RNA–Protein interactions for RNA: ENST00000550167.5

NTM-222, Transcript of neurotrimin, human

TSL 5

Gene NTM, Length 644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NTM-222	ENST00000550167	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	18.63	■□□□□ 0.57
NTM-222	ENST00000550167	TET3	O43151	1660 aa		18.62	■□□□□ 0.57
NTM-222	ENST00000550167	KANK1	Q14678	1352 aa		18.61	■□□□□ 0.57
NTM-222	ENST00000550167	NOS1	P29475	1434 aa		18.6	■□□□□ 0.57
NTM-222	ENST00000550167	IDI1	Q13907	227 aa		18.6	■□□□□ 0.57
NTM-222	ENST00000550167	NWD1	Q149M9	1564 aa		18.59	■□□□□ 0.57
NTM-222	ENST00000550167	ADGRB3	O60242	1522 aa		18.59	■□□□□ 0.57
NTM-222	ENST00000550167	RAB3GAP2	Q9H2M9	1393 aa		18.58	■□□□□ 0.57
NTM-222	ENST00000550167	KCNA6	P17658	529 aa		18.58	■□□□□ 0.56
NTM-222	ENST00000550167	STAG3	Q9UJ98	1225 aa		18.58	■□□□□ 0.56
NTM-222	ENST00000550167	NKTR	P30414	1462 aa	Known RBP	18.58	■□□□□ 0.56
NTM-222	ENST00000550167	ROBO1	Q9Y6N7	1651 aa		18.57	■□□□□ 0.56
NTM-222	ENST00000550167	SLC26A8	Q96RN1	970 aa		18.56	■□□□□ 0.56
NTM-222	ENST00000550167	RBM33	Q96EV2	1170 aa	Known RBP	18.55	■□□□□ 0.56
NTM-222	ENST00000550167	POTEA	Q6S8J7	498 aa		18.54	■□□□□ 0.56
NTM-222	ENST00000550167	PROSER2	Q86WR7	435 aa	Predicted RBP	18.53	■□□□□ 0.56
NTM-222	ENST00000550167	ZFYVE9	O95405	1425 aa		18.52	■□□□□ 0.56
NTM-222	ENST00000550167		E9PCH4	1651 aa		18.51	■□□□□ 0.55
NTM-222	ENST00000550167	PCGF6	Q9BYE7	350 aa		18.51	■□□□□ 0.55
NTM-222	ENST00000550167	SLC52A1	Q9NWF4	448 aa		18.5	■□□□□ 0.55
NTM-222	ENST00000550167	MSH6	P52701	1360 aa		18.49	■□□□□ 0.55
NTM-222	ENST00000550167	RPRD2	Q5VT52	1461 aa	Known RBP	18.49	■□□□□ 0.55
NTM-222	ENST00000550167	NUP155	O75694	1391 aa		18.47	■□□□□ 0.55
NTM-222	ENST00000550167	PLEKHG1	Q9ULL1	1385 aa		18.47	■□□□□ 0.55
NTM-222	ENST00000550167	SPHKAP	Q2M3C7	1700 aa		18.46	■□□□□ 0.55
NTM-222	ENST00000550167	RIMS2	Q9UQ26	1411 aa		18.44	■□□□□ 0.54
NTM-222	ENST00000550167	SLAIN2	Q9P270	581 aa		18.44	■□□□□ 0.54
NTM-222	ENST00000550167	JCAD	Q9P266	1359 aa		18.43	■□□□□ 0.54
NTM-222	ENST00000550167	TMEM131L	A2VDJ0	1609 aa		18.43	■□□□□ 0.54
NTM-222	ENST00000550167	COL16A1	Q07092	1604 aa	Predicted RBP	18.43	■□□□□ 0.54
NTM-222	ENST00000550167	PHLPP1	O60346	1717 aa		18.43	■□□□□ 0.54
NTM-222	ENST00000550167	BCAN	Q96GW7	911 aa		18.42	■□□□□ 0.54
NTM-222	ENST00000550167	SETD1A	O15047	1707 aa	Known RBP	18.41	■□□□□ 0.54
NTM-222	ENST00000550167	CHD2	O14647	1828 aa	Known RBP	18.41	■□□□□ 0.54
NTM-222	ENST00000550167	LRP6	O75581	1613 aa		18.4	■□□□□ 0.54
NTM-222	ENST00000550167	ADAMTS13	Q76LX8	1427 aa		18.4	■□□□□ 0.54
NTM-222	ENST00000550167	NCOA3	Q9Y6Q9	1424 aa		18.4	■□□□□ 0.54
NTM-222	ENST00000550167	MYO5B	Q9ULV0	1848 aa		18.39	■□□□□ 0.53
NTM-222	ENST00000550167	PPP1R15A	O75807	674 aa	Predicted RBP	18.38	■□□□□ 0.53
NTM-222	ENST00000550167	TBX22	Q9Y458	520 aa		18.38	■□□□□ 0.53
NTM-222	ENST00000550167	TRIM52	Q96A61	297 aa		18.37	■□□□□ 0.53
NTM-222	ENST00000550167	DIP2A	Q14689	1571 aa		18.36	■□□□□ 0.53
NTM-222	ENST00000550167	AHDC1	Q5TGY3	1603 aa	Predicted RBP	18.36	■□□□□ 0.53
NTM-222	ENST00000550167	MPHOSPH9	Q99550	1183 aa		18.36	■□□□□ 0.53
NTM-222	ENST00000550167	TRPM2	O94759	1503 aa		18.35	■□□□□ 0.53
NTM-222	ENST00000550167	DHX57	Q6P158	1386 aa	Known RBP	18.34	■□□□□ 0.53
NTM-222	ENST00000550167	PIK3R4	Q99570	1358 aa		18.34	■□□□□ 0.53
NTM-222	ENST00000550167	HDGF	P51858	240 aa	Known RBP	18.34	■□□□□ 0.53
NTM-222	ENST00000550167	SLC4A1AP	Q9BWU0	796 aa	Known RBP	18.34	■□□□□ 0.53
NTM-222	ENST00000550167	KIF1B	O60333	1816 aa		18.33	■□□□□ 0.53
NTM-222	ENST00000550167	SPATA31A6	Q5VVP1	1343 aa		18.33	■□□□□ 0.53
NTM-222	ENST00000550167	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	18.33	■□□□□ 0.52
NTM-222	ENST00000550167	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	18.32	■□□□□ 0.52
NTM-222	ENST00000550167	NUTM2D	Q5VT03	806 aa	Predicted RBP	18.31	■□□□□ 0.52
NTM-222	ENST00000550167	SHPRH	Q149N8	1683 aa		18.31	■□□□□ 0.52
NTM-222	ENST00000550167	PTPRU	Q92729	1446 aa		18.31	■□□□□ 0.52
NTM-222	ENST00000550167	CHGA	P10645	457 aa	Known RBP	18.3	■□□□□ 0.52
NTM-222	ENST00000550167	CADPS2	Q86UW7	1296 aa		18.3	■□□□□ 0.52
NTM-222	ENST00000550167	C19orf44	Q9H6X5	657 aa		18.3	■□□□□ 0.52
NTM-222	ENST00000550167	C14orf37	Q86TY3	774 aa		18.29	■□□□□ 0.52
NTM-222	ENST00000550167	CLTCL1	P53675	1640 aa		18.28	■□□□□ 0.52
NTM-222	ENST00000550167	ANKRD30B	Q9BXX2	1392 aa		18.28	■□□□□ 0.52
NTM-222	ENST00000550167	ATF3	P18847	181 aa		18.27	■□□□□ 0.52
NTM-222	ENST00000550167	DCC	P43146	1447 aa		18.26	■□□□□ 0.51
NTM-222	ENST00000550167	MEX3C	Q5U5Q3	659 aa	Known RBP	18.26	■□□□□ 0.51
NTM-222	ENST00000550167	ZNF772	Q68DY9	489 aa	Predicted RBP	18.26	■□□□□ 0.51
NTM-222	ENST00000550167	BRINP3	Q76B58	766 aa		18.26	■□□□□ 0.51
NTM-222	ENST00000550167	SRCAP	Q6ZRS2	3230 aa		18.25	■□□□□ 0.51
NTM-222	ENST00000550167	NRXN3	Q9Y4C0	1643 aa		18.25	■□□□□ 0.51
NTM-222	ENST00000550167	AMOTL2	Q9Y2J4	779 aa		18.25	■□□□□ 0.51
NTM-222	ENST00000550167	XRN1	Q8IZH2	1706 aa	Known RBP	18.25	■□□□□ 0.51
NTM-222	ENST00000550167	CLSPN	Q9HAW4	1339 aa		18.24	■□□□□ 0.51
NTM-222	ENST00000550167	ASXL1	Q8IXJ9	1541 aa		18.24	■□□□□ 0.51
NTM-222	ENST00000550167	UPF1	Q92900	1129 aa	Known RBP eCLIP	18.24	■□□□□ 0.51
NTM-222	ENST00000550167	SETBP1	Q9Y6X0	1596 aa		18.24	■□□□□ 0.51
NTM-222	ENST00000550167	MST1R	Q04912	1400 aa		18.22	■□□□□ 0.51
NTM-222	ENST00000550167	IFT172	Q9UG01	1749 aa		18.2	■□□□□ 0.5
NTM-222	ENST00000550167	CDK12	Q9NYV4	1490 aa	Predicted RBP	18.2	■□□□□ 0.5
NTM-222	ENST00000550167	CCDC144A	A2RUR9	1427 aa		18.19	■□□□□ 0.5
NTM-222	ENST00000550167	NHSL1	Q5SYE7	1610 aa		18.19	■□□□□ 0.5
NTM-222	ENST00000550167	FOXD1	Q16676	465 aa		18.18	■□□□□ 0.5
NTM-222	ENST00000550167	MET	P08581	1390 aa		18.17	■□□□□ 0.5
NTM-222	ENST00000550167	NUTM2B	A6NNL0	878 aa	Predicted RBP	18.17	■□□□□ 0.5
NTM-222	ENST00000550167	NUTM2E	B1AL46	878 aa	Predicted RBP	18.17	■□□□□ 0.5
NTM-222	ENST00000550167	RXRB	P28702	533 aa		18.17	■□□□□ 0.5
NTM-222	ENST00000550167	NUTM2A	Q8IVF1	878 aa	Predicted RBP	18.17	■□□□□ 0.5
NTM-222	ENST00000550167	PPL	O60437	1756 aa		18.17	■□□□□ 0.5
NTM-222	ENST00000550167	AFF2	P51816	1311 aa		18.16	■□□□□ 0.5
NTM-222	ENST00000550167	ADGRL3	Q9HAR2	1447 aa		18.15	■□□□□ 0.5
NTM-222	ENST00000550167	SPATA31E1	Q6ZUB1	1445 aa		18.15	■□□□□ 0.5
NTM-222	ENST00000550167	PNPLA6	Q8IY17	1366 aa		18.13	■□□□□ 0.49
NTM-222	ENST00000550167	RGS12	O14924	1447 aa		18.13	■□□□□ 0.49
NTM-222	ENST00000550167	NEXMIF	Q5QGS0	1516 aa		18.13	■□□□□ 0.49
NTM-222	ENST00000550167	DDX17	Q92841	729 aa	Known RBP	18.12	■□□□□ 0.49
NTM-222	ENST00000550167	NALCN	Q8IZF0	1738 aa		18.12	■□□□□ 0.49
NTM-222	ENST00000550167	LRRC59	Q96AG4	307 aa	Known RBP	18.1	■□□□□ 0.49
NTM-222	ENST00000550167	ZNF326	Q5BKZ1	582 aa	Known RBP	18.09	■□□□□ 0.49
NTM-222	ENST00000550167	C8orf37	Q96NL8	207 aa		18.08	■□□□□ 0.48
NTM-222	ENST00000550167	C1orf167	Q5SNV9	1468 aa		18.07	■□□□□ 0.48
NTM-222	ENST00000550167	PTCH1	Q13635	1447 aa		18.07	■□□□□ 0.48

Retrieved 100 of 20,778 RNA–protein pairs in 129 ms