ENST00000552487 NUTM2BA6NNL0 878 aaPredicted RBP16.33■□□□□ 0.2
ATF1-204ENST00000552487 NUTM2EB1AL46 878 aaPredicted RBP16.33■□□□□ 0.2
ATF1-204ENST00000552487 ZNF772Q68DY9 489 aaPredicted RBP16.33■□□□□ 0.2
ATF1-204ENST00000552487 NUTM2AQ8IVF1 878 aaPredicted RBP16.33■□□□□ 0.2
ATF1-204ENST00000552487 LRRC59Q96AG4 307 aaKnown RBP16.33■□□□□ 0.2
ATF1-204ENST00000552487 PTCH1Q13635 1447 aa16.32■□□□□ 0.2
ATF1-204ENST00000552487 SETD5Q9C0A6 1442 aa16.32■□□□□ 0.2
ATF1-204ENST00000552487 XRN1Q8IZH2 1706 aaKnown RBP16.31■□□□□ 0.2
ATF1-204ENST00000552487 NRXN3Q9Y4C0 1643 aa16.3■□□□□ 0.2
ATF1-204ENST00000552487 STK26Q9P289 416 aa16.3■□□□□ 0.2
ATF1-204ENST00000552487 AHDC1Q5TGY3 1603 aaPredicted RBP16.3■□□□□ 0.2
ATF1-204ENST00000552487 ASXL1Q8IXJ9 1541 aa16.29■□□□□ 0.2
ATF1-204ENST00000552487 MST1RQ04912 1400 aa16.28■□□□□ 0.2
ATF1-204ENST00000552487 COL16A1Q07092 1604 aaPredicted RBP16.27■□□□□ 0.2
ATF1-204ENST00000552487 RGS17Q9UGC6 210 aaPredicted RBP16.27■□□□□ 0.2
ATF1-204ENST00000552487 ROBO2Q9HCK4 1378 aa16.26■□□□□ 0.19
ATF1-204ENST00000552487 POTEAQ6S8J7 498 aa16.26■□□□□ 0.19
ATF1-204ENST00000552487 ADGRF5Q8IZF2 1346 aa16.25■□□□□ 0.19
ATF1-204ENST00000552487 ESCO1Q5FWF5 840 aa16.24■□□□□ 0.19
ATF1-204ENST00000552487 C1orf167Q5SNV9 1468 aa16.23■□□□□ 0.19
ATF1-204ENST00000552487 LRPPRCP42704 1394 aaKnown RBP16.23■□□□□ 0.19
ATF1-204ENST00000552487 RAB3GAP2Q9H2M9 1393 aa16.23■□□□□ 0.19
ATF1-204ENST00000552487 NPHP3Q7Z494 1330 aa16.22■□□□□ 0.19
ATF1-204ENST00000552487 C8orf37Q96NL8 207 aa16.22■□□□□ 0.19
ATF1-204ENST00000552487 SPATA31E1Q6ZUB1 1445 aa16.21■□□□□ 0.19
ATF1-204ENST00000552487 RXRBP28702 533 aa16.21■□□□□ 0.19
ATF1-204ENST00000552487 DHX57Q6P158 1386 aaKnown RBP16.21■□□□□ 0.19
ATF1-204ENST00000552487 PPLO60437 1756 aa16.21■□□□□ 0.18
ATF1-204ENST00000552487 PRAG1Q86YV5 1406 aa16.2■□□□□ 0.18
ATF1-204ENST00000552487 DDX17Q92841 729 aaKnown RBP16.2■□□□□ 0.18
ATF1-204ENST00000552487 NGLY1Q96IV0 654 aa16.2■□□□□ 0.18
ATF1-204ENST00000552487 POGKQ9P215 609 aa16.2■□□□□ 0.18
ATF1-204ENST00000552487 SHPRHQ149N8 1683 aa16.2■□□□□ 0.18
ATF1-204ENST00000552487 ADAMTS2O95450 1211 aa16.19■□□□□ 0.18
ATF1-204ENST00000552487 TMEM132EQ6IEE7 984 aa16.19■□□□□ 0.18
ATF1-204ENST00000552487 ORAI2Q96SN7 254 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 150.5 ms