RNA–Protein interactions for RNA: ENST00000551088.1

TMTC3-204, Transcript of transmembrane and tetratricopeptide repeat containing 3, humanhuman

TSL 3

Gene TMTC3, Length 646 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC3-204ENST00000551088 FHOD3Q2V2M9 1422 aa15.31■□□□□ 0.04
TMTC3-204ENST00000551088 NUP153P49790 1475 aaKnown RBP15.29■□□□□ 0.04
TMTC3-204ENST00000551088 PPP1R15BQ5SWA1 713 aa15.29■□□□□ 0.04
TMTC3-204ENST00000551088 BBXQ8WY36 941 aaPredicted RBP15.29■□□□□ 0.04
TMTC3-204ENST00000551088 AXIN2Q9Y2T1 843 aa15.29■□□□□ 0.04
TMTC3-204ENST00000551088 PHLDB1Q86UU1 1377 aa15.28■□□□□ 0.04
TMTC3-204ENST00000551088 NCKAP5LQ9HCH0 1330 aa15.27■□□□□ 0.04
TMTC3-204ENST00000551088 PDE4AP27815 886 aa15.27■□□□□ 0.04
TMTC3-204ENST00000551088 POTEEQ6S8J3 1075 aa15.27■□□□□ 0.04
TMTC3-204ENST00000551088 VSIG10Q8N0Z9 540 aa15.27■□□□□ 0.04
TMTC3-204ENST00000551088 NEO1Q92859 1461 aa15.27■□□□□ 0.03
TMTC3-204ENST00000551088 UPF1Q92900 1129 aaKnown RBP eCLIP15.26■□□□□ 0.03
TMTC3-204ENST00000551088 EFCAB5A4FU69 1503 aa15.26■□□□□ 0.03
TMTC3-204ENST00000551088 CFAP74Q9C0B2 1584 aa15.25■□□□□ 0.03
TMTC3-204ENST00000551088 RAPGEF3O95398 923 aa15.25■□□□□ 0.03
TMTC3-204ENST00000551088 RICTORQ6R327 1708 aa15.24■□□□□ 0.03
TMTC3-204ENST00000551088 PLEKHD1A6NEE1 506 aa15.24■□□□□ 0.03
TMTC3-204ENST00000551088 PAXIP1Q6ZW49 1069 aaPredicted RBP15.24■□□□□ 0.03
TMTC3-204ENST00000551088 OXER1Q8TDS5 423 aa15.24■□□□□ 0.03
TMTC3-204ENST00000551088 ADAMTSL3P82987 1691 aa15.24■□□□□ 0.03
TMTC3-204ENST00000551088 FRMPD1Q5SYB0 1578 aa15.24■□□□□ 0.03
TMTC3-204ENST00000551088 BCORL1Q5H9F3 1711 aa15.23■□□□□ 0.03
TMTC3-204ENST00000551088 BCANQ96GW7 911 aa15.23■□□□□ 0.03
TMTC3-204ENST00000551088 CFAP44Q96MT7 982 aa15.23■□□□□ 0.03
TMTC3-204ENST00000551088 ARHGAP33O14559 1287 aa15.22■□□□□ 0.03
TMTC3-204ENST00000551088 PPP4R3BQ5MIZ7 849 aa15.22■□□□□ 0.03
TMTC3-204ENST00000551088 ARID4BQ4LE39 1312 aaPredicted RBP15.2■□□□□ 0.02
TMTC3-204ENST00000551088 TTC37Q6PGP7 1564 aa15.2■□□□□ 0.02
TMTC3-204ENST00000551088 LARP6Q9BRS8 491 aaKnown RBP15.2■□□□□ 0.02
TMTC3-204ENST00000551088 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.2■□□□□ 0.02
TMTC3-204ENST00000551088 MADDQ8WXG6 1647 aa15.19■□□□□ 0.02
TMTC3-204ENST00000551088 DDX27Q96GQ7 796 aaKnown RBP15.19■□□□□ 0.02
TMTC3-204ENST00000551088 RIMS1Q86UR5 1692 aaKnown RBP15.19■□□□□ 0.02
TMTC3-204ENST00000551088 CDK13Q14004 1512 aaKnown RBP15.18■□□□□ 0.02
TMTC3-204ENST00000551088 UBTFP17480 764 aaKnown RBP15.18■□□□□ 0.02
TMTC3-204ENST00000551088 MYO5CQ9NQX4 1742 aa15.17■□□□□ 0.02
TMTC3-204ENST00000551088 FANCAO15360 1455 aa15.17■□□□□ 0.02
TMTC3-204ENST00000551088 DENND4BO75064 1496 aaPredicted RBP15.17■□□□□ 0.02
TMTC3-204ENST00000551088 PTPRMP28827 1452 aa15.17■□□□□ 0.02
TMTC3-204ENST00000551088 ATP1B4Q9UN42 357 aaPredicted RBP15.17■□□□□ 0.02
TMTC3-204ENST00000551088 ARHGEF40Q8TER5 1519 aa15.17■□□□□ 0.02
TMTC3-204ENST00000551088 AKNAQ7Z591 1439 aa15.17■□□□□ 0.02
TMTC3-204ENST00000551088 HECW1Q76N89 1606 aa15.15■□□□□ 0.02
TMTC3-204ENST00000551088 ADGRD1Q6QNK2 874 aa15.14■□□□□ 0.01
TMTC3-204ENST00000551088 PSEN2P49810 448 aa15.13■□□□□ 0.01
TMTC3-204ENST00000551088 LRRIQ1Q96JM4 1722 aa15.13■□□□□ 0.01
TMTC3-204ENST00000551088 FER1L4A9Z1Z3 1794 aa15.12■□□□□ 0.01
TMTC3-204ENST00000551088 SIGLEC1Q9BZZ2 1709 aa15.11■□□□□ 0.01
TMTC3-204ENST00000551088 FMN1Q68DA7 1419 aa15.1■□□□□ 0.01
TMTC3-204ENST00000551088 MFSD10Q14728 455 aa15.1■□□□□ 0.01
TMTC3-204ENST00000551088 ZNF454Q8N9F8 522 aa15.1■□□□□ 0.01
TMTC3-204ENST00000551088 ZMYM4Q5VZL5 1548 aa15.1■□□□□ 0.01
TMTC3-204ENST00000551088 ZFYVE16Q7Z3T8 1539 aa15.1■□□□□ 0.01
TMTC3-204ENST00000551088 DMRTA1Q5VZB9 504 aa15.09■□□□□ 0.01
TMTC3-204ENST00000551088 KCNK17Q96T54 332 aa15.09■□□□□ 0.01
TMTC3-204ENST00000551088 KDM2AQ9Y2K7 1162 aa15.09■□□□□ 0.01
TMTC3-204ENST00000551088 ARHGAP35Q9NRY4 1499 aa15.08■□□□□ 0.01
TMTC3-204ENST00000551088 KIF14Q15058 1648 aa15.08■□□□□ 0
TMTC3-204ENST00000551088 CADPS2Q86UW7 1296 aa15.08■□□□□ 0
TMTC3-204ENST00000551088 POGZQ7Z3K3 1410 aa15.08■□□□□ 0
TMTC3-204ENST00000551088 SPRYD3Q8NCJ5 442 aa15.07■□□□□ 0
TMTC3-204ENST00000551088 PCF11O94913 1555 aaKnown RBP15.07■□□□□ 0
TMTC3-204ENST00000551088 TK2O00142 265 aa15.06■□□□□ 0
TMTC3-204ENST00000551088 CDK11AQ9UQ88 783 aaPredicted RBP15.06■□□□□ 0
TMTC3-204ENST00000551088 PLCH2O75038 1416 aa15.06■□□□□ 0
TMTC3-204ENST00000551088 SCAPERQ9BY12 1400 aa15.06■□□□□ 0
TMTC3-204ENST00000551088 YEATS2Q9ULM3 1422 aa15.06■□□□□ 0
TMTC3-204ENST00000551088 EVI5O60447 810 aa15.05■□□□□ -0
TMTC3-204ENST00000551088 MAGI2Q86UL8 1455 aa15.05■□□□□ -0
TMTC3-204ENST00000551088 CDC42BPBQ9Y5S2 1711 aa15.05■□□□□ -0
TMTC3-204ENST00000551088 MLECQ14165 292 aa15.04■□□□□ -0
TMTC3-204ENST00000551088 PRKCSHP14314 528 aaPredicted RBP15.03■□□□□ -0
TMTC3-204ENST00000551088 MAP3K9P80192 1104 aa15.03■□□□□ -0
TMTC3-204ENST00000551088 ARHGAP5Q13017 1502 aa15.02■□□□□ -0
TMTC3-204ENST00000551088 FOSBP53539 338 aa15.02■□□□□ -0
TMTC3-204ENST00000551088 EFCAB2Q5VUJ9 269 aa15.02■□□□□ -0
TMTC3-204ENST00000551088 LMTK3Q96Q04 1460 aa15.01□□□□□ -0.01
TMTC3-204ENST00000551088 CLIP1P30622 1438 aa15.01□□□□□ -0.01
TMTC3-204ENST00000551088 ANO8Q9HCE9 1232 aaPredicted RBP15.01□□□□□ -0.01
TMTC3-204ENST00000551088 BCL2L12Q9HB09 334 aa15□□□□□ -0.01
TMTC3-204ENST00000551088 EMILIN3Q9NT22 766 aa15□□□□□ -0.01
TMTC3-204ENST00000551088 TROQ12816 1431 aaPredicted RBP15□□□□□ -0.01
TMTC3-204ENST00000551088 HRO43593 1189 aa14.99□□□□□ -0.01
TMTC3-204ENST00000551088 CDC42BPAQ5VT25 1732 aa14.98□□□□□ -0.01
TMTC3-204ENST00000551088 ATP10AO60312 1499 aa14.98□□□□□ -0.01
TMTC3-204ENST00000551088 TSHZ2Q9NRE2 1034 aa14.98□□□□□ -0.01
TMTC3-204ENST00000551088 SETD1BQ9UPS6 1966 aaKnown RBP14.98□□□□□ -0.01
TMTC3-204ENST00000551088 PREX1Q8TCU6 1659 aa14.97□□□□□ -0.01
TMTC3-204ENST00000551088 PREX2Q70Z35 1606 aa14.97□□□□□ -0.01
TMTC3-204ENST00000551088 STAC3Q96MF2 364 aa14.97□□□□□ -0.01
TMTC3-204ENST00000551088 C9orf84Q5VXU9 1444 aa14.97□□□□□ -0.01
TMTC3-204ENST00000551088 ITSN2Q9NZM3 1697 aa14.97□□□□□ -0.01
TMTC3-204ENST00000551088 ZNF518AQ6AHZ1 1483 aa14.96□□□□□ -0.01
TMTC3-204ENST00000551088 PTPREP23469 700 aa14.96□□□□□ -0.01
TMTC3-204ENST00000551088 HSPA2P54652 639 aa14.96□□□□□ -0.01
TMTC3-204ENST00000551088 FBXO41Q8TF61 875 aa14.96□□□□□ -0.01
TMTC3-204ENST00000551088 CCDC18Q5T9S5 1454 aa14.95□□□□□ -0.02
TMTC3-204ENST00000551088 KDM5CP41229 1560 aa14.94□□□□□ -0.02
TMTC3-204ENST00000551088 ARHGEF12Q9NZN5 1544 aa14.94□□□□□ -0.02
TMTC3-204ENST00000551088 ZDHHC16Q969W1 377 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms