RNA–Protein interactions for RNA: ENST00000550818.1

TSPAN8-205, Transcript of tetraspanin 8, humanhuman

TSL 1 (best)

Gene TSPAN8, Length 627 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-205ENST00000550818 ZNF598Q86UK7 904 aaKnown RBP9.4□□□□□ -0.9
TSPAN8-205ENST00000550818 TREML4Q6UXN2 200 aa9.39□□□□□ -0.91
TSPAN8-205ENST00000550818 LIAT1Q6ZQX7 453 aa9.37□□□□□ -0.91
TSPAN8-205ENST00000550818 NPDC1Q9NQX5 325 aaPredicted RBP9.37□□□□□ -0.91
TSPAN8-205ENST00000550818 PCDHB3Q9Y5E6 796 aa9.37□□□□□ -0.91
TSPAN8-205ENST00000550818 BLOC1S3Q6QNY0 202 aa9.36□□□□□ -0.91
TSPAN8-205ENST00000550818 PADI6Q6TGC4 694 aa9.36□□□□□ -0.91
TSPAN8-205ENST00000550818 EYA1Q99502 592 aa9.36□□□□□ -0.91
TSPAN8-205ENST00000550818 FAM187AA6NFU0 413 aa9.35□□□□□ -0.91
TSPAN8-205ENST00000550818 PPEF1O14829 653 aaPredicted RBP9.35□□□□□ -0.91
TSPAN8-205ENST00000550818 TLL1O43897 1013 aa9.35□□□□□ -0.91
TSPAN8-205ENST00000550818 GDF9O60383 454 aa9.35□□□□□ -0.91
TSPAN8-205ENST00000550818 ANKLE1Q8NAG6 615 aa9.35□□□□□ -0.91
TSPAN8-205ENST00000550818 ARIH1Q9Y4X5 557 aaPredicted RBP9.35□□□□□ -0.91
TSPAN8-205ENST00000550818 ST8SIA5O15466 376 aa9.34□□□□□ -0.91
TSPAN8-205ENST00000550818 ZNF697Q5TEC3 545 aa9.34□□□□□ -0.91
TSPAN8-205ENST00000550818 TNFRSF10AO00220 468 aa9.33□□□□□ -0.92
TSPAN8-205ENST00000550818 PRR14Q9BWN1 585 aa9.33□□□□□ -0.92
TSPAN8-205ENST00000550818 AAASQ9NRG9 546 aa9.33□□□□□ -0.92
TSPAN8-205ENST00000550818 S1PR4O95977 384 aa9.32□□□□□ -0.92
TSPAN8-205ENST00000550818 E2F4Q16254 413 aa9.31□□□□□ -0.92
TSPAN8-205ENST00000550818 BBXQ8WY36 941 aaPredicted RBP9.31□□□□□ -0.92
TSPAN8-205ENST00000550818 SLC4A3P48751 1232 aa9.3□□□□□ -0.92
TSPAN8-205ENST00000550818 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.28□□□□□ -0.92
TSPAN8-205ENST00000550818 PLA2G2CQ5R387 149 aa9.27□□□□□ -0.93
TSPAN8-205ENST00000550818 HAP1P54257 671 aaPredicted RBP9.26□□□□□ -0.93
TSPAN8-205ENST00000550818 ACTN4O43707 911 aaKnown RBP9.25□□□□□ -0.93
TSPAN8-205ENST00000550818 PKD2L1Q9P0L9 805 aa9.25□□□□□ -0.93
TSPAN8-205ENST00000550818 DACH1Q9UI36 760 aa9.25□□□□□ -0.93
TSPAN8-205ENST00000550818 CRIPAKQ8N1N5 446 aa9.23□□□□□ -0.93
TSPAN8-205ENST00000550818 ADH1BP00325 375 aa9.22□□□□□ -0.93
TSPAN8-205ENST00000550818 WFS1O76024 890 aa9.21□□□□□ -0.94
TSPAN8-205ENST00000550818 DNAJB2P25686 324 aa9.21□□□□□ -0.94
TSPAN8-205ENST00000550818 TMEM134Q9H6X4 195 aa9.21□□□□□ -0.94
TSPAN8-205ENST00000550818 PAXIP1Q6ZW49 1069 aaPredicted RBP9.2□□□□□ -0.94
TSPAN8-205ENST00000550818 CFHP08603 1231 aa9.19□□□□□ -0.94
TSPAN8-205ENST00000550818 FOXC1Q12948 553 aa9.19□□□□□ -0.94
TSPAN8-205ENST00000550818 KMT5BQ4FZB7 885 aa9.19□□□□□ -0.94
TSPAN8-205ENST00000550818 SLC6A16Q9GZN6 736 aa9.19□□□□□ -0.94
TSPAN8-205ENST00000550818 GMPR2Q9P2T1 348 aaKnown RBP9.19□□□□□ -0.94
TSPAN8-205ENST00000550818 STK17AQ9UEE5 414 aa9.19□□□□□ -0.94
TSPAN8-205ENST00000550818 AVPP01185 164 aa9.18□□□□□ -0.94
TSPAN8-205ENST00000550818 NFX1Q12986 1120 aaKnown RBP9.18□□□□□ -0.94
TSPAN8-205ENST00000550818 LMOD2Q6P5Q4 547 aa9.18□□□□□ -0.94
TSPAN8-205ENST00000550818 WIPF1O43516 503 aa9.17□□□□□ -0.94
TSPAN8-205ENST00000550818 NR1I2O75469 434 aa9.17□□□□□ -0.94
TSPAN8-205ENST00000550818 CFAP44Q96MT7 982 aa9.17□□□□□ -0.94
TSPAN8-205ENST00000550818 TOR4AQ9NXH8 423 aa9.17□□□□□ -0.94
TSPAN8-205ENST00000550818 C11orf95C9JLR9 678 aaPredicted RBP9.16□□□□□ -0.94
TSPAN8-205ENST00000550818 SLC10A3P09131 477 aa9.16□□□□□ -0.94
TSPAN8-205ENST00000550818 SPRYD3Q8NCJ5 442 aa9.16□□□□□ -0.94
TSPAN8-205ENST00000550818 ADGRG1Q9Y653 693 aa9.16□□□□□ -0.94
TSPAN8-205ENST00000550818 RCCD1A6NED2 376 aa9.15□□□□□ -0.94
TSPAN8-205ENST00000550818 SCUBE3Q8IX30 993 aa9.15□□□□□ -0.94
TSPAN8-205ENST00000550818 VSIG10Q8N0Z9 540 aa9.15□□□□□ -0.94
TSPAN8-205ENST00000550818 RBM46Q8TBY0 533 aaKnown RBP9.15□□□□□ -0.94
TSPAN8-205ENST00000550818 AXIN1O15169 862 aa9.14□□□□□ -0.95
TSPAN8-205ENST00000550818 LCE2CQ5TA81 110 aa9.14□□□□□ -0.95
TSPAN8-205ENST00000550818 WDR70Q9NW82 654 aa9.14□□□□□ -0.95
TSPAN8-205ENST00000550818 PTGDRQ13258 359 aa9.13□□□□□ -0.95
TSPAN8-205ENST00000550818 FAM161AQ3B820 660 aa9.12□□□□□ -0.95
TSPAN8-205ENST00000550818 RPIAP49247 311 aa9.11□□□□□ -0.95
TSPAN8-205ENST00000550818 SMCPP49901 116 aaPredicted RBP9.11□□□□□ -0.95
TSPAN8-205ENST00000550818 INSM1Q01101 510 aaPredicted RBP9.11□□□□□ -0.95
TSPAN8-205ENST00000550818 CTC1Q2NKJ3 1217 aa9.11□□□□□ -0.95
TSPAN8-205ENST00000550818 SPSB2Q99619 263 aa9.1□□□□□ -0.95
TSPAN8-205ENST00000550818 MLLT3P42568 568 aaPredicted RBP9.09□□□□□ -0.95
TSPAN8-205ENST00000550818 PUS10Q3MIT2 529 aaKnown RBP9.09□□□□□ -0.95
TSPAN8-205ENST00000550818 CYP4X1Q8N118 509 aa9.09□□□□□ -0.95
TSPAN8-205ENST00000550818 CD2BP2O95400 341 aaKnown RBP9.07□□□□□ -0.96
TSPAN8-205ENST00000550818 FCF1Q9Y324 198 aaKnown RBP9.06□□□□□ -0.96
TSPAN8-205ENST00000550818 SNRPBP14678 240 aaKnown RBP9.05□□□□□ -0.96
TSPAN8-205ENST00000550818 KDM2AQ9Y2K7 1162 aa9.05□□□□□ -0.96
TSPAN8-205ENST00000550818 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.04□□□□□ -0.96
TSPAN8-205ENST00000550818 TSHZ2Q9NRE2 1034 aa9.04□□□□□ -0.96
TSPAN8-205ENST00000550818 TERTO14746 1132 aaKnown RBP9.03□□□□□ -0.96
TSPAN8-205ENST00000550818 THAP11Q96EK4 314 aa9.03□□□□□ -0.96
TSPAN8-205ENST00000550818 ATP13A2Q9NQ11 1180 aa9.02□□□□□ -0.97
TSPAN8-205ENST00000550818 LOC100996750A0A140TA64 210 aa9.01□□□□□ -0.97
TSPAN8-205ENST00000550818 TTC24A2A3L6 582 aaPredicted RBP9.01□□□□□ -0.97
TSPAN8-205ENST00000550818 FAM160A2Q8N612 972 aaPredicted RBP9.01□□□□□ -0.97
TSPAN8-205ENST00000550818 KRTAP4-6Q9BYQ5 205 aa9.01□□□□□ -0.97
TSPAN8-205ENST00000550818 SMPD1P17405 629 aa9□□□□□ -0.97
TSPAN8-205ENST00000550818 MORN1Q5T089 497 aa9□□□□□ -0.97
TSPAN8-205ENST00000550818 TRIM47Q96LD4 638 aa9□□□□□ -0.97
TSPAN8-205ENST00000550818 PXYLP1Q8TE99 480 aa8.99□□□□□ -0.97
TSPAN8-205ENST00000550818 NUTM2FA1L443 756 aa8.97□□□□□ -0.97
TSPAN8-205ENST00000550818 BCANQ96GW7 911 aa8.97□□□□□ -0.97
TSPAN8-205ENST00000550818 PRDM9Q9NQV7 894 aa8.97□□□□□ -0.97
TSPAN8-205ENST00000550818 WNT7AO00755 349 aa8.96□□□□□ -0.98
TSPAN8-205ENST00000550818 SNIP1Q8TAD8 396 aaKnown RBP8.96□□□□□ -0.98
TSPAN8-205ENST00000550818 OATP04181 439 aa8.95□□□□□ -0.98
TSPAN8-205ENST00000550818 FUT2Q10981 343 aa8.95□□□□□ -0.98
TSPAN8-205ENST00000550818 RSPH4AQ5TD94 716 aa8.95□□□□□ -0.98
TSPAN8-205ENST00000550818 ARHGEF1Q92888 912 aaKnown RBP8.95□□□□□ -0.98
TSPAN8-205ENST00000550818 SENP2Q9HC62 589 aa8.95□□□□□ -0.98
TSPAN8-205ENST00000550818 SLC27A5Q9Y2P5 690 aa8.95□□□□□ -0.98
TSPAN8-205ENST00000550818 J3QL48 77 aa8.94□□□□□ -0.98
TSPAN8-205ENST00000550818 FCHSD2O94868 740 aa8.93□□□□□ -0.98
TSPAN8-205ENST00000550818 FMNL1O95466 1100 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms