RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 KANK4Q5T7N3 995 aaPredicted RBP24.1■■□□□ 1.45
CACNB3-220ENST00000551716 LMTK2Q8IWU2 1503 aa24.1■■□□□ 1.45
CACNB3-220ENST00000551716 C14orf37Q86TY3 774 aa24.09■■□□□ 1.45
CACNB3-220ENST00000551716 SETD1AO15047 1707 aaKnown RBP24.09■■□□□ 1.45
CACNB3-220ENST00000551716 ABCC5O15440 1437 aa24.09■■□□□ 1.45
CACNB3-220ENST00000551716 CADPS2Q86UW7 1296 aa24.08■■□□□ 1.45
CACNB3-220ENST00000551716 TBX22Q9Y458 520 aa24.08■■□□□ 1.45
CACNB3-220ENST00000551716 NOS1P29475 1434 aa24.08■■□□□ 1.44
CACNB3-220ENST00000551716 PPP1R15AO75807 674 aaPredicted RBP24.07■■□□□ 1.44
CACNB3-220ENST00000551716 PLEKHG1Q9ULL1 1385 aa24.06■■□□□ 1.44
CACNB3-220ENST00000551716 ATF3P18847 181 aa24.06■■□□□ 1.44
CACNB3-220ENST00000551716 C19orf44Q9H6X5 657 aa24.06■■□□□ 1.44
CACNB3-220ENST00000551716 VPS8Q8N3P4 1428 aa24.06■■□□□ 1.44
CACNB3-220ENST00000551716 ANKRD30AQ9BXX3 1397 aa24.04■■□□□ 1.44
CACNB3-220ENST00000551716 ADGRB3O60242 1522 aa24.04■■□□□ 1.44
CACNB3-220ENST00000551716 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.03■■□□□ 1.44
CACNB3-220ENST00000551716 COL16A1Q07092 1604 aaPredicted RBP24.02■■□□□ 1.44
CACNB3-220ENST00000551716 LRP6O75581 1613 aa24.02■■□□□ 1.44
CACNB3-220ENST00000551716 CDK12Q9NYV4 1490 aaPredicted RBP24■■□□□ 1.43
CACNB3-220ENST00000551716 DAPK1P53355 1430 aa23.99■■□□□ 1.43
CACNB3-220ENST00000551716 ZFYVE9O95405 1425 aa23.98■■□□□ 1.43
CACNB3-220ENST00000551716 RPRD2Q5VT52 1461 aaKnown RBP23.97■■□□□ 1.43
CACNB3-220ENST00000551716 CHIC2Q9UKJ5 165 aa23.97■■□□□ 1.43
CACNB3-220ENST00000551716 RIMS2Q9UQ26 1411 aa23.97■■□□□ 1.43
CACNB3-220ENST00000551716 PIK3R4Q99570 1358 aa23.96■■□□□ 1.43
CACNB3-220ENST00000551716 NUTM2BA6NNL0 878 aaPredicted RBP23.95■■□□□ 1.42
CACNB3-220ENST00000551716 NUTM2EB1AL46 878 aaPredicted RBP23.95■■□□□ 1.42
CACNB3-220ENST00000551716 NUTM2AQ8IVF1 878 aaPredicted RBP23.95■■□□□ 1.42
CACNB3-220ENST00000551716 CHD2O14647 1828 aaKnown RBP23.95■■□□□ 1.42
CACNB3-220ENST00000551716 AHDC1Q5TGY3 1603 aaPredicted RBP23.95■■□□□ 1.42
CACNB3-220ENST00000551716 APLP2Q06481 763 aa23.93■■□□□ 1.42
CACNB3-220ENST00000551716 BRINP3Q76B58 766 aa23.92■■□□□ 1.42
CACNB3-220ENST00000551716 CROCC2H7BZ55 1655 aa23.92■■□□□ 1.42
CACNB3-220ENST00000551716 AFF2P51816 1311 aa23.91■■□□□ 1.42
CACNB3-220ENST00000551716 SHPRHQ149N8 1683 aa23.91■■□□□ 1.42
CACNB3-220ENST00000551716 PTPN23Q9H3S7 1636 aa23.91■■□□□ 1.42
CACNB3-220ENST00000551716 FOXD1Q16676 465 aa23.9■■□□□ 1.42
CACNB3-220ENST00000551716 RBM6P78332 1123 aaKnown RBP23.89■■□□□ 1.41
CACNB3-220ENST00000551716 LRRC59Q96AG4 307 aaKnown RBP23.89■■□□□ 1.41
CACNB3-220ENST00000551716 CHGAP10645 457 aaKnown RBP23.88■■□□□ 1.41
CACNB3-220ENST00000551716 QTRT2Q9H974 415 aaKnown RBP23.87■■□□□ 1.41
CACNB3-220ENST00000551716 AMOTL2Q9Y2J4 779 aa23.87■■□□□ 1.41
CACNB3-220ENST00000551716 ADAMTS13Q76LX8 1427 aa23.85■■□□□ 1.41
CACNB3-220ENST00000551716 SETD5Q9C0A6 1442 aa23.84■■□□□ 1.41
CACNB3-220ENST00000551716 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.84■■□□□ 1.41
CACNB3-220ENST00000551716 NGLY1Q96IV0 654 aa23.84■■□□□ 1.41
CACNB3-220ENST00000551716 DCCP43146 1447 aa23.84■■□□□ 1.41
CACNB3-220ENST00000551716 DIP2AQ14689 1571 aa23.83■■□□□ 1.41
CACNB3-220ENST00000551716 TMEM131LA2VDJ0 1609 aa23.82■■□□□ 1.4
CACNB3-220ENST00000551716 NUTM2DQ5VT03 806 aaPredicted RBP23.82■■□□□ 1.4
CACNB3-220ENST00000551716 C8orf37Q96NL8 207 aa23.82■■□□□ 1.4
CACNB3-220ENST00000551716 ANKRD50Q9ULJ7 1429 aa23.82■■□□□ 1.4
CACNB3-220ENST00000551716 ADGRL2O95490 1459 aa23.8■■□□□ 1.4
CACNB3-220ENST00000551716 SRCAPQ6ZRS2 3230 aa23.78■■□□□ 1.4
CACNB3-220ENST00000551716 RGS12O14924 1447 aa23.76■■□□□ 1.39
CACNB3-220ENST00000551716 TRPM2O94759 1503 aa23.76■■□□□ 1.39
CACNB3-220ENST00000551716 ASXL1Q8IXJ9 1541 aa23.75■■□□□ 1.39
CACNB3-220ENST00000551716 LOC105371045A0A1W2PR82 267 aa23.75■■□□□ 1.39
CACNB3-220ENST00000551716 ZRANB1Q9UGI0 708 aa23.75■■□□□ 1.39
CACNB3-220ENST00000551716 GCC2Q8IWJ2 1684 aa23.75■■□□□ 1.39
CACNB3-220ENST00000551716 ATAD2Q6PL18 1390 aa23.75■■□□□ 1.39
CACNB3-220ENST00000551716 MYO5BQ9ULV0 1848 aa23.73■■□□□ 1.39
CACNB3-220ENST00000551716 MST1RQ04912 1400 aa23.72■■□□□ 1.39
CACNB3-220ENST00000551716 PTPRUQ92729 1446 aa23.72■■□□□ 1.39
CACNB3-220ENST00000551716 PNPLA6Q8IY17 1366 aa23.71■■□□□ 1.39
CACNB3-220ENST00000551716 FAM50AQ14320 339 aaKnown RBP23.71■■□□□ 1.39
CACNB3-220ENST00000551716 CCDC125Q86Z20 511 aa23.69■■□□□ 1.38
CACNB3-220ENST00000551716 ADAMTS2O95450 1211 aa23.68■■□□□ 1.38
CACNB3-220ENST00000551716 TRPC5Q9UL62 973 aaPredicted RBP23.68■■□□□ 1.38
CACNB3-220ENST00000551716 USP21Q9UK80 565 aa23.67■■□□□ 1.38
CACNB3-220ENST00000551716 NHSL1Q5SYE7 1610 aa23.64■■□□□ 1.38
CACNB3-220ENST00000551716 DDX17Q92841 729 aaKnown RBP23.64■■□□□ 1.37
CACNB3-220ENST00000551716 FNBP4Q8N3X1 1017 aaPredicted RBP23.63■■□□□ 1.37
CACNB3-220ENST00000551716 ADGRL3Q9HAR2 1447 aa23.62■■□□□ 1.37
CACNB3-220ENST00000551716 UNC13BO14795 1591 aa23.61■■□□□ 1.37
CACNB3-220ENST00000551716 ZNF326Q5BKZ1 582 aaKnown RBP23.6■■□□□ 1.37
CACNB3-220ENST00000551716 METP08581 1390 aa23.59■■□□□ 1.37
CACNB3-220ENST00000551716 SOS2Q07890 1332 aaPredicted RBP23.59■■□□□ 1.37
CACNB3-220ENST00000551716 SETBP1Q9Y6X0 1596 aa23.58■■□□□ 1.37
CACNB3-220ENST00000551716 NUP155O75694 1391 aa23.58■■□□□ 1.37
CACNB3-220ENST00000551716 XRN1Q8IZH2 1706 aaKnown RBP23.58■■□□□ 1.37
CACNB3-220ENST00000551716 PTCH1Q13635 1447 aa23.58■■□□□ 1.36
CACNB3-220ENST00000551716 E9PCH4 1651 aa23.57■■□□□ 1.36
CACNB3-220ENST00000551716 C1orf167Q5SNV9 1468 aa23.55■■□□□ 1.36
CACNB3-220ENST00000551716 ROCK1Q13464 1354 aa23.54■■□□□ 1.36
CACNB3-220ENST00000551716 ATRNO75882 1429 aa23.52■■□□□ 1.36
CACNB3-220ENST00000551716 ORAI2Q96SN7 254 aa23.51■■□□□ 1.35
CACNB3-220ENST00000551716 IQGAP3Q86VI3 1631 aa23.51■■□□□ 1.35
CACNB3-220ENST00000551716 NRXN3Q9Y4C0 1643 aa23.5■■□□□ 1.35
CACNB3-220ENST00000551716 GJD4Q96KN9 370 aaPredicted RBP23.47■■□□□ 1.35
CACNB3-220ENST00000551716 LAMC1P11047 1609 aa23.47■■□□□ 1.35
CACNB3-220ENST00000551716 NPHP3Q7Z494 1330 aa23.44■■□□□ 1.34
CACNB3-220ENST00000551716 VGFO15240 615 aaPredicted RBP23.44■■□□□ 1.34
CACNB3-220ENST00000551716 BCL9LQ86UU0 1499 aa23.42■■□□□ 1.34
CACNB3-220ENST00000551716 NALCNQ8IZF0 1738 aa23.41■■□□□ 1.34
CACNB3-220ENST00000551716 SF3B2Q13435 895 aaKnown RBP23.4■■□□□ 1.34
CACNB3-220ENST00000551716 BLMP54132 1417 aaPredicted RBP23.4■■□□□ 1.34
CACNB3-220ENST00000551716 ROBO2Q9HCK4 1378 aa23.4■■□□□ 1.34
CACNB3-220ENST00000551716 EP400Q96L91 3159 aa23.39■■□□□ 1.34
CACNB3-220ENST00000551716 ESCO1Q5FWF5 840 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms