RNA–Protein interactions for RNA: ENST00000552352.1

RPH3A-223, Transcript of rabphilin 3A, human

TSL 3

Gene RPH3A, Length 2,535 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPH3A-223	ENST00000552352	NPM1	P06748	294 aa	Known RBP eCLIP	10.65	□□□□□ -0.7
RPH3A-223	ENST00000552352	IL27	Q8NEV9	243 aa		10.65	□□□□□ -0.7
RPH3A-223	ENST00000552352	BRD4	O60885	1362 aa	Predicted RBP	10.65	□□□□□ -0.7
RPH3A-223	ENST00000552352	CEP152	O94986	1710 aa		10.65	□□□□□ -0.7
RPH3A-223	ENST00000552352	GLI2	P10070	1586 aa		10.65	□□□□□ -0.7
RPH3A-223	ENST00000552352	NEFM	P07197	916 aa		10.64	□□□□□ -0.71
RPH3A-223	ENST00000552352	PDE4A	P27815	886 aa		10.64	□□□□□ -0.71
RPH3A-223	ENST00000552352	KANK1	Q14678	1352 aa		10.64	□□□□□ -0.71
RPH3A-223	ENST00000552352	CD109	Q6YHK3	1445 aa		10.64	□□□□□ -0.71
RPH3A-223	ENST00000552352	PPM1G	O15355	546 aa	Predicted RBP	10.64	□□□□□ -0.71
RPH3A-223	ENST00000552352	NPM2	Q86SE8	214 aa	Known RBP	10.64	□□□□□ -0.71
RPH3A-223	ENST00000552352	BACH2	Q9BYV9	841 aa		10.64	□□□□□ -0.71
RPH3A-223	ENST00000552352	WASHC2C	Q9Y4E1	1318 aa		10.64	□□□□□ -0.71
RPH3A-223	ENST00000552352	CNGB1	Q14028	1251 aa	Predicted RBP	10.63	□□□□□ -0.71
RPH3A-223	ENST00000552352	AFAP1	Q8N556	730 aa		10.63	□□□□□ -0.71
RPH3A-223	ENST00000552352	SALL2	Q9Y467	1007 aa	Predicted RBP	10.63	□□□□□ -0.71
RPH3A-223	ENST00000552352	HECW2	Q9P2P5	1572 aa		10.63	□□□□□ -0.71
RPH3A-223	ENST00000552352	EXOC6	Q8TAG9	804 aa		10.63	□□□□□ -0.71
RPH3A-223	ENST00000552352	POLR3GL	Q9BT43	218 aa		10.63	□□□□□ -0.71
RPH3A-223	ENST00000552352	MYBBP1A	Q9BQG0	1328 aa	Known RBP	10.63	□□□□□ -0.71
RPH3A-223	ENST00000552352	EFCAB6	Q5THR3	1501 aa		10.63	□□□□□ -0.71
RPH3A-223	ENST00000552352	ZBTB22	O15209	634 aa		10.62	□□□□□ -0.71
RPH3A-223	ENST00000552352	RCAN3	Q9UKA8	241 aa		10.62	□□□□□ -0.71
RPH3A-223	ENST00000552352	MAP3K4	Q9Y6R4	1608 aa		10.62	□□□□□ -0.71
RPH3A-223	ENST00000552352	LAS1L	Q9Y4W2	734 aa	Known RBP	10.61	□□□□□ -0.71
RPH3A-223	ENST00000552352	CLTCL1	P53675	1640 aa		10.61	□□□□□ -0.71
RPH3A-223	ENST00000552352	MADD	Q8WXG6	1647 aa		10.61	□□□□□ -0.71
RPH3A-223	ENST00000552352	RALBP1	Q15311	655 aa		10.61	□□□□□ -0.71
RPH3A-223	ENST00000552352	KIAA1210	Q9ULL0	1709 aa		10.61	□□□□□ -0.71
RPH3A-223	ENST00000552352	PDE3B	Q13370	1112 aa		10.6	□□□□□ -0.71
RPH3A-223	ENST00000552352	DCAF11	Q8TEB1	546 aa		10.6	□□□□□ -0.71
RPH3A-223	ENST00000552352	CARD11	Q9BXL7	1154 aa		10.6	□□□□□ -0.71
RPH3A-223	ENST00000552352	FRMPD1	Q5SYB0	1578 aa		10.6	□□□□□ -0.71
RPH3A-223	ENST00000552352	SENP3-EIF4A1	A0A087X0R7	540 aa		10.6	□□□□□ -0.71
RPH3A-223	ENST00000552352	DDRGK1	Q96HY6	314 aa		10.59	□□□□□ -0.71
RPH3A-223	ENST00000552352	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	10.59	□□□□□ -0.71
RPH3A-223	ENST00000552352	MYOM2	P54296	1465 aa		10.58	□□□□□ -0.72
RPH3A-223	ENST00000552352	ZNF326	Q5BKZ1	582 aa	Known RBP	10.58	□□□□□ -0.72
RPH3A-223	ENST00000552352	COL17A1	Q9UMD9	1497 aa	Predicted RBP	10.58	□□□□□ -0.72
RPH3A-223	ENST00000552352	PPRC1	Q5VV67	1664 aa	Known RBP	10.57	□□□□□ -0.72
RPH3A-223	ENST00000552352	IQGAP1	P46940	1657 aa		10.57	□□□□□ -0.72
RPH3A-223	ENST00000552352	ABCA6	Q8N139	1617 aa		10.57	□□□□□ -0.72
RPH3A-223	ENST00000552352	RICTOR	Q6R327	1708 aa		10.56	□□□□□ -0.72
RPH3A-223	ENST00000552352	IFT172	Q9UG01	1749 aa		10.55	□□□□□ -0.72
RPH3A-223	ENST00000552352	ZMYM4	Q5VZL5	1548 aa		10.55	□□□□□ -0.72
RPH3A-223	ENST00000552352	ZC3H13	Q5T200	1668 aa	Known RBP	10.55	□□□□□ -0.72
RPH3A-223	ENST00000552352	NRXN1	Q9ULB1	1477 aa		10.55	□□□□□ -0.72
RPH3A-223	ENST00000552352	INSR	P06213	1382 aa		10.55	□□□□□ -0.72
RPH3A-223	ENST00000552352	PARD3	Q8TEW0	1356 aa		10.55	□□□□□ -0.72
RPH3A-223	ENST00000552352	HOXD11	P31277	338 aa	Predicted RBP	10.55	□□□□□ -0.72
RPH3A-223	ENST00000552352	NLRP13	Q86W25	1043 aa		10.55	□□□□□ -0.72
RPH3A-223	ENST00000552352	DIP2C	Q9Y2E4	1556 aa		10.55	□□□□□ -0.72
RPH3A-223	ENST00000552352	ADGRB3	O60242	1522 aa		10.54	□□□□□ -0.72
RPH3A-223	ENST00000552352	RIMBP3C	A6NJZ7	1639 aa		10.54	□□□□□ -0.72
RPH3A-223	ENST00000552352	RIMBP3B	A6NNM3	1639 aa		10.54	□□□□□ -0.72
RPH3A-223	ENST00000552352	RIMBP3	Q9UFD9	1639 aa		10.54	□□□□□ -0.72
RPH3A-223	ENST00000552352	KIF3B	O15066	747 aa		10.54	□□□□□ -0.72
RPH3A-223	ENST00000552352	GSE1	Q14687	1217 aa		10.54	□□□□□ -0.72
RPH3A-223	ENST00000552352	KDM2A	Q9Y2K7	1162 aa		10.54	□□□□□ -0.72
RPH3A-223	ENST00000552352	ST20-MTHFS	A0A0A6YYL1	179 aa		10.53	□□□□□ -0.72
RPH3A-223	ENST00000552352	KIF1B	O60333	1816 aa		10.53	□□□□□ -0.72
RPH3A-223	ENST00000552352	ABCC3	O15438	1527 aa		10.53	□□□□□ -0.72
RPH3A-223	ENST00000552352	ARHGAP31	Q2M1Z3	1444 aa		10.53	□□□□□ -0.72
RPH3A-223	ENST00000552352	BLM	P54132	1417 aa	Predicted RBP	10.52	□□□□□ -0.72
RPH3A-223	ENST00000552352	RERE	Q9P2R6	1566 aa		10.52	□□□□□ -0.73
RPH3A-223	ENST00000552352	SCAF11	Q99590	1463 aa	Known RBP	10.52	□□□□□ -0.73
RPH3A-223	ENST00000552352	DIP2B	Q9P265	1576 aa		10.51	□□□□□ -0.73
RPH3A-223	ENST00000552352	NFKBIB	Q15653	356 aa		10.51	□□□□□ -0.73
RPH3A-223	ENST00000552352	TESK2	Q96S53	571 aa		10.51	□□□□□ -0.73
RPH3A-223	ENST00000552352	CAMSAP1	Q5T5Y3	1602 aa		10.51	□□□□□ -0.73
RPH3A-223	ENST00000552352	SETBP1	Q9Y6X0	1596 aa		10.51	□□□□□ -0.73
RPH3A-223	ENST00000552352	PIK3C2B	O00750	1634 aa		10.5	□□□□□ -0.73
RPH3A-223	ENST00000552352	NOS1	P29475	1434 aa		10.5	□□□□□ -0.73
RPH3A-223	ENST00000552352	RGL3	Q3MIN7	710 aa		10.5	□□□□□ -0.73
RPH3A-223	ENST00000552352	CDCA7L	Q96GN5	454 aa		10.5	□□□□□ -0.73
RPH3A-223	ENST00000552352	CRBN	Q96SW2	442 aa		10.5	□□□□□ -0.73
RPH3A-223	ENST00000552352	BRPF3	Q9ULD4	1205 aa		10.5	□□□□□ -0.73
RPH3A-223	ENST00000552352	NPAT	Q14207	1427 aa		10.5	□□□□□ -0.73
RPH3A-223	ENST00000552352	MYO3A	Q8NEV4	1616 aa		10.5	□□□□□ -0.73
RPH3A-223	ENST00000552352	NBPF1	Q3BBV0	1214 aa		10.49	□□□□□ -0.73
RPH3A-223	ENST00000552352	MROH2A	A6NES4	1674 aa		10.49	□□□□□ -0.73
RPH3A-223	ENST00000552352	KDM2B	Q8NHM5	1336 aa		10.49	□□□□□ -0.73
RPH3A-223	ENST00000552352	PLIN1	O60240	522 aa		10.48	□□□□□ -0.73
RPH3A-223	ENST00000552352	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	10.48	□□□□□ -0.73
RPH3A-223	ENST00000552352	EIF3A	Q14152	1382 aa	Known RBP	10.48	□□□□□ -0.73
RPH3A-223	ENST00000552352	SYNM	O15061	1565 aa		10.47	□□□□□ -0.73
RPH3A-223	ENST00000552352	RPGRIP1L	Q68CZ1	1315 aa		10.47	□□□□□ -0.73
RPH3A-223	ENST00000552352	AGL	P35573	1532 aa		10.47	□□□□□ -0.73
RPH3A-223	ENST00000552352	PPL	O60437	1756 aa		10.47	□□□□□ -0.73
RPH3A-223	ENST00000552352	PER1	O15534	1290 aa	Predicted RBP	10.47	□□□□□ -0.73
RPH3A-223	ENST00000552352	CENPQ	Q7L2Z9	268 aa	Predicted RBP	10.47	□□□□□ -0.73
RPH3A-223	ENST00000552352	FRAT1	Q92837	279 aa	Predicted RBP	10.47	□□□□□ -0.73
RPH3A-223	ENST00000552352	SBNO2	Q9Y2G9	1366 aa		10.46	□□□□□ -0.73
RPH3A-223	ENST00000552352	TMF1	P82094	1093 aa		10.46	□□□□□ -0.73
RPH3A-223	ENST00000552352	SKAP1	Q86WV1	359 aa		10.46	□□□□□ -0.73
RPH3A-223	ENST00000552352	UGGT1	Q9NYU2	1555 aa		10.46	□□□□□ -0.73
RPH3A-223	ENST00000552352	DISP3	Q9P2K9	1392 aa		10.46	□□□□□ -0.73
RPH3A-223	ENST00000552352	FAM161A	Q3B820	660 aa		10.45	□□□□□ -0.74
RPH3A-223	ENST00000552352	CDCA8	Q53HL2	280 aa		10.45	□□□□□ -0.74
RPH3A-223	ENST00000552352	FOXD4L1	Q9NU39	408 aa		10.45	□□□□□ -0.74

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