RNA–Protein interactions for RNA: ENST00000550411.5

CBX5-204, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-204ENST00000550411 ARHGAP31Q2M1Z3 1444 aa10.69□□□□□ -0.7
CBX5-204ENST00000550411 PHLPP1O60346 1717 aa10.69□□□□□ -0.7
CBX5-204ENST00000550411 TET3O43151 1660 aa10.69□□□□□ -0.7
CBX5-204ENST00000550411 DCAF8L1A6NGE4 600 aa10.68□□□□□ -0.7
CBX5-204ENST00000550411 EFCAB6Q5THR3 1501 aa10.68□□□□□ -0.7
CBX5-204ENST00000550411 LMTK2Q8IWU2 1503 aa10.67□□□□□ -0.7
CBX5-204ENST00000550411 E9PCH4 1651 aa10.66□□□□□ -0.7
CBX5-204ENST00000550411 UNC13BO14795 1591 aa10.65□□□□□ -0.7
CBX5-204ENST00000550411 NWD1Q149M9 1564 aa10.65□□□□□ -0.7
CBX5-204ENST00000550411 ADGRB3O60242 1522 aa10.65□□□□□ -0.7
CBX5-204ENST00000550411 KANK1Q14678 1352 aa10.65□□□□□ -0.71
CBX5-204ENST00000550411 LTKP29376 864 aa10.64□□□□□ -0.71
CBX5-204ENST00000550411 TXNDC2Q86VQ3 553 aa10.64□□□□□ -0.71
CBX5-204ENST00000550411 PPARGC1BQ86YN6 1023 aaKnown RBP10.64□□□□□ -0.71
CBX5-204ENST00000550411 RRP7BPQ9NSQ0 103 aa10.64□□□□□ -0.71
CBX5-204ENST00000550411 ANKRD30AQ9BXX3 1397 aa10.64□□□□□ -0.71
CBX5-204ENST00000550411 KIF1BO60333 1816 aa10.63□□□□□ -0.71
CBX5-204ENST00000550411 TMEM131LA2VDJ0 1609 aa10.63□□□□□ -0.71
CBX5-204ENST00000550411 FAM50AQ14320 339 aaKnown RBP10.63□□□□□ -0.71
CBX5-204ENST00000550411 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.63□□□□□ -0.718e-7■■□□□ 12.5
CBX5-204ENST00000550411 CHIC2Q9UKJ5 165 aa10.63□□□□□ -0.71
CBX5-204ENST00000550411 ATF5Q9Y2D1 282 aaPredicted RBP10.63□□□□□ -0.71
CBX5-204ENST00000550411 EID1Q9Y6B2 187 aa10.63□□□□□ -0.71
CBX5-204ENST00000550411 RRBP1Q9P2E9 1410 aaKnown RBP10.63□□□□□ -0.71
CBX5-204ENST00000550411 SPHKAPQ2M3C7 1700 aa10.62□□□□□ -0.71
CBX5-204ENST00000550411 STAG3Q9UJ98 1225 aa10.62□□□□□ -0.71
CBX5-204ENST00000550411 TMEM2Q9UHN6 1383 aa10.62□□□□□ -0.71
CBX5-204ENST00000550411 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.61□□□□□ -0.71
CBX5-204ENST00000550411 ROCK1Q13464 1354 aa10.61□□□□□ -0.71
CBX5-204ENST00000550411 ANKRD50Q9ULJ7 1429 aa10.6□□□□□ -0.71
CBX5-204ENST00000550411 IQGAP3Q86VI3 1631 aa10.6□□□□□ -0.71
CBX5-204ENST00000550411 NOS1P29475 1434 aa10.59□□□□□ -0.71
CBX5-204ENST00000550411 SHPRHQ149N8 1683 aa10.58□□□□□ -0.72
CBX5-204ENST00000550411 NKTRP30414 1462 aaKnown RBP10.58□□□□□ -0.72
CBX5-204ENST00000550411 RPRD2Q5VT52 1461 aaKnown RBP10.58□□□□□ -0.72
CBX5-204ENST00000550411 IDI1Q13907 227 aa10.58□□□□□ -0.72
CBX5-204ENST00000550411 FAM135BQ49AJ0 1406 aa10.57□□□□□ -0.72
CBX5-204ENST00000550411 TMEM94Q12767 1356 aa10.56□□□□□ -0.72
CBX5-204ENST00000550411 COL16A1Q07092 1604 aaPredicted RBP10.56□□□□□ -0.72
CBX5-204ENST00000550411 KCNA6P17658 529 aa10.55□□□□□ -0.72
CBX5-204ENST00000550411 DIP2AQ14689 1571 aa10.55□□□□□ -0.72
CBX5-204ENST00000550411 PROSER2Q86WR7 435 aaPredicted RBP10.54□□□□□ -0.72
CBX5-204ENST00000550411 SLC26A8Q96RN1 970 aa10.54□□□□□ -0.72
CBX5-204ENST00000550411 ZFYVE9O95405 1425 aa10.53□□□□□ -0.72
CBX5-204ENST00000550411 NAIPQ13075 1403 aa10.53□□□□□ -0.72
CBX5-204ENST00000550411 SLC52A1Q9NWF4 448 aa10.53□□□□□ -0.72
CBX5-204ENST00000550411 RGS17Q9UGC6 210 aaPredicted RBP10.53□□□□□ -0.72
CBX5-204ENST00000550411 NALCNQ8IZF0 1738 aa10.53□□□□□ -0.72
CBX5-204ENST00000550411 NHSL1Q5SYE7 1610 aa10.52□□□□□ -0.73
CBX5-204ENST00000550411 NRXN3Q9Y4C0 1643 aa10.52□□□□□ -0.73
CBX5-204ENST00000550411 BCANQ96GW7 911 aa10.52□□□□□ -0.73
CBX5-204ENST00000550411 MSH6P52701 1360 aa10.52□□□□□ -0.73
CBX5-204ENST00000550411 PLEKHG1Q9ULL1 1385 aa10.52□□□□□ -0.73
CBX5-204ENST00000550411 RIMS2Q9UQ26 1411 aa10.51□□□□□ -0.73
CBX5-204ENST00000550411 XRN1Q8IZH2 1706 aaKnown RBP10.51□□□□□ -0.73
CBX5-204ENST00000550411 ITGAEP38570 1179 aa10.51□□□□□ -0.73
CBX5-204ENST00000550411 RBM33Q96EV2 1170 aaKnown RBP10.51□□□□□ -0.73
CBX5-204ENST00000550411 TRPM2O94759 1503 aa10.51□□□□□ -0.73
CBX5-204ENST00000550411 MARF1Q9Y4F3 1742 aaKnown RBP10.5□□□□□ -0.73
CBX5-204ENST00000550411 AHDC1Q5TGY3 1603 aaPredicted RBP10.5□□□□□ -0.73
CBX5-204ENST00000550411 HFM1A2PYH4 1435 aa10.5□□□□□ -0.73
CBX5-204ENST00000550411 HDGFP51858 240 aaKnown RBP10.49□□□□□ -0.73
CBX5-204ENST00000550411 PPLO60437 1756 aa10.49□□□□□ -0.73
CBX5-204ENST00000550411 PPP1R15AO75807 674 aaPredicted RBP10.48□□□□□ -0.73
CBX5-204ENST00000550411 NCOA3Q9Y6Q9 1424 aa10.47□□□□□ -0.73
CBX5-204ENST00000550411 CHGAP10645 457 aaKnown RBP10.46□□□□□ -0.73
CBX5-204ENST00000550411 POTEAQ6S8J7 498 aa10.46□□□□□ -0.73
CBX5-204ENST00000550411 SLAIN2Q9P270 581 aa10.46□□□□□ -0.73
CBX5-204ENST00000550411 JCADQ9P266 1359 aa10.46□□□□□ -0.74
CBX5-204ENST00000550411 ADAMTS13Q76LX8 1427 aa10.46□□□□□ -0.74
CBX5-204ENST00000550411 CLTCL1P53675 1640 aa10.46□□□□□ -0.74
CBX5-204ENST00000550411 RGPD8O14715 1765 aaPredicted RBP10.45□□□□□ -0.74
CBX5-204ENST00000550411 SETBP1Q9Y6X0 1596 aa10.45□□□□□ -0.74
CBX5-204ENST00000550411 NUP155O75694 1391 aa10.45□□□□□ -0.74
CBX5-204ENST00000550411 SAMD1Q6SPF0 538 aaPredicted RBP10.45□□□□□ -0.74
CBX5-204ENST00000550411 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.45□□□□□ -0.74
CBX5-204ENST00000550411 TBX22Q9Y458 520 aa10.45□□□□□ -0.74
CBX5-204ENST00000550411 PIK3R4Q99570 1358 aa10.44□□□□□ -0.74
CBX5-204ENST00000550411 U3KPZ7 1027 aaPredicted RBP10.44□□□□□ -0.74
CBX5-204ENST00000550411 LRP6O75581 1613 aa10.44□□□□□ -0.74
CBX5-204ENST00000550411 NUTM2DQ5VT03 806 aaPredicted RBP10.43□□□□□ -0.74
CBX5-204ENST00000550411 IFT172Q9UG01 1749 aa10.42□□□□□ -0.74
CBX5-204ENST00000550411 C14orf37Q86TY3 774 aa10.42□□□□□ -0.74
CBX5-204ENST00000550411 LAMC1P11047 1609 aa10.42□□□□□ -0.74
CBX5-204ENST00000550411 NEXMIFQ5QGS0 1516 aa10.42□□□□□ -0.74
CBX5-204ENST00000550411 PTPRUQ92729 1446 aa10.41□□□□□ -0.74
CBX5-204ENST00000550411 SPATA31A6Q5VVP1 1343 aa10.4□□□□□ -0.74
CBX5-204ENST00000550411 ASXL1Q8IXJ9 1541 aa10.4□□□□□ -0.74
CBX5-204ENST00000550411 ATF3P18847 181 aa10.4□□□□□ -0.74
CBX5-204ENST00000550411 CADPS2Q86UW7 1296 aa10.4□□□□□ -0.74
CBX5-204ENST00000550411 C19orf44Q9H6X5 657 aa10.4□□□□□ -0.74
CBX5-204ENST00000550411 DCCP43146 1447 aa10.4□□□□□ -0.75
CBX5-204ENST00000550411 CACNB1Q02641 598 aaPredicted RBP10.39□□□□□ -0.75
CBX5-204ENST00000550411 AMOTL2Q9Y2J4 779 aa10.39□□□□□ -0.75
CBX5-204ENST00000550411 MEX3CQ5U5Q3 659 aaKnown RBP10.38□□□□□ -0.75
CBX5-204ENST00000550411 BRWD3Q6RI45 1802 aa10.37□□□□□ -0.75
CBX5-204ENST00000550411 KNDC1Q76NI1 1749 aa10.36□□□□□ -0.75
CBX5-204ENST00000550411 MST1RQ04912 1400 aa10.36□□□□□ -0.75
CBX5-204ENST00000550411 ZNF772Q68DY9 489 aaPredicted RBP10.36□□□□□ -0.75
CBX5-204ENST00000550411 COL22A1Q8NFW1 1626 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms