RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 CCDC125Q86Z20 511 aa18.5■□□□□ 0.55
GPN3-208ENST00000550974 ATF3P18847 181 aa18.49■□□□□ 0.55
GPN3-208ENST00000550974 CADPS2Q86UW7 1296 aa18.49■□□□□ 0.55
GPN3-208ENST00000550974 CAMSAP2Q08AD1 1489 aa18.48■□□□□ 0.55
GPN3-208ENST00000550974 TSPY4P0CV99 314 aa18.48■□□□□ 0.55
GPN3-208ENST00000550974 TSPY10P0CW01 314 aa18.48■□□□□ 0.55
GPN3-208ENST00000550974 CEP152O94986 1710 aa18.48■□□□□ 0.55
GPN3-208ENST00000550974 BRINP3Q76B58 766 aa18.47■□□□□ 0.55
GPN3-208ENST00000550974 EFCAB6Q5THR3 1501 aa18.46■□□□□ 0.55
GPN3-208ENST00000550974 ADAMTS2O95450 1211 aa18.44■□□□□ 0.54
GPN3-208ENST00000550974 C19orf44Q9H6X5 657 aa18.44■□□□□ 0.54
GPN3-208ENST00000550974 MROH1Q8NDA8 1641 aa18.43■□□□□ 0.54
GPN3-208ENST00000550974 IDI1Q13907 227 aa18.43■□□□□ 0.54
GPN3-208ENST00000550974 MAST1Q9Y2H9 1570 aa18.42■□□□□ 0.54
GPN3-208ENST00000550974 LRP5O75197 1615 aa18.42■□□□□ 0.54
GPN3-208ENST00000550974 SETD5Q9C0A6 1442 aa18.42■□□□□ 0.54
GPN3-208ENST00000550974 NCOA3Q9Y6Q9 1424 aa18.42■□□□□ 0.54
GPN3-208ENST00000550974 LRRC59Q96AG4 307 aaKnown RBP18.42■□□□□ 0.54
GPN3-208ENST00000550974 USP21Q9UK80 565 aa18.42■□□□□ 0.54
GPN3-208ENST00000550974 TRPC5Q9UL62 973 aaPredicted RBP18.41■□□□□ 0.54
GPN3-208ENST00000550974 ARHGAP31Q2M1Z3 1444 aa18.4■□□□□ 0.54
GPN3-208ENST00000550974 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.4■□□□□ 0.54
GPN3-208ENST00000550974 EIF2AK4Q9P2K8 1649 aaKnown RBP18.38■□□□□ 0.53
GPN3-208ENST00000550974 DEFB132Q7Z7B7 95 aa18.37■□□□□ 0.53
GPN3-208ENST00000550974 PNPLA6Q8IY17 1366 aa18.37■□□□□ 0.53
GPN3-208ENST00000550974 CHD2O14647 1828 aaKnown RBP18.37■□□□□ 0.53
GPN3-208ENST00000550974 YY1P25490 414 aa18.36■□□□□ 0.53
GPN3-208ENST00000550974 ASXL1Q8IXJ9 1541 aa18.35■□□□□ 0.53
GPN3-208ENST00000550974 DDX17Q92841 729 aaKnown RBP18.35■□□□□ 0.53
GPN3-208ENST00000550974 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.34■□□□□ 0.53
GPN3-208ENST00000550974 ARHGEF5Q12774 1597 aa18.34■□□□□ 0.53
GPN3-208ENST00000550974 CEP162Q5TB80 1403 aa18.33■□□□□ 0.53
GPN3-208ENST00000550974 PSDA5PKW4 1024 aaPredicted RBP18.33■□□□□ 0.52
GPN3-208ENST00000550974 PPP1R15AO75807 674 aaPredicted RBP18.33■□□□□ 0.52
GPN3-208ENST00000550974 IFFO2Q5TF58 517 aa18.33■□□□□ 0.52
GPN3-208ENST00000550974 EHBP1L1Q8N3D4 1523 aa18.33■□□□□ 0.52
GPN3-208ENST00000550974 BLMP54132 1417 aaPredicted RBP18.32■□□□□ 0.52
GPN3-208ENST00000550974 PLEKHG1Q9ULL1 1385 aa18.31■□□□□ 0.52
GPN3-208ENST00000550974 TBX22Q9Y458 520 aa18.31■□□□□ 0.52
GPN3-208ENST00000550974 EP400Q96L91 3159 aa18.3■□□□□ 0.52
GPN3-208ENST00000550974 ATRNO75882 1429 aa18.3■□□□□ 0.52
GPN3-208ENST00000550974 ADGRB3O60242 1522 aa18.29■□□□□ 0.52
GPN3-208ENST00000550974 HRCP23327 699 aa18.29■□□□□ 0.52
GPN3-208ENST00000550974 SF3B2Q13435 895 aaKnown RBP18.29■□□□□ 0.52
GPN3-208ENST00000550974 FNBP4Q8N3X1 1017 aaPredicted RBP18.29■□□□□ 0.52
GPN3-208ENST00000550974 NHSL1Q5SYE7 1610 aa18.28■□□□□ 0.52
GPN3-208ENST00000550974 HDGFP51858 240 aaKnown RBP18.26■□□□□ 0.51
GPN3-208ENST00000550974 ZFYVE9O95405 1425 aa18.24■□□□□ 0.51
GPN3-208ENST00000550974 MST1RQ04912 1400 aa18.24■□□□□ 0.51
GPN3-208ENST00000550974 DUOX2Q9NRD8 1548 aa18.24■□□□□ 0.51
GPN3-208ENST00000550974 KANK1Q14678 1352 aa18.23■□□□□ 0.51
GPN3-208ENST00000550974 AMOTL2Q9Y2J4 779 aa18.23■□□□□ 0.51
GPN3-208ENST00000550974 DCCP43146 1447 aa18.23■□□□□ 0.51
GPN3-208ENST00000550974 RIMS2Q9UQ26 1411 aa18.23■□□□□ 0.51
GPN3-208ENST00000550974 GJD4Q96KN9 370 aaPredicted RBP18.22■□□□□ 0.51
GPN3-208ENST00000550974 SLC52A1Q9NWF4 448 aa18.22■□□□□ 0.51
GPN3-208ENST00000550974 PTCH1Q13635 1447 aa18.2■□□□□ 0.5
GPN3-208ENST00000550974 NOS1P29475 1434 aa18.19■□□□□ 0.5
GPN3-208ENST00000550974 ADAMTS13Q76LX8 1427 aa18.19■□□□□ 0.5
GPN3-208ENST00000550974 PIK3R4Q99570 1358 aa18.18■□□□□ 0.5
GPN3-208ENST00000550974 BCL9LQ86UU0 1499 aa18.18■□□□□ 0.5
GPN3-208ENST00000550974 RRP7BPQ9NSQ0 103 aa18.17■□□□□ 0.5
GPN3-208ENST00000550974 KIF15Q9NS87 1388 aa18.17■□□□□ 0.5
GPN3-208ENST00000550974 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.16■□□□□ 0.5
GPN3-208ENST00000550974 PTPRUQ92729 1446 aa18.15■□□□□ 0.5
GPN3-208ENST00000550974 ERBINQ96RT1 1412 aa18.15■□□□□ 0.5
GPN3-208ENST00000550974 CHGAP10645 457 aaKnown RBP18.14■□□□□ 0.49
GPN3-208ENST00000550974 R3HDM1Q15032 1099 aaKnown RBP18.13■□□□□ 0.49
GPN3-208ENST00000550974 LMTK2Q8IWU2 1503 aa18.13■□□□□ 0.49
GPN3-208ENST00000550974 SENP3-EIF4A1A0A087X0R7 540 aa18.12■□□□□ 0.49
GPN3-208ENST00000550974 BAG6P46379 1132 aa18.12■□□□□ 0.49
GPN3-208ENST00000550974 TRPM2O94759 1503 aa18.12■□□□□ 0.49
GPN3-208ENST00000550974 UNC13BO14795 1591 aa18.11■□□□□ 0.49
GPN3-208ENST00000550974 MYO5BQ9ULV0 1848 aa18.11■□□□□ 0.49
GPN3-208ENST00000550974 SOS2Q07890 1332 aaPredicted RBP18.1■□□□□ 0.49
GPN3-208ENST00000550974 RALGAPBQ86X10 1494 aa18.08■□□□□ 0.49
GPN3-208ENST00000550974 SEPT12Q8IYM1 358 aa18.08■□□□□ 0.48
GPN3-208ENST00000550974 GCC2Q8IWJ2 1684 aa18.08■□□□□ 0.48
GPN3-208ENST00000550974 TMEM131LA2VDJ0 1609 aa18.07■□□□□ 0.48
GPN3-208ENST00000550974 GLI3P10071 1580 aa18.06■□□□□ 0.48
GPN3-208ENST00000550974 ORAI2Q96SN7 254 aa18.06■□□□□ 0.48
GPN3-208ENST00000550974 EN1Q05925 392 aaPredicted RBP18.05■□□□□ 0.48
GPN3-208ENST00000550974 UNC5CLQ8IV45 518 aa18.05■□□□□ 0.48
GPN3-208ENST00000550974 C1orf167Q5SNV9 1468 aa18.05■□□□□ 0.48
GPN3-208ENST00000550974 BRWD3Q6RI45 1802 aa18.05■□□□□ 0.48
GPN3-208ENST00000550974 DCAF8L1A6NGE4 600 aa18.04■□□□□ 0.48
GPN3-208ENST00000550974 KRT27Q7Z3Y8 459 aa18.04■□□□□ 0.48
GPN3-208ENST00000550974 MYOM3Q5VTT5 1437 aa18.04■□□□□ 0.48
GPN3-208ENST00000550974 ADGRL3Q9HAR2 1447 aa18.04■□□□□ 0.48
GPN3-208ENST00000550974 MYOM2P54296 1465 aa18.03■□□□□ 0.48
GPN3-208ENST00000550974 COL22A1Q8NFW1 1626 aaPredicted RBP18.03■□□□□ 0.48
GPN3-208ENST00000550974 SPHKAPQ2M3C7 1700 aa18.02■□□□□ 0.48
GPN3-208ENST00000550974 LAMC1P11047 1609 aa18.01■□□□□ 0.47
GPN3-208ENST00000550974 XRN1Q8IZH2 1706 aaKnown RBP18.01■□□□□ 0.47
GPN3-208ENST00000550974 RPRD2Q5VT52 1461 aaKnown RBP17.98■□□□□ 0.47
GPN3-208ENST00000550974 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.98■□□□□ 0.47
GPN3-208ENST00000550974 ZNF784Q8NCA9 323 aaPredicted RBP17.97■□□□□ 0.47
GPN3-208ENST00000550974 CCDC9Q9Y3X0 531 aaKnown RBP17.97■□□□□ 0.47
GPN3-208ENST00000550974 NALCNQ8IZF0 1738 aa17.97■□□□□ 0.47
GPN3-208ENST00000550974 MARF1Q9Y4F3 1742 aaKnown RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms