RNA–Protein interactions for RNA: ENST00000549621.5

RITA1-202, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RITA1, Length 2,041 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-202ENST00000549621 SCAF11Q99590 1463 aaKnown RBP29.98■■■□□ 2.39
RITA1-202ENST00000549621 DISP3Q9P2K9 1392 aa29.98■■■□□ 2.39
RITA1-202ENST00000549621 ADGRF5Q8IZF2 1346 aa29.97■■■□□ 2.39
RITA1-202ENST00000549621 CCDC184Q52MB2 194 aa29.96■■■□□ 2.39
RITA1-202ENST00000549621 AGLP35573 1532 aa29.96■■■□□ 2.39
RITA1-202ENST00000549621 PREX1Q8TCU6 1659 aa29.93■■■□□ 2.38
RITA1-202ENST00000549621 ARHGEF40Q8TER5 1519 aa29.93■■■□□ 2.38
RITA1-202ENST00000549621 CHGAP10645 457 aaKnown RBP29.9■■■□□ 2.38
RITA1-202ENST00000549621 TMF1P82094 1093 aa29.88■■■□□ 2.37
RITA1-202ENST00000549621 CFAP70Q5T0N1 1121 aa29.88■■■□□ 2.37
RITA1-202ENST00000549621 PIK3C2GO75747 1445 aa29.86■■■□□ 2.37
RITA1-202ENST00000549621 SETBP1Q9Y6X0 1596 aa29.85■■■□□ 2.37
RITA1-202ENST00000549621 MRS2Q9HD23 443 aa29.85■■■□□ 2.37
RITA1-202ENST00000549621 NEXMIFQ5QGS0 1516 aa29.84■■■□□ 2.37
RITA1-202ENST00000549621 EIF3AQ14152 1382 aaKnown RBP29.84■■■□□ 2.37
RITA1-202ENST00000549621 RPGRIP1LQ68CZ1 1315 aa29.84■■■□□ 2.37
RITA1-202ENST00000549621 CLTCQ00610 1675 aaKnown RBP29.81■■■□□ 2.36
RITA1-202ENST00000549621 MYO3AQ8NEV4 1616 aa29.8■■■□□ 2.36
RITA1-202ENST00000549621 ERVK-7P63135 1459 aa29.79■■■□□ 2.36
RITA1-202ENST00000549621 MYO5BQ9ULV0 1848 aa29.78■■■□□ 2.36
RITA1-202ENST00000549621 CNGB1Q14028 1251 aaPredicted RBP29.78■■■□□ 2.36
RITA1-202ENST00000549621 TMEM131LA2VDJ0 1609 aa29.77■■■□□ 2.36
RITA1-202ENST00000549621 IDI1Q13907 227 aa29.77■■■□□ 2.36
RITA1-202ENST00000549621 ADGRB1O14514 1584 aa29.77■■■□□ 2.36
RITA1-202ENST00000549621 KTN1Q86UP2 1357 aaKnown RBP29.76■■■□□ 2.36
RITA1-202ENST00000549621 SLC52A1Q9NWF4 448 aa29.76■■■□□ 2.36
RITA1-202ENST00000549621 PPP6R1Q9UPN7 881 aa29.76■■■□□ 2.36
RITA1-202ENST00000549621 HNRNPUQ00839 825 aaKnown RBP eCLIP29.75■■■□□ 2.35
RITA1-202ENST00000549621 PER1O15534 1290 aaPredicted RBP29.74■■■□□ 2.35
RITA1-202ENST00000549621 MYOM1P52179 1685 aa29.73■■■□□ 2.35
RITA1-202ENST00000549621 C14orf93Q9H972 538 aaKnown RBP29.72■■■□□ 2.35
RITA1-202ENST00000549621 KDM5AP29375 1690 aaKnown RBP29.71■■■□□ 2.35
RITA1-202ENST00000549621 FAM9BQ8IZU0 186 aa29.71■■■□□ 2.35
RITA1-202ENST00000549621 PARD3Q8TEW0 1356 aa29.69■■■□□ 2.34
RITA1-202ENST00000549621 RALBP1Q15311 655 aa29.69■■■□□ 2.34
RITA1-202ENST00000549621 FBXO31Q5XUX0 539 aaPredicted RBP29.69■■■□□ 2.34
RITA1-202ENST00000549621 SPATA31D1Q6ZQQ2 1576 aa29.69■■■□□ 2.34
RITA1-202ENST00000549621 PANK3Q9H999 370 aa29.69■■■□□ 2.34
RITA1-202ENST00000549621 ZFYVE9O95405 1425 aa29.68■■■□□ 2.34
RITA1-202ENST00000549621 MYBBP1AQ9BQG0 1328 aaKnown RBP29.68■■■□□ 2.34
RITA1-202ENST00000549621 CDCA8Q53HL2 280 aa29.67■■■□□ 2.34
RITA1-202ENST00000549621 VGFO15240 615 aaPredicted RBP29.66■■■□□ 2.34
RITA1-202ENST00000549621 SBNO2Q9Y2G9 1366 aa29.65■■■□□ 2.34
RITA1-202ENST00000549621 QRICH2Q9H0J4 1663 aa29.64■■■□□ 2.34
RITA1-202ENST00000549621 NUTM2DQ5VT03 806 aaPredicted RBP29.63■■■□□ 2.33
RITA1-202ENST00000549621 BRD4O60885 1362 aaPredicted RBP29.63■■■□□ 2.33
RITA1-202ENST00000549621 MLECQ14165 292 aa29.62■■■□□ 2.33
RITA1-202ENST00000549621 ARHGEF28Q8N1W1 1705 aaKnown RBP29.59■■■□□ 2.33
RITA1-202ENST00000549621 SLC24A1O60721 1099 aa29.59■■■□□ 2.33
RITA1-202ENST00000549621 CENPJQ9HC77 1338 aaPredicted RBP29.59■■■□□ 2.33
RITA1-202ENST00000549621 TMEM132EQ6IEE7 984 aa29.58■■■□□ 2.33
RITA1-202ENST00000549621 ASXL1Q8IXJ9 1541 aa29.58■■■□□ 2.33
RITA1-202ENST00000549621 TRAK1Q9UPV9 953 aa29.57■■■□□ 2.32
RITA1-202ENST00000549621 TMC1Q8TDI8 760 aa29.56■■■□□ 2.32
RITA1-202ENST00000549621 PNISRQ8TF01 805 aaKnown RBP29.55■■■□□ 2.32
RITA1-202ENST00000549621 ZBED9Q6R2W3 1325 aa29.54■■■□□ 2.32
RITA1-202ENST00000549621 CC2D1BQ5T0F9 858 aaKnown RBP29.53■■■□□ 2.32
RITA1-202ENST00000549621 A2ML1A8K2U0 1454 aa29.53■■■□□ 2.32
RITA1-202ENST00000549621 NLRP13Q86W25 1043 aa29.52■■■□□ 2.32
RITA1-202ENST00000549621 SUPT16HQ9Y5B9 1047 aaKnown RBP29.52■■■□□ 2.32
RITA1-202ENST00000549621 LRPPRCP42704 1394 aaKnown RBP29.51■■■□□ 2.32
RITA1-202ENST00000549621 ZMYM3Q14202 1370 aa29.49■■■□□ 2.31
RITA1-202ENST00000549621 KNSTRNQ9Y448 316 aa29.47■■■□□ 2.31
RITA1-202ENST00000549621 AMER1Q5JTC6 1135 aaPredicted RBP29.46■■■□□ 2.31
RITA1-202ENST00000549621 ALKQ9UM73 1620 aa29.45■■■□□ 2.31
RITA1-202ENST00000549621 STAG3Q9UJ98 1225 aa29.45■■■□□ 2.3
RITA1-202ENST00000549621 ESF1Q9H501 851 aaKnown RBP29.44■■■□□ 2.3
RITA1-202ENST00000549621 NPC1L1Q9UHC9 1359 aa29.43■■■□□ 2.3
RITA1-202ENST00000549621 TULP4Q9NRJ4 1543 aa29.43■■■□□ 2.3
RITA1-202ENST00000549621 RIMS2Q9UQ26 1411 aa29.41■■■□□ 2.3
RITA1-202ENST00000549621 PTPRMP28827 1452 aa29.4■■■□□ 2.3
RITA1-202ENST00000549621 SETD1AO15047 1707 aaKnown RBP29.39■■■□□ 2.3
RITA1-202ENST00000549621 SENP3Q9H4L4 574 aaPredicted RBP29.38■■■□□ 2.29
RITA1-202ENST00000549621 YTHDC2Q9H6S0 1430 aaKnown RBP29.37■■■□□ 2.29
RITA1-202ENST00000549621 TNRQ92752 1358 aa29.36■■■□□ 2.29
RITA1-202ENST00000549621 CARD14Q9BXL6 1004 aa29.34■■■□□ 2.29
RITA1-202ENST00000549621 NRXN3Q9Y4C0 1643 aa29.33■■■□□ 2.29
RITA1-202ENST00000549621 FKBP8Q14318 412 aa29.33■■■□□ 2.29
RITA1-202ENST00000549621 STK26Q9P289 416 aa29.32■■■□□ 2.28
RITA1-202ENST00000549621 EVC2Q86UK5 1308 aa29.31■■■□□ 2.28
RITA1-202ENST00000549621 UBR1Q8IWV7 1749 aa29.31■■■□□ 2.28
RITA1-202ENST00000549621 PPP2R1AP30153 589 aa29.31■■■□□ 2.28
RITA1-202ENST00000549621 PUS7Q96PZ0 661 aaKnown RBP29.3■■■□□ 2.28
RITA1-202ENST00000549621 NEFLP07196 543 aa29.29■■■□□ 2.28
RITA1-202ENST00000549621 INSRP06213 1382 aa29.28■■■□□ 2.28
RITA1-202ENST00000549621 TRHP20396 242 aaPredicted RBP29.28■■■□□ 2.28
RITA1-202ENST00000549621 USP32Q8NFA0 1604 aa29.28■■■□□ 2.28
RITA1-202ENST00000549621 BLMP54132 1417 aaPredicted RBP29.26■■■□□ 2.27
RITA1-202ENST00000549621 SLC12A5Q9H2X9 1139 aa29.26■■■□□ 2.27
RITA1-202ENST00000549621 DLC1Q96QB1 1528 aa29.26■■■□□ 2.27
RITA1-202ENST00000549621 SMG6Q86US8 1419 aaKnown RBP29.25■■■□□ 2.27
RITA1-202ENST00000549621 NSD3Q9BZ95 1437 aa29.25■■■□□ 2.27
RITA1-202ENST00000549621 SAFB2Q14151 953 aaKnown RBP eCLIP29.25■■■□□ 2.27
RITA1-202ENST00000549621 C3P01024 1663 aa29.25■■■□□ 2.27
RITA1-202ENST00000549621 FER1L4A9Z1Z3 1794 aa29.24■■■□□ 2.27
RITA1-202ENST00000549621 PRAM1Q96QH2 718 aa29.23■■■□□ 2.27
RITA1-202ENST00000549621 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.23■■■□□ 2.27
RITA1-202ENST00000549621 SENP3-EIF4A1A0A087X0R7 540 aa29.21■■■□□ 2.27
RITA1-202ENST00000549621 CABP2Q9NPB3 220 aa29.2■■■□□ 2.26
RITA1-202ENST00000549621 NLRP1Q9C000 1473 aa29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms