RNA–Protein interactions for RNA: ENST00000552433.1

LETMD1-233, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 727 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-233ENST00000552433 PXYLP1Q8TE99 480 aa12.92□□□□□ -0.34
LETMD1-233ENST00000552433 OATP04181 439 aa12.91□□□□□ -0.34
LETMD1-233ENST00000552433 COPS2P61201 443 aa12.9□□□□□ -0.34
LETMD1-233ENST00000552433 IL21Q9HBE4 155 aa12.9□□□□□ -0.34
LETMD1-233ENST00000552433 METTL3Q86U44 580 aaKnown RBP12.89□□□□□ -0.35
LETMD1-233ENST00000552433 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.88□□□□□ -0.35
LETMD1-233ENST00000552433 NLRP7Q8WX94 980 aa12.88□□□□□ -0.35
LETMD1-233ENST00000552433 NECTIN2Q92692 538 aa12.88□□□□□ -0.35
LETMD1-233ENST00000552433 NKX2-3Q8TAU0 364 aa12.86□□□□□ -0.35
LETMD1-233ENST00000552433 SLC10A3P09131 477 aa12.85□□□□□ -0.35
LETMD1-233ENST00000552433 RGS20O76081 388 aa12.84□□□□□ -0.35
LETMD1-233ENST00000552433 TULP1O00294 542 aaPredicted RBP12.83□□□□□ -0.36
LETMD1-233ENST00000552433 PCDHB3Q9Y5E6 796 aa12.83□□□□□ -0.36
LETMD1-233ENST00000552433 PHOX2BQ99453 314 aa12.82□□□□□ -0.36
LETMD1-233ENST00000552433 CFHP08603 1231 aa12.81□□□□□ -0.36
LETMD1-233ENST00000552433 BLOC1S3Q6QNY0 202 aa12.8□□□□□ -0.36
LETMD1-233ENST00000552433 PRR14Q9BWN1 585 aa12.8□□□□□ -0.36
LETMD1-233ENST00000552433 PPP1R18Q6NYC8 613 aa12.79□□□□□ -0.36
LETMD1-233ENST00000552433 ZPR1O75312 459 aa12.78□□□□□ -0.36
LETMD1-233ENST00000552433 KMT5BQ4FZB7 885 aa12.78□□□□□ -0.36
LETMD1-233ENST00000552433 ACTN4O43707 911 aaKnown RBP12.77□□□□□ -0.37
LETMD1-233ENST00000552433 DAXXQ9UER7 740 aaPredicted RBP12.76□□□□□ -0.37
LETMD1-233ENST00000552433 DDX11L8A8MPP1 907 aa12.75□□□□□ -0.37
LETMD1-233ENST00000552433 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.75□□□□□ -0.37
LETMD1-233ENST00000552433 RDH13Q8NBN7 331 aa12.74□□□□□ -0.37
LETMD1-233ENST00000552433 RSPH4AQ5TD94 716 aa12.73□□□□□ -0.37
LETMD1-233ENST00000552433 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.73□□□□□ -0.37
LETMD1-233ENST00000552433 TLL1O43897 1013 aa12.72□□□□□ -0.37
LETMD1-233ENST00000552433 PUS10Q3MIT2 529 aaKnown RBP12.72□□□□□ -0.37
LETMD1-233ENST00000552433 MAP2K5Q13163 448 aa12.71□□□□□ -0.37
LETMD1-233ENST00000552433 IRX2Q9BZI1 471 aaPredicted RBP12.71□□□□□ -0.37
LETMD1-233ENST00000552433 IRF6O14896 467 aa12.7□□□□□ -0.38
LETMD1-233ENST00000552433 SLC24A1O60721 1099 aa12.69□□□□□ -0.38
LETMD1-233ENST00000552433 PRKD2Q9BZL6 878 aa12.68□□□□□ -0.38
LETMD1-233ENST00000552433 LMOD2Q6P5Q4 547 aa12.67□□□□□ -0.38
LETMD1-233ENST00000552433 SCUBE3Q8IX30 993 aa12.66□□□□□ -0.38
LETMD1-233ENST00000552433 MINK1Q8N4C8 1332 aaPredicted RBP12.65□□□□□ -0.38
LETMD1-233ENST00000552433 NR1I2O75469 434 aa12.65□□□□□ -0.38
LETMD1-233ENST00000552433 GGCXP38435 758 aa12.65□□□□□ -0.38
LETMD1-233ENST00000552433 FUT2Q10981 343 aa12.64□□□□□ -0.39
LETMD1-233ENST00000552433 SULF1Q8IWU6 871 aa12.64□□□□□ -0.39
LETMD1-233ENST00000552433 PPEF1O14829 653 aaPredicted RBP12.63□□□□□ -0.39
LETMD1-233ENST00000552433 GCGRP47871 477 aa12.63□□□□□ -0.39
LETMD1-233ENST00000552433 MDM2Q00987 491 aaPredicted RBP12.63□□□□□ -0.39
LETMD1-233ENST00000552433 CCDC102AQ96A19 550 aa12.63□□□□□ -0.39
LETMD1-233ENST00000552433 RNF223E7ERA6 249 aa12.61□□□□□ -0.39
LETMD1-233ENST00000552433 S1PR4O95977 384 aa12.61□□□□□ -0.39
LETMD1-233ENST00000552433 KRI1Q8N9T8 703 aaKnown RBP12.6□□□□□ -0.39
LETMD1-233ENST00000552433 TMUB1Q9BVT8 246 aa12.6□□□□□ -0.39
LETMD1-233ENST00000552433 MORN1Q5T089 497 aa12.59□□□□□ -0.39
LETMD1-233ENST00000552433 ADH1BP00325 375 aa12.58□□□□□ -0.4
LETMD1-233ENST00000552433 ATP6V1AP38606 617 aa12.58□□□□□ -0.4
LETMD1-233ENST00000552433 ZC3H15Q8WU90 426 aaKnown RBP12.56□□□□□ -0.4
LETMD1-233ENST00000552433 SPSB2Q99619 263 aa12.56□□□□□ -0.4
LETMD1-233ENST00000552433 SLC27A5Q9Y2P5 690 aa12.56□□□□□ -0.4
LETMD1-233ENST00000552433 V9GY48 417 aaPredicted RBP12.56□□□□□ -0.4
LETMD1-233ENST00000552433 SLC6A16Q9GZN6 736 aa12.55□□□□□ -0.4
LETMD1-233ENST00000552433 GFRA3O60609 400 aa12.54□□□□□ -0.4
LETMD1-233ENST00000552433 CD46P15529 392 aa12.54□□□□□ -0.4
LETMD1-233ENST00000552433 EMID1Q96A84 441 aaPredicted RBP12.54□□□□□ -0.4
LETMD1-233ENST00000552433 BARGINQ6ZT62 677 aa12.53□□□□□ -0.4
LETMD1-233ENST00000552433 ZMYND10O75800 440 aa12.52□□□□□ -0.41
LETMD1-233ENST00000552433 SLC19A1P41440 591 aa12.51□□□□□ -0.41
LETMD1-233ENST00000552433 Q6ZNB5 142 aa12.51□□□□□ -0.41
LETMD1-233ENST00000552433 ANKLE1Q8NAG6 615 aa12.51□□□□□ -0.41
LETMD1-233ENST00000552433 THAP11Q96EK4 314 aa12.51□□□□□ -0.41
LETMD1-233ENST00000552433 REPIN1Q9BWE0 567 aaKnown RBP12.5□□□□□ -0.41
LETMD1-233ENST00000552433 GPCPD1Q9NPB8 672 aa12.5□□□□□ -0.41
LETMD1-233ENST00000552433 CLCN1P35523 988 aa12.49□□□□□ -0.41
LETMD1-233ENST00000552433 KDM4AO75164 1064 aa12.48□□□□□ -0.41
LETMD1-233ENST00000552433 FMNL1O95466 1100 aaPredicted RBP12.48□□□□□ -0.41
LETMD1-233ENST00000552433 GRIPAP1Q4V328 841 aa12.48□□□□□ -0.41
LETMD1-233ENST00000552433 LIAT1Q6ZQX7 453 aa12.48□□□□□ -0.41
LETMD1-233ENST00000552433 FAM160A2Q8N612 972 aaPredicted RBP12.48□□□□□ -0.41
LETMD1-233ENST00000552433 HLA-CQ95604 372 aa12.48□□□□□ -0.41
LETMD1-233ENST00000552433 PLA2G2CQ5R387 149 aa12.47□□□□□ -0.41
LETMD1-233ENST00000552433 BRICD5Q6PL45 260 aa12.47□□□□□ -0.41
LETMD1-233ENST00000552433 RNF19BQ6ZMZ0 732 aa12.47□□□□□ -0.41
LETMD1-233ENST00000552433 FAM217BQ9NTX9 383 aaPredicted RBP12.47□□□□□ -0.41
LETMD1-233ENST00000552433 PRDM9Q9NQV7 894 aa12.45□□□□□ -0.42
LETMD1-233ENST00000552433 PDZRN3Q9UPQ7 1066 aa12.45□□□□□ -0.42
LETMD1-233ENST00000552433 SPRYD7Q5W111 196 aa12.44□□□□□ -0.42
LETMD1-233ENST00000552433 LAPTM4AQ15012 233 aa12.43□□□□□ -0.42
LETMD1-233ENST00000552433 SSTR3P32745 418 aaPredicted RBP12.42□□□□□ -0.42
LETMD1-233ENST00000552433 GUCA2AQ02747 115 aa12.42□□□□□ -0.42
LETMD1-233ENST00000552433 SALL2Q9Y467 1007 aaPredicted RBP12.42□□□□□ -0.42
LETMD1-233ENST00000552433 TTLL12Q14166 644 aaPredicted RBP12.41□□□□□ -0.42
LETMD1-233ENST00000552433 NRG2O14511 850 aaPredicted RBP12.4□□□□□ -0.42
LETMD1-233ENST00000552433 ZNF598Q86UK7 904 aaKnown RBP12.4□□□□□ -0.42
LETMD1-233ENST00000552433 FCF1Q9Y324 198 aaKnown RBP12.4□□□□□ -0.42
LETMD1-233ENST00000552433 HOXA2O43364 376 aa12.39□□□□□ -0.43
LETMD1-233ENST00000552433 Q3C1V9 767 aa12.39□□□□□ -0.43
LETMD1-233ENST00000552433 TRIM67Q6ZTA4 783 aa12.39□□□□□ -0.43
LETMD1-233ENST00000552433 NUTM1Q86Y26 1132 aa12.39□□□□□ -0.43
LETMD1-233ENST00000552433 USP46P62068 366 aa12.38□□□□□ -0.43
LETMD1-233ENST00000552433 ZNF697Q5TEC3 545 aa12.38□□□□□ -0.43
LETMD1-233ENST00000552433 LCE2BO14633 110 aa12.37□□□□□ -0.43
LETMD1-233ENST00000552433 AMHR2Q16671 573 aa12.36□□□□□ -0.43
LETMD1-233ENST00000552433 SYMPKQ92797 1274 aaKnown RBP12.36□□□□□ -0.43
LETMD1-233ENST00000552433 TRIM66O15016 1216 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms