RNA–Protein interactions for RNA: ENST00000550847.1

RAB3IP-214, Transcript of RAB3A interacting protein, humanhuman

TSL 3 BASIC

Gene RAB3IP, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-214ENST00000550847 IRF6O14896 467 aa10.3□□□□□ -0.76
RAB3IP-214ENST00000550847 APLP1P51693 650 aa10.3□□□□□ -0.76
RAB3IP-214ENST00000550847 ZMYND10O75800 440 aa10.29□□□□□ -0.76
RAB3IP-214ENST00000550847 NYAP1Q6ZVC0 841 aa10.29□□□□□ -0.76
RAB3IP-214ENST00000550847 SLF2Q8IX21 1173 aa10.29□□□□□ -0.76
RAB3IP-214ENST00000550847 CCDC102AQ96A19 550 aa10.29□□□□□ -0.76
RAB3IP-214ENST00000550847 HDGFP51858 240 aaKnown RBP10.28□□□□□ -0.76
RAB3IP-214ENST00000550847 SLC10A3P09131 477 aa10.27□□□□□ -0.77
RAB3IP-214ENST00000550847 BARGINQ6ZT62 677 aa10.26□□□□□ -0.77
RAB3IP-214ENST00000550847 MINK1Q8N4C8 1332 aaPredicted RBP10.26□□□□□ -0.77
RAB3IP-214ENST00000550847 ITGBL1O95965 494 aaPredicted RBP10.25□□□□□ -0.77
RAB3IP-214ENST00000550847 BCANQ96GW7 911 aa10.25□□□□□ -0.77
RAB3IP-214ENST00000550847 TJAP1Q5JTD0 557 aa10.23□□□□□ -0.77
RAB3IP-214ENST00000550847 DAXXQ9UER7 740 aaPredicted RBP10.22□□□□□ -0.77
RAB3IP-214ENST00000550847 CFHP08603 1231 aa10.21□□□□□ -0.77
RAB3IP-214ENST00000550847 MTRQ99707 1265 aa10.21□□□□□ -0.77
RAB3IP-214ENST00000550847 DDX11L8A8MPP1 907 aa10.19□□□□□ -0.78
RAB3IP-214ENST00000550847 MDM2Q00987 491 aaPredicted RBP10.19□□□□□ -0.78
RAB3IP-214ENST00000550847 IFFO2Q5TF58 517 aa10.19□□□□□ -0.78
RAB3IP-214ENST00000550847 SLC4A3P48751 1232 aa10.18□□□□□ -0.78
RAB3IP-214ENST00000550847 KRI1Q8N9T8 703 aaKnown RBP10.18□□□□□ -0.78
RAB3IP-214ENST00000550847 ZNF516Q92618 1163 aa10.18□□□□□ -0.78
RAB3IP-214ENST00000550847 REPIN1Q9BWE0 567 aaKnown RBP10.18□□□□□ -0.78
RAB3IP-214ENST00000550847 COPS2P61201 443 aa10.17□□□□□ -0.78
RAB3IP-214ENST00000550847 NECTIN2Q92692 538 aa10.17□□□□□ -0.78
RAB3IP-214ENST00000550847 ACTN4O43707 911 aaKnown RBP10.16□□□□□ -0.78
RAB3IP-214ENST00000550847 KCNC4Q03721 635 aa10.16□□□□□ -0.78
RAB3IP-214ENST00000550847 BLOC1S3Q6QNY0 202 aa10.16□□□□□ -0.78
RAB3IP-214ENST00000550847 TMUB1Q9BVT8 246 aa10.16□□□□□ -0.78
RAB3IP-214ENST00000550847 RDH13Q8NBN7 331 aa10.15□□□□□ -0.78
RAB3IP-214ENST00000550847 IL21Q9HBE4 155 aa10.14□□□□□ -0.79
RAB3IP-214ENST00000550847 PCDHB3Q9Y5E6 796 aa10.14□□□□□ -0.79
RAB3IP-214ENST00000550847 A0A0G2JS52 829 aa10.13□□□□□ -0.79
RAB3IP-214ENST00000550847 NKX2-3Q8TAU0 364 aa10.13□□□□□ -0.79
RAB3IP-214ENST00000550847 CD46P15529 392 aa10.12□□□□□ -0.79
RAB3IP-214ENST00000550847 GCGRP47871 477 aa10.12□□□□□ -0.79
RAB3IP-214ENST00000550847 KMT5BQ4FZB7 885 aa10.12□□□□□ -0.79
RAB3IP-214ENST00000550847 PRR14Q9BWN1 585 aa10.12□□□□□ -0.79
RAB3IP-214ENST00000550847 SLC24A3Q9HC58 644 aa10.12□□□□□ -0.79
RAB3IP-214ENST00000550847 AMHR2Q16671 573 aa10.11□□□□□ -0.79
RAB3IP-214ENST00000550847 PUS10Q3MIT2 529 aaKnown RBP10.11□□□□□ -0.79
RAB3IP-214ENST00000550847 SULF1Q8IWU6 871 aa10.11□□□□□ -0.79
RAB3IP-214ENST00000550847 GPCPD1Q9NPB8 672 aa10.11□□□□□ -0.79
RAB3IP-214ENST00000550847 FAM217BQ9NTX9 383 aaPredicted RBP10.11□□□□□ -0.79
RAB3IP-214ENST00000550847 TRIM66O15016 1216 aa10.1□□□□□ -0.79
RAB3IP-214ENST00000550847 TLL1O43897 1013 aa10.1□□□□□ -0.79
RAB3IP-214ENST00000550847 FUT2Q10981 343 aa10.1□□□□□ -0.79
RAB3IP-214ENST00000550847 ZPR1O75312 459 aa10.09□□□□□ -0.79
RAB3IP-214ENST00000550847 CLCN1P35523 988 aa10.09□□□□□ -0.79
RAB3IP-214ENST00000550847 AK7Q96M32 723 aa10.08□□□□□ -0.8
RAB3IP-214ENST00000550847 RSPH4AQ5TD94 716 aa10.07□□□□□ -0.8
RAB3IP-214ENST00000550847 PARP9Q8IXQ6 854 aa10.07□□□□□ -0.8
RAB3IP-214ENST00000550847 MORN1Q5T089 497 aa10.06□□□□□ -0.8
RAB3IP-214ENST00000550847 TTLL12Q14166 644 aaPredicted RBP10.05□□□□□ -0.8
RAB3IP-214ENST00000550847 GIGYF2Q6Y7W6 1299 aaKnown RBP10.05□□□□□ -0.8
RAB3IP-214ENST00000550847 HLA-CQ95604 372 aa10.04□□□□□ -0.8
RAB3IP-214ENST00000550847 SSTR3P32745 418 aaPredicted RBP10.03□□□□□ -0.8
RAB3IP-214ENST00000550847 SCUBE3Q8IX30 993 aa10.03□□□□□ -0.8
RAB3IP-214ENST00000550847 MS4A1P11836 297 aa10.02□□□□□ -0.81
RAB3IP-214ENST00000550847 ATP6V1AP38606 617 aa10.02□□□□□ -0.81
RAB3IP-214ENST00000550847 PPP1R18Q6NYC8 613 aa10.02□□□□□ -0.81
RAB3IP-214ENST00000550847 SLC27A5Q9Y2P5 690 aa10.02□□□□□ -0.81
RAB3IP-214ENST00000550847 KDM4AO75164 1064 aa10.01□□□□□ -0.81
RAB3IP-214ENST00000550847 NR1I2O75469 434 aa10.01□□□□□ -0.81
RAB3IP-214ENST00000550847 PDE4DQ08499 809 aa10.01□□□□□ -0.81
RAB3IP-214ENST00000550847 THAP11Q96EK4 314 aa10□□□□□ -0.81
RAB3IP-214ENST00000550847 GUCA2AQ02747 115 aa9.99□□□□□ -0.81
RAB3IP-214ENST00000550847 ADH1BP00325 375 aa9.98□□□□□ -0.81
RAB3IP-214ENST00000550847 RNF19BQ6ZMZ0 732 aa9.98□□□□□ -0.81
RAB3IP-214ENST00000550847 HOXA2O43364 376 aa9.97□□□□□ -0.81
RAB3IP-214ENST00000550847 S1PR4O95977 384 aa9.97□□□□□ -0.81
RAB3IP-214ENST00000550847 SPIRE2Q8WWL2 714 aa9.96□□□□□ -0.82
RAB3IP-214ENST00000550847 SPSB2Q99619 263 aa9.96□□□□□ -0.82
RAB3IP-214ENST00000550847 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.96□□□□□ -0.82
RAB3IP-214ENST00000550847 RNF223E7ERA6 249 aa9.95□□□□□ -0.82
RAB3IP-214ENST00000550847 BRICD5Q6PL45 260 aa9.95□□□□□ -0.82
RAB3IP-214ENST00000550847 FAM160A2Q8N612 972 aaPredicted RBP9.95□□□□□ -0.82
RAB3IP-214ENST00000550847 BEGAINQ9BUH8 593 aa9.95□□□□□ -0.82
RAB3IP-214ENST00000550847 PPEF1O14829 653 aaPredicted RBP9.94□□□□□ -0.82
RAB3IP-214ENST00000550847 EMID1Q96A84 441 aaPredicted RBP9.94□□□□□ -0.82
RAB3IP-214ENST00000550847 PRDM9Q9NQV7 894 aa9.94□□□□□ -0.82
RAB3IP-214ENST00000550847 USP46P62068 366 aa9.93□□□□□ -0.82
RAB3IP-214ENST00000550847 NUTM1Q86Y26 1132 aa9.92□□□□□ -0.82
RAB3IP-214ENST00000550847 GPBP1L1Q9HC44 474 aaPredicted RBP9.92□□□□□ -0.82
RAB3IP-214ENST00000550847 PCDHGC3Q9UN70 934 aa9.92□□□□□ -0.82
RAB3IP-214ENST00000550847 MOXD2PA6NHM9 499 aa9.91□□□□□ -0.82
RAB3IP-214ENST00000550847 RGS20O76081 388 aa9.91□□□□□ -0.82
RAB3IP-214ENST00000550847 FMNL1O95466 1100 aaPredicted RBP9.91□□□□□ -0.82
RAB3IP-214ENST00000550847 NDUFV2P19404 249 aa9.91□□□□□ -0.82
RAB3IP-214ENST00000550847 GRIPAP1Q4V328 841 aa9.91□□□□□ -0.82
RAB3IP-214ENST00000550847 SLC6A16Q9GZN6 736 aa9.91□□□□□ -0.82
RAB3IP-214ENST00000550847 SALL2Q9Y467 1007 aaPredicted RBP9.91□□□□□ -0.82
RAB3IP-214ENST00000550847 PLA2G2CQ5R387 149 aa9.9□□□□□ -0.82
RAB3IP-214ENST00000550847 SYMPKQ92797 1274 aaKnown RBP9.9□□□□□ -0.82
RAB3IP-214ENST00000550847 TPRNQ4KMQ1 711 aa9.89□□□□□ -0.83
RAB3IP-214ENST00000550847 TBC1D2Q9BYX2 928 aa9.89□□□□□ -0.83
RAB3IP-214ENST00000550847 GGCXP38435 758 aa9.88□□□□□ -0.83
RAB3IP-214ENST00000550847 PRKD2Q9BZL6 878 aa9.88□□□□□ -0.83
RAB3IP-214ENST00000550847 FDX1P10109 184 aa9.87□□□□□ -0.83
RAB3IP-214ENST00000550847 Q3C1V9 767 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms