RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 TROQ12816 1431 aaPredicted RBP15.67■□□□□ 0.1
ERBB3-219ENST00000551242 MAPK8IP3Q9UPT6 1336 aa15.66■□□□□ 0.1
ERBB3-219ENST00000551242 SYNJ2O15056 1496 aa15.66■□□□□ 0.1
ERBB3-219ENST00000551242 TRMT2AQ8IZ69 625 aaKnown RBP15.66■□□□□ 0.1
ERBB3-219ENST00000551242 CLUAP1Q96AJ1 413 aa15.66■□□□□ 0.1
ERBB3-219ENST00000551242 KNSTRNQ9Y448 316 aa15.66■□□□□ 0.1
ERBB3-219ENST00000551242 RRP9O43818 475 aaKnown RBP15.65■□□□□ 0.1
ERBB3-219ENST00000551242 CROCC2H7BZ55 1655 aa15.65■□□□□ 0.1
ERBB3-219ENST00000551242 TBC1D32Q96NH3 1257 aa15.64■□□□□ 0.09
ERBB3-219ENST00000551242 UPF2Q9HAU5 1272 aaKnown RBP15.64■□□□□ 0.09
ERBB3-219ENST00000551242 MAGI1Q96QZ7 1491 aaPredicted RBP15.64■□□□□ 0.09
ERBB3-219ENST00000551242 C9orf84Q5VXU9 1444 aa15.64■□□□□ 0.09
ERBB3-219ENST00000551242 PLB1Q6P1J6 1458 aa15.64■□□□□ 0.09
ERBB3-219ENST00000551242 CANXP27824 592 aaKnown RBP15.64■□□□□ 0.09
ERBB3-219ENST00000551242 NKTRP30414 1462 aaKnown RBP15.64■□□□□ 0.09
ERBB3-219ENST00000551242 KIAA0556O60303 1618 aa15.63■□□□□ 0.09
ERBB3-219ENST00000551242 TRAK2O60296 914 aa15.63■□□□□ 0.09
ERBB3-219ENST00000551242 CCDC144AA2RUR9 1427 aa15.63■□□□□ 0.09
ERBB3-219ENST00000551242 CGNL1Q0VF96 1302 aa15.62■□□□□ 0.09
ERBB3-219ENST00000551242 MAGI2Q86UL8 1455 aa15.62■□□□□ 0.09
ERBB3-219ENST00000551242 RAPGEF6Q8TEU7 1601 aa15.62■□□□□ 0.09
ERBB3-219ENST00000551242 GPRASP1Q5JY77 1395 aa15.62■□□□□ 0.09
ERBB3-219ENST00000551242 TSPY4P0CV99 314 aa15.62■□□□□ 0.09
ERBB3-219ENST00000551242 TSPY10P0CW01 314 aa15.62■□□□□ 0.09
ERBB3-219ENST00000551242 ERBB4Q15303 1308 aa15.62■□□□□ 0.09
ERBB3-219ENST00000551242 AMER1Q5JTC6 1135 aaPredicted RBP15.62■□□□□ 0.09
ERBB3-219ENST00000551242 ITSN2Q9NZM3 1697 aa15.61■□□□□ 0.09
ERBB3-219ENST00000551242 HNRNPMP52272 730 aaKnown RBP eCLIP15.6■□□□□ 0.09
ERBB3-219ENST00000551242 PDE3AQ14432 1141 aa15.59■□□□□ 0.09
ERBB3-219ENST00000551242 A2MP01023 1474 aa15.59■□□□□ 0.09
ERBB3-219ENST00000551242 ESPNB1AK53 854 aa15.59■□□□□ 0.09
ERBB3-219ENST00000551242 E9PSI1 815 aa15.59■□□□□ 0.09
ERBB3-219ENST00000551242 MRE11P49959 708 aa15.59■□□□□ 0.09
ERBB3-219ENST00000551242 MYH16Q9H6N6 1097 aa15.59■□□□□ 0.09
ERBB3-219ENST00000551242 PCDHB15Q9Y5E8 787 aa15.59■□□□□ 0.09
ERBB3-219ENST00000551242 PTPRGP23470 1445 aa15.58■□□□□ 0.09
ERBB3-219ENST00000551242 PRDM15P57071 1507 aaPredicted RBP15.58■□□□□ 0.09
ERBB3-219ENST00000551242 CENPJQ9HC77 1338 aaPredicted RBP15.58■□□□□ 0.08
ERBB3-219ENST00000551242 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.58■□□□□ 0.082e-8■□□□□ 10.7
ERBB3-219ENST00000551242 GRPEL1Q9HAV7 217 aa15.58■□□□□ 0.08
ERBB3-219ENST00000551242 PDZRN3Q9UPQ7 1066 aa15.58■□□□□ 0.08
ERBB3-219ENST00000551242 TNNQ9UQP3 1299 aa15.58■□□□□ 0.08
ERBB3-219ENST00000551242 WDR7Q9Y4E6 1490 aa15.57■□□□□ 0.08
ERBB3-219ENST00000551242 CARMIL2Q6F5E8 1435 aa15.56■□□□□ 0.08
ERBB3-219ENST00000551242 CHMP5Q9NZZ3 219 aa15.56■□□□□ 0.08
ERBB3-219ENST00000551242 FAM135AQ9P2D6 1515 aa15.55■□□□□ 0.08
ERBB3-219ENST00000551242 RLBP1P12271 317 aa15.55■□□□□ 0.08
ERBB3-219ENST00000551242 BCL2L13Q9BXK5 485 aa15.54■□□□□ 0.08
ERBB3-219ENST00000551242 CLASP1Q7Z460 1538 aa15.54■□□□□ 0.08
ERBB3-219ENST00000551242 PLA2R1Q13018 1463 aa15.54■□□□□ 0.08
ERBB3-219ENST00000551242 MFAP1P55081 439 aaKnown RBP15.54■□□□□ 0.08
ERBB3-219ENST00000551242 CDC42BPAQ5VT25 1732 aa15.54■□□□□ 0.08
ERBB3-219ENST00000551242 NEUROD2Q15784 382 aa15.53■□□□□ 0.08
ERBB3-219ENST00000551242 PMFBP1Q8TBY8 1022 aa15.53■□□□□ 0.08
ERBB3-219ENST00000551242 NUP160Q12769 1436 aa15.52■□□□□ 0.08
ERBB3-219ENST00000551242 PLEKHD1A6NEE1 506 aa15.52■□□□□ 0.08
ERBB3-219ENST00000551242 C22orf23Q9BZE7 217 aa15.52■□□□□ 0.08
ERBB3-219ENST00000551242 GAS2L3Q86XJ1 694 aa15.52■□□□□ 0.07
ERBB3-219ENST00000551242 TRIM44Q96DX7 344 aaPredicted RBP15.52■□□□□ 0.07
ERBB3-219ENST00000551242 SHANK2Q9UPX8 1470 aa15.51■□□□□ 0.07
ERBB3-219ENST00000551242 ADCY10Q96PN6 1610 aa15.51■□□□□ 0.07
ERBB3-219ENST00000551242 PIK3C2GO75747 1445 aa15.5■□□□□ 0.07
ERBB3-219ENST00000551242 WWC1Q8IX03 1113 aa15.5■□□□□ 0.07
ERBB3-219ENST00000551242 RRP7AQ9Y3A4 280 aaKnown RBP15.5■□□□□ 0.07
ERBB3-219ENST00000551242 ABCC10Q5T3U5 1492 aa15.49■□□□□ 0.07
ERBB3-219ENST00000551242 RARSP54136 660 aaKnown RBP15.48■□□□□ 0.07
ERBB3-219ENST00000551242 LAMC1P11047 1609 aa15.48■□□□□ 0.07
ERBB3-219ENST00000551242 DDX11L8A8MPP1 907 aa15.48■□□□□ 0.07
ERBB3-219ENST00000551242 ZNF692Q9BU19 519 aaPredicted RBP15.48■□□□□ 0.07
ERBB3-219ENST00000551242 ASXL1Q8IXJ9 1541 aa15.48■□□□□ 0.07
ERBB3-219ENST00000551242 NINLQ9Y2I6 1382 aa15.47■□□□□ 0.07
ERBB3-219ENST00000551242 RTEL1-TNFRSF6BF6WH68 1400 aa15.47■□□□□ 0.07
ERBB3-219ENST00000551242 ABCC2Q92887 1545 aa15.47■□□□□ 0.07
ERBB3-219ENST00000551242 RWDD1Q9H446 243 aaPredicted RBP15.47■□□□□ 0.07
ERBB3-219ENST00000551242 HSCBQ8IWL3 235 aa15.46■□□□□ 0.07
ERBB3-219ENST00000551242 KIAA1211Q6ZU35 1233 aa15.45■□□□□ 0.06
ERBB3-219ENST00000551242 MYO5CQ9NQX4 1742 aa15.45■□□□□ 0.06
ERBB3-219ENST00000551242 TNPO1Q92973 898 aaKnown RBP15.44■□□□□ 0.06
ERBB3-219ENST00000551242 CCDC141Q6ZP82 1450 aa15.44■□□□□ 0.06
ERBB3-219ENST00000551242 TPM2P07951 284 aa15.44■□□□□ 0.06
ERBB3-219ENST00000551242 PDCL3Q9H2J4 239 aa15.43■□□□□ 0.06
ERBB3-219ENST00000551242 EIF2AK4Q9P2K8 1649 aaKnown RBP15.43■□□□□ 0.06
ERBB3-219ENST00000551242 CDCA8Q53HL2 280 aa15.42■□□□□ 0.06
ERBB3-219ENST00000551242 FOXD4L1Q9NU39 408 aa15.41■□□□□ 0.06
ERBB3-219ENST00000551242 ISY1Q9ULR0 285 aaKnown RBP15.41■□□□□ 0.06
ERBB3-219ENST00000551242 ZMYM3Q14202 1370 aa15.41■□□□□ 0.06
ERBB3-219ENST00000551242 ATP10BO94823 1461 aa15.41■□□□□ 0.06
ERBB3-219ENST00000551242 RBM10P98175 930 aaKnown RBP15.41■□□□□ 0.06
ERBB3-219ENST00000551242 TNNT2P45379 298 aaPredicted RBP15.41■□□□□ 0.06
ERBB3-219ENST00000551242 DDIT3P35638 169 aa15.4■□□□□ 0.06
ERBB3-219ENST00000551242 SYNMO15061 1565 aa15.39■□□□□ 0.05
ERBB3-219ENST00000551242 CARD14Q9BXL6 1004 aa15.39■□□□□ 0.05
ERBB3-219ENST00000551242 CHD1O14646 1710 aa15.39■□□□□ 0.05
ERBB3-219ENST00000551242 PLXNC1O60486 1568 aa15.39■□□□□ 0.05
ERBB3-219ENST00000551242 AAMPQ13685 434 aa15.39■□□□□ 0.05
ERBB3-219ENST00000551242 TCP11L2Q8N4U5 519 aa15.38■□□□□ 0.05
ERBB3-219ENST00000551242 NGEFQ8N5V2 710 aa15.38■□□□□ 0.05
ERBB3-219ENST00000551242 MVPQ14764 893 aaKnown RBP15.38■□□□□ 0.05
ERBB3-219ENST00000551242 NPC1L1Q9UHC9 1359 aa15.38■□□□□ 0.05
ERBB3-219ENST00000551242 HSP90AB1P08238 724 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms