RNA–Protein interactions for RNA: ENST00000551160.5

BEST3-210, Transcript of bestrophin 3, humanhuman

TSL 3 BASIC

Gene BEST3, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-210ENST00000551160 NOS1P29475 1434 aa16.24■□□□□ 0.19
BEST3-210ENST00000551160 FGD6Q6ZV73 1430 aa16.24■□□□□ 0.19
BEST3-210ENST00000551160 LMTK2Q8IWU2 1503 aa16.24■□□□□ 0.19
BEST3-210ENST00000551160 KDM5AP29375 1690 aaKnown RBP16.24■□□□□ 0.19
BEST3-210ENST00000551160 VPS8Q8N3P4 1428 aa16.22■□□□□ 0.19
BEST3-210ENST00000551160 ZFYVE9O95405 1425 aa16.21■□□□□ 0.19
BEST3-210ENST00000551160 RXRBP28702 533 aa16.21■□□□□ 0.19
BEST3-210ENST00000551160 PLEKHG1Q9ULL1 1385 aa16.21■□□□□ 0.19
BEST3-210ENST00000551160 C14orf37Q86TY3 774 aa16.2■□□□□ 0.18
BEST3-210ENST00000551160 DAPK1P53355 1430 aa16.19■□□□□ 0.18
BEST3-210ENST00000551160 PPP1R15AO75807 674 aaPredicted RBP16.19■□□□□ 0.18
BEST3-210ENST00000551160 SLC52A1Q9NWF4 448 aa16.18■□□□□ 0.18
BEST3-210ENST00000551160 AHDC1Q5TGY3 1603 aaPredicted RBP16.18■□□□□ 0.18
BEST3-210ENST00000551160 RIMS2Q9UQ26 1411 aa16.18■□□□□ 0.18
BEST3-210ENST00000551160 NUTM2BA6NNL0 878 aaPredicted RBP16.17■□□□□ 0.18
BEST3-210ENST00000551160 NUTM2EB1AL46 878 aaPredicted RBP16.17■□□□□ 0.18
BEST3-210ENST00000551160 NUTM2AQ8IVF1 878 aaPredicted RBP16.17■□□□□ 0.18
BEST3-210ENST00000551160 CHIC2Q9UKJ5 165 aa16.17■□□□□ 0.18
BEST3-210ENST00000551160 NCOA3Q9Y6Q9 1424 aa16.17■□□□□ 0.18
BEST3-210ENST00000551160 CROCC2H7BZ55 1655 aa16.17■□□□□ 0.18
BEST3-210ENST00000551160 CDK12Q9NYV4 1490 aaPredicted RBP16.16■□□□□ 0.18
BEST3-210ENST00000551160 CADPS2Q86UW7 1296 aa16.15■□□□□ 0.18
BEST3-210ENST00000551160 AFF2P51816 1311 aa16.15■□□□□ 0.18
BEST3-210ENST00000551160 ANKRD30AQ9BXX3 1397 aa16.14■□□□□ 0.17
BEST3-210ENST00000551160 ATF3P18847 181 aa16.14■□□□□ 0.17
BEST3-210ENST00000551160 BRINP3Q76B58 766 aa16.14■□□□□ 0.17
BEST3-210ENST00000551160 C19orf44Q9H6X5 657 aa16.14■□□□□ 0.17
BEST3-210ENST00000551160 TBX22Q9Y458 520 aa16.14■□□□□ 0.17
BEST3-210ENST00000551160 SHPRHQ149N8 1683 aa16.14■□□□□ 0.17
BEST3-210ENST00000551160 ADAMTS13Q76LX8 1427 aa16.13■□□□□ 0.17
BEST3-210ENST00000551160 PTPN23Q9H3S7 1636 aa16.13■□□□□ 0.17
BEST3-210ENST00000551160 SRCAPQ6ZRS2 3230 aa16.13■□□□□ 0.17
BEST3-210ENST00000551160 NUTM2DQ5VT03 806 aaPredicted RBP16.13■□□□□ 0.17
BEST3-210ENST00000551160 DIP2AQ14689 1571 aa16.13■□□□□ 0.17
BEST3-210ENST00000551160 RGS12O14924 1447 aa16.12■□□□□ 0.17
BEST3-210ENST00000551160 CHD2O14647 1828 aaKnown RBP16.12■□□□□ 0.17
BEST3-210ENST00000551160 RPRD2Q5VT52 1461 aaKnown RBP16.1■□□□□ 0.17
BEST3-210ENST00000551160 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.09■□□□□ 0.17
BEST3-210ENST00000551160 CHGAP10645 457 aaKnown RBP16.09■□□□□ 0.17
BEST3-210ENST00000551160 HDGFP51858 240 aaKnown RBP16.09■□□□□ 0.17
BEST3-210ENST00000551160 C8orf37Q96NL8 207 aa16.08■□□□□ 0.16
BEST3-210ENST00000551160 ASXL1Q8IXJ9 1541 aa16.08■□□□□ 0.16
BEST3-210ENST00000551160 TMEM131LA2VDJ0 1609 aa16.08■□□□□ 0.16
BEST3-210ENST00000551160 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.07■□□□□ 0.16
BEST3-210ENST00000551160 PIK3R4Q99570 1358 aa16.07■□□□□ 0.16
BEST3-210ENST00000551160 PTPRUQ92729 1446 aa16.07■□□□□ 0.16
BEST3-210ENST00000551160 SETD5Q9C0A6 1442 aa16.07■□□□□ 0.16
BEST3-210ENST00000551160 AMOTL2Q9Y2J4 779 aa16.06■□□□□ 0.16
BEST3-210ENST00000551160 GCC2Q8IWJ2 1684 aa16.05■□□□□ 0.16
BEST3-210ENST00000551160 RBM6P78332 1123 aaKnown RBP16.05■□□□□ 0.16
BEST3-210ENST00000551160 DDX17Q92841 729 aaKnown RBP16.05■□□□□ 0.16
BEST3-210ENST00000551160 QTRT2Q9H974 415 aaKnown RBP16.05■□□□□ 0.16
BEST3-210ENST00000551160 ADGRL2O95490 1459 aa16.03■□□□□ 0.16
BEST3-210ENST00000551160 DCCP43146 1447 aa16.03■□□□□ 0.16
BEST3-210ENST00000551160 MST1RQ04912 1400 aa16.03■□□□□ 0.16
BEST3-210ENST00000551160 ANKRD50Q9ULJ7 1429 aa16.03■□□□□ 0.16
BEST3-210ENST00000551160 MYO5BQ9ULV0 1848 aa16.03■□□□□ 0.16
BEST3-210ENST00000551160 PNPLA6Q8IY17 1366 aa16.03■□□□□ 0.16
BEST3-210ENST00000551160 LOC105371045A0A1W2PR82 267 aa16.03■□□□□ 0.16
BEST3-210ENST00000551160 TRPM2O94759 1503 aa16.01■□□□□ 0.15
BEST3-210ENST00000551160 LRRC59Q96AG4 307 aaKnown RBP16.01■□□□□ 0.15
BEST3-210ENST00000551160 ADAMTS2O95450 1211 aa16■□□□□ 0.15
BEST3-210ENST00000551160 ATAD2Q6PL18 1390 aa16■□□□□ 0.15
BEST3-210ENST00000551160 NGLY1Q96IV0 654 aa15.97■□□□□ 0.15
BEST3-210ENST00000551160 NHSL1Q5SYE7 1610 aa15.97■□□□□ 0.15
BEST3-210ENST00000551160 UNC13BO14795 1591 aa15.96■□□□□ 0.15
BEST3-210ENST00000551160 FAM50AQ14320 339 aaKnown RBP15.96■□□□□ 0.15
BEST3-210ENST00000551160 METP08581 1390 aa15.96■□□□□ 0.15
BEST3-210ENST00000551160 XRN1Q8IZH2 1706 aaKnown RBP15.95■□□□□ 0.14
BEST3-210ENST00000551160 APLP2Q06481 763 aa15.95■□□□□ 0.14
BEST3-210ENST00000551160 ZRANB1Q9UGI0 708 aa15.95■□□□□ 0.14
BEST3-210ENST00000551160 SETBP1Q9Y6X0 1596 aa15.95■□□□□ 0.14
BEST3-210ENST00000551160 ADGRL3Q9HAR2 1447 aa15.94■□□□□ 0.14
BEST3-210ENST00000551160 USP21Q9UK80 565 aa15.93■□□□□ 0.14
BEST3-210ENST00000551160 NRXN3Q9Y4C0 1643 aa15.93■□□□□ 0.14
BEST3-210ENST00000551160 E9PCH4 1651 aa15.92■□□□□ 0.14
BEST3-210ENST00000551160 TRPC5Q9UL62 973 aaPredicted RBP15.91■□□□□ 0.14
BEST3-210ENST00000551160 C1orf167Q5SNV9 1468 aa15.91■□□□□ 0.14
BEST3-210ENST00000551160 ATRNO75882 1429 aa15.9■□□□□ 0.14
BEST3-210ENST00000551160 FNBP4Q8N3X1 1017 aaPredicted RBP15.88■□□□□ 0.13
BEST3-210ENST00000551160 SOS2Q07890 1332 aaPredicted RBP15.88■□□□□ 0.13
BEST3-210ENST00000551160 FOXD1Q16676 465 aa15.87■□□□□ 0.13
BEST3-210ENST00000551160 PTCH1Q13635 1447 aa15.86■□□□□ 0.13
BEST3-210ENST00000551160 ZNF326Q5BKZ1 582 aaKnown RBP15.86■□□□□ 0.13
BEST3-210ENST00000551160 ORAI2Q96SN7 254 aa15.86■□□□□ 0.13
BEST3-210ENST00000551160 NUP155O75694 1391 aa15.86■□□□□ 0.13
BEST3-210ENST00000551160 IQGAP3Q86VI3 1631 aa15.85■□□□□ 0.13
BEST3-210ENST00000551160 NALCNQ8IZF0 1738 aa15.85■□□□□ 0.13
BEST3-210ENST00000551160 CCDC125Q86Z20 511 aa15.82■□□□□ 0.12
BEST3-210ENST00000551160 ROBO2Q9HCK4 1378 aa15.82■□□□□ 0.12
BEST3-210ENST00000551160 MYOM2P54296 1465 aa15.82■□□□□ 0.12
BEST3-210ENST00000551160 BCL9LQ86UU0 1499 aa15.82■□□□□ 0.12
BEST3-210ENST00000551160 LAMC1P11047 1609 aa15.82■□□□□ 0.12
BEST3-210ENST00000551160 EP400Q96L91 3159 aa15.81■□□□□ 0.12
BEST3-210ENST00000551160 ROCK1Q13464 1354 aa15.81■□□□□ 0.12
BEST3-210ENST00000551160 NEXMIFQ5QGS0 1516 aa15.78■□□□□ 0.12
BEST3-210ENST00000551160 GJD4Q96KN9 370 aaPredicted RBP15.78■□□□□ 0.12
BEST3-210ENST00000551160 COL22A1Q8NFW1 1626 aaPredicted RBP15.77■□□□□ 0.12
BEST3-210ENST00000551160 XPCQ01831 940 aaPredicted RBP15.77■□□□□ 0.12
BEST3-210ENST00000551160 DEFB132Q7Z7B7 95 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms