RNA–Protein interactions for RNA: ENST00000551261.5

LETMD1-229, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-229ENST00000551261 USP47Q96K76 1375 aa20.04■□□□□ 0.8
LETMD1-229ENST00000551261 SETBP1Q9Y6X0 1596 aa20.04■□□□□ 0.8
LETMD1-229ENST00000551261 PIK3C2GO75747 1445 aa20.02■□□□□ 0.8
LETMD1-229ENST00000551261 CARD11Q9BXL7 1154 aa20.02■□□□□ 0.8
LETMD1-229ENST00000551261 POLR1AO95602 1720 aaPredicted RBP20.02■□□□□ 0.79
LETMD1-229ENST00000551261 VGFO15240 615 aaPredicted RBP20.01■□□□□ 0.79
LETMD1-229ENST00000551261 A2ML1A8K2U0 1454 aa20■□□□□ 0.79
LETMD1-229ENST00000551261 CHGAP10645 457 aaKnown RBP20■□□□□ 0.79
LETMD1-229ENST00000551261 FBXO31Q5XUX0 539 aaPredicted RBP20■□□□□ 0.79
LETMD1-229ENST00000551261 HSPA5P11021 654 aaKnown RBP19.99■□□□□ 0.79
LETMD1-229ENST00000551261 EIF3AQ14152 1382 aaKnown RBP19.98■□□□□ 0.79
LETMD1-229ENST00000551261 IQGAP1P46940 1657 aa19.98■□□□□ 0.79
LETMD1-229ENST00000551261 SCAF11Q99590 1463 aaKnown RBP19.97■□□□□ 0.79
LETMD1-229ENST00000551261 MYO5BQ9ULV0 1848 aa19.97■□□□□ 0.79
LETMD1-229ENST00000551261 RIMS1Q86UR5 1692 aaKnown RBP19.97■□□□□ 0.79
LETMD1-229ENST00000551261 DIEXFQ68CQ4 756 aaKnown RBP19.96■□□□□ 0.79
LETMD1-229ENST00000551261 STAG3Q9UJ98 1225 aa19.96■□□□□ 0.79
LETMD1-229ENST00000551261 UBR1Q8IWV7 1749 aa19.96■□□□□ 0.79
LETMD1-229ENST00000551261 HDGFP51858 240 aaKnown RBP19.95■□□□□ 0.78
LETMD1-229ENST00000551261 SLC24A1O60721 1099 aa19.94■□□□□ 0.78
LETMD1-229ENST00000551261 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.94■□□□□ 0.78
LETMD1-229ENST00000551261 MYO3AQ8NEV4 1616 aa19.94■□□□□ 0.78
LETMD1-229ENST00000551261 ADGRF5Q8IZF2 1346 aa19.92■□□□□ 0.78
LETMD1-229ENST00000551261 ZNF142P52746 1687 aaPredicted RBP19.91■□□□□ 0.78
LETMD1-229ENST00000551261 RIMS2Q9UQ26 1411 aa19.9■□□□□ 0.78
LETMD1-229ENST00000551261 ADGRB1O14514 1584 aa19.89■□□□□ 0.77
LETMD1-229ENST00000551261 C14orf93Q9H972 538 aaKnown RBP19.89■□□□□ 0.77
LETMD1-229ENST00000551261 SLIT1O75093 1534 aa19.88■□□□□ 0.77
LETMD1-229ENST00000551261 TMEM2Q9UHN6 1383 aa19.87■□□□□ 0.77
LETMD1-229ENST00000551261 NBPF1Q3BBV0 1214 aa19.86■□□□□ 0.77
LETMD1-229ENST00000551261 CEP170BQ9Y4F5 1589 aaPredicted RBP19.86■□□□□ 0.77
LETMD1-229ENST00000551261 ARHGAP23Q9P227 1491 aa19.86■□□□□ 0.77
LETMD1-229ENST00000551261 CCDC7Q96M83 1385 aa19.85■□□□□ 0.77
LETMD1-229ENST00000551261 SBNO2Q9Y2G9 1366 aa19.85■□□□□ 0.77
LETMD1-229ENST00000551261 WASHC2AQ641Q2 1341 aa19.82■□□□□ 0.76
LETMD1-229ENST00000551261 CFAP70Q5T0N1 1121 aa19.82■□□□□ 0.76
LETMD1-229ENST00000551261 SETD1BQ9UPS6 1966 aaKnown RBP19.82■□□□□ 0.76
LETMD1-229ENST00000551261 ALKQ9UM73 1620 aa19.81■□□□□ 0.76
LETMD1-229ENST00000551261 ST20-MTHFSA0A0A6YYL1 179 aa19.81■□□□□ 0.76
LETMD1-229ENST00000551261 THEMISQ8N1K5 641 aaPredicted RBP19.81■□□□□ 0.76
LETMD1-229ENST00000551261 PTPRMP28827 1452 aa19.8■□□□□ 0.76
LETMD1-229ENST00000551261 DIP2AQ14689 1571 aa19.8■□□□□ 0.76
LETMD1-229ENST00000551261 CDCA8Q53HL2 280 aa19.8■□□□□ 0.76
LETMD1-229ENST00000551261 CEBPAP49715 358 aaPredicted RBP19.79■□□□□ 0.76
LETMD1-229ENST00000551261 HIRIP3Q9BW71 556 aaPredicted RBP19.79■□□□□ 0.76
LETMD1-229ENST00000551261 PLEKHG1Q9ULL1 1385 aa19.79■□□□□ 0.76
LETMD1-229ENST00000551261 SETD1AO15047 1707 aaKnown RBP19.79■□□□□ 0.76
LETMD1-229ENST00000551261 KIF7Q2M1P5 1343 aa19.78■□□□□ 0.76
LETMD1-229ENST00000551261 NRXN3Q9Y4C0 1643 aa19.78■□□□□ 0.76
LETMD1-229ENST00000551261 ASXL1Q8IXJ9 1541 aa19.77■□□□□ 0.76
LETMD1-229ENST00000551261 DLC1Q96QB1 1528 aa19.77■□□□□ 0.76
LETMD1-229ENST00000551261 TMF1P82094 1093 aa19.77■□□□□ 0.76
LETMD1-229ENST00000551261 EID1Q9Y6B2 187 aa19.77■□□□□ 0.76
LETMD1-229ENST00000551261 ARHGEF28Q8N1W1 1705 aaKnown RBP19.76■□□□□ 0.75
LETMD1-229ENST00000551261 TESK2Q96S53 571 aa19.75■□□□□ 0.75
LETMD1-229ENST00000551261 KNDC1Q76NI1 1749 aa19.74■□□□□ 0.75
LETMD1-229ENST00000551261 YTHDC2Q9H6S0 1430 aaKnown RBP19.73■□□□□ 0.75
LETMD1-229ENST00000551261 CENPJQ9HC77 1338 aaPredicted RBP19.73■□□□□ 0.75
LETMD1-229ENST00000551261 QRICH2Q9H0J4 1663 aa19.72■□□□□ 0.75
LETMD1-229ENST00000551261 DDX10Q13206 875 aaKnown RBP19.72■□□□□ 0.75
LETMD1-229ENST00000551261 LRPPRCP42704 1394 aaKnown RBP19.7■□□□□ 0.74
LETMD1-229ENST00000551261 TECPR2O15040 1411 aa19.7■□□□□ 0.74
LETMD1-229ENST00000551261 NUTM2DQ5VT03 806 aaPredicted RBP19.69■□□□□ 0.74
LETMD1-229ENST00000551261 ABCC11Q96J66 1382 aa19.69■□□□□ 0.74
LETMD1-229ENST00000551261 MED14O60244 1454 aa19.68■□□□□ 0.74
LETMD1-229ENST00000551261 CPS1P31327 1500 aa19.68■□□□□ 0.74
LETMD1-229ENST00000551261 C11orf95C9JLR9 678 aaPredicted RBP19.68■□□□□ 0.74
LETMD1-229ENST00000551261 PUS7Q96PZ0 661 aaKnown RBP19.68■□□□□ 0.74
LETMD1-229ENST00000551261 PIK3R4Q99570 1358 aa19.67■□□□□ 0.74
LETMD1-229ENST00000551261 DISP3Q9P2K9 1392 aa19.67■□□□□ 0.74
LETMD1-229ENST00000551261 FAM135BQ49AJ0 1406 aa19.67■□□□□ 0.74
LETMD1-229ENST00000551261 ADAMTS13Q76LX8 1427 aa19.67■□□□□ 0.74
LETMD1-229ENST00000551261 TXNDC2Q86VQ3 553 aa19.66■□□□□ 0.74
LETMD1-229ENST00000551261 SIRT1Q96EB6 747 aa19.66■□□□□ 0.74
LETMD1-229ENST00000551261 ANP32CO43423 234 aa19.64■□□□□ 0.73
LETMD1-229ENST00000551261 TRAK1Q9UPV9 953 aa19.64■□□□□ 0.73
LETMD1-229ENST00000551261 TMEM132EQ6IEE7 984 aa19.63■□□□□ 0.73
LETMD1-229ENST00000551261 KTN1Q86UP2 1357 aaKnown RBP19.62■□□□□ 0.73
LETMD1-229ENST00000551261 TBX22Q9Y458 520 aa19.62■□□□□ 0.73
LETMD1-229ENST00000551261 NINLQ9Y2I6 1382 aa19.61■□□□□ 0.73
LETMD1-229ENST00000551261 LTKP29376 864 aa19.61■□□□□ 0.73
LETMD1-229ENST00000551261 PLPPR3Q6T4P5 718 aa19.61■□□□□ 0.73
LETMD1-229ENST00000551261 ANKLE2Q86XL3 938 aa19.61■□□□□ 0.73
LETMD1-229ENST00000551261 PTCH1Q13635 1447 aa19.6■□□□□ 0.73
LETMD1-229ENST00000551261 EVC2Q86UK5 1308 aa19.6■□□□□ 0.73
LETMD1-229ENST00000551261 MYOM1P52179 1685 aa19.59■□□□□ 0.73
LETMD1-229ENST00000551261 METP08581 1390 aa19.58■□□□□ 0.73
LETMD1-229ENST00000551261 BCANQ96GW7 911 aa19.58■□□□□ 0.72
LETMD1-229ENST00000551261 MIER1Q8N108 512 aa19.57■□□□□ 0.72
LETMD1-229ENST00000551261 ADGRB2O60241 1585 aa19.57■□□□□ 0.72
LETMD1-229ENST00000551261 TULP4Q9NRJ4 1543 aa19.56■□□□□ 0.72
LETMD1-229ENST00000551261 CCER2I3L3R5 266 aa19.56■□□□□ 0.72
LETMD1-229ENST00000551261 POGKQ9P215 609 aa19.56■□□□□ 0.72
LETMD1-229ENST00000551261 XRN1Q8IZH2 1706 aaKnown RBP19.56■□□□□ 0.72
LETMD1-229ENST00000551261 POLR3GLQ9BT43 218 aa19.55■□□□□ 0.72
LETMD1-229ENST00000551261 ATAD2Q6PL18 1390 aa19.55■□□□□ 0.72
LETMD1-229ENST00000551261 PRAM1Q96QH2 718 aa19.54■□□□□ 0.72
LETMD1-229ENST00000551261 NPHP4O75161 1426 aaPredicted RBP19.53■□□□□ 0.72
LETMD1-229ENST00000551261 STK26Q9P289 416 aa19.53■□□□□ 0.72
LETMD1-229ENST00000551261 NPC1L1Q9UHC9 1359 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms