RNA–Protein interactions for RNA: ENST00000549336.5

VDR-206, Transcript of vitamin D receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VDR, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-206ENST00000549336 ESCO1Q5FWF5 840 aa15.09■□□□□ 0.01
VDR-206ENST00000549336 LTV1Q96GA3 475 aaPredicted RBP15.09■□□□□ 0.01
VDR-206ENST00000549336 NBPF1Q3BBV0 1214 aa15.08■□□□□ 0
VDR-206ENST00000549336 ATAD2Q6PL18 1390 aa15.07■□□□□ 0
VDR-206ENST00000549336 CCDC7Q96M83 1385 aa15.07■□□□□ 0
VDR-206ENST00000549336 FAM135AQ9P2D6 1515 aa15.06■□□□□ 0
VDR-206ENST00000549336 CFAP74Q9C0B2 1584 aa15.06■□□□□ 0
VDR-206ENST00000549336 NLRP6P59044 892 aa15.05■□□□□ 0
VDR-206ENST00000549336 MEX3CQ5U5Q3 659 aaKnown RBP15.05■□□□□ 0
VDR-206ENST00000549336 NGEFQ8N5V2 710 aa15.05■□□□□ -0
VDR-206ENST00000549336 KIF7Q2M1P5 1343 aa15.05■□□□□ -0
VDR-206ENST00000549336 CDK19Q9BWU1 502 aa15.04■□□□□ -0
VDR-206ENST00000549336 WASHC2AQ641Q2 1341 aa15.04■□□□□ -0
VDR-206ENST00000549336 IPO8O15397 1037 aaKnown RBP15.04■□□□□ -0
VDR-206ENST00000549336 MAPKBP1O60336 1514 aa15.03■□□□□ -0
VDR-206ENST00000549336 PRKRIP1Q9H875 184 aaPredicted RBP15.03■□□□□ -0
VDR-206ENST00000549336 DIAPH1O60610 1272 aaKnown RBP15.03■□□□□ -0
VDR-206ENST00000549336 NBPF8Q3BBV2 869 aa15.03■□□□□ -0
VDR-206ENST00000549336 C1orf141Q5JVX7 400 aa15.02■□□□□ -0
VDR-206ENST00000549336 FRAT1Q92837 279 aaPredicted RBP15.02■□□□□ -0
VDR-206ENST00000549336 ABTB2Q8N961 1025 aa15.02□□□□□ -0.01
VDR-206ENST00000549336 SENP3-EIF4A1A0A087X0R7 540 aa15.01□□□□□ -0.01
VDR-206ENST00000549336 CCDC61Q9Y6R9 512 aa15.01□□□□□ -0.01
VDR-206ENST00000549336 ATP7AQ04656 1500 aa15.01□□□□□ -0.01
VDR-206ENST00000549336 PDE3BQ13370 1112 aa15.01□□□□□ -0.01
VDR-206ENST00000549336 PTPRKQ15262 1439 aa15□□□□□ -0.01
VDR-206ENST00000549336 STK31Q9BXU1 1019 aa15□□□□□ -0.01
VDR-206ENST00000549336 ZMYM3Q14202 1370 aa15□□□□□ -0.01
VDR-206ENST00000549336 AMOTL2Q9Y2J4 779 aa15□□□□□ -0.01
VDR-206ENST00000549336 RPRD2Q5VT52 1461 aaKnown RBP14.99□□□□□ -0.01
VDR-206ENST00000549336 EIF5BO60841 1220 aaKnown RBP14.99□□□□□ -0.01
VDR-206ENST00000549336 HDAC5Q9UQL6 1122 aa14.99□□□□□ -0.01
VDR-206ENST00000549336 GOLGA2Q08379 1002 aa14.98□□□□□ -0.01
VDR-206ENST00000549336 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.98□□□□□ -0.01
VDR-206ENST00000549336 RAPGEF4Q8WZA2 1011 aa14.98□□□□□ -0.01
VDR-206ENST00000549336 C14orf93Q9H972 538 aaKnown RBP14.98□□□□□ -0.01
VDR-206ENST00000549336 ADGRL2O95490 1459 aa14.98□□□□□ -0.01
VDR-206ENST00000549336 PMFBP1Q8TBY8 1022 aa14.97□□□□□ -0.01
VDR-206ENST00000549336 GGNBP2Q9H3C7 697 aa14.97□□□□□ -0.01
VDR-206ENST00000549336 MAGI2Q86UL8 1455 aa14.97□□□□□ -0.01
VDR-206ENST00000549336 DNMT1P26358 1616 aaKnown RBP14.97□□□□□ -0.01
VDR-206ENST00000549336 CABP1Q9NZU7 370 aa14.97□□□□□ -0.01
VDR-206ENST00000549336 NOS1P29475 1434 aa14.97□□□□□ -0.01
VDR-206ENST00000549336 ADGRF5Q8IZF2 1346 aa14.96□□□□□ -0.01
VDR-206ENST00000549336 TEFQ10587 303 aa14.96□□□□□ -0.01
VDR-206ENST00000549336 ZFYVE16Q7Z3T8 1539 aa14.96□□□□□ -0.01
VDR-206ENST00000549336 ANP32AP39687 249 aaKnown RBP14.95□□□□□ -0.02
VDR-206ENST00000549336 NUDT16Q96DE0 195 aaKnown RBP14.95□□□□□ -0.02
VDR-206ENST00000549336 SLC12A5Q9H2X9 1139 aa14.94□□□□□ -0.02
VDR-206ENST00000549336 MYO5CQ9NQX4 1742 aa14.94□□□□□ -0.02
VDR-206ENST00000549336 CADPS2Q86UW7 1296 aa14.94□□□□□ -0.02
VDR-206ENST00000549336 SUPT16HQ9Y5B9 1047 aaKnown RBP14.94□□□□□ -0.02
VDR-206ENST00000549336 NLRP2Q9NX02 1062 aa14.93□□□□□ -0.02
VDR-206ENST00000549336 CLASP1Q7Z460 1538 aa14.93□□□□□ -0.02
VDR-206ENST00000549336 ARHGEF5Q12774 1597 aa14.92□□□□□ -0.02
VDR-206ENST00000549336 ZCCHC11Q5TAX3 1644 aaKnown RBP14.92□□□□□ -0.02
VDR-206ENST00000549336 RIMS2Q9UQ26 1411 aa14.92□□□□□ -0.02
VDR-206ENST00000549336 CCDC146Q8IYE0 955 aa14.92□□□□□ -0.02
VDR-206ENST00000549336 OS9Q13438 667 aaPredicted RBP14.91□□□□□ -0.02
VDR-206ENST00000549336 LRPPRCP42704 1394 aaKnown RBP14.91□□□□□ -0.02
VDR-206ENST00000549336 IRX6P78412 446 aaPredicted RBP14.91□□□□□ -0.02
VDR-206ENST00000549336 NUTM2GQ5VZR2 741 aa14.91□□□□□ -0.02
VDR-206ENST00000549336 SMG6Q86US8 1419 aaKnown RBP14.91□□□□□ -0.02
VDR-206ENST00000549336 UHRF1BP1Q6BDS2 1440 aa14.9□□□□□ -0.02
VDR-206ENST00000549336 WAPLQ7Z5K2 1190 aa14.9□□□□□ -0.02
VDR-206ENST00000549336 SCAF11Q99590 1463 aaKnown RBP14.9□□□□□ -0.02
VDR-206ENST00000549336 WASLO00401 505 aaPredicted RBP14.9□□□□□ -0.02
VDR-206ENST00000549336 TTC5Q8N0Z6 440 aa14.9□□□□□ -0.02
VDR-206ENST00000549336 KCNH5Q8NCM2 988 aa14.9□□□□□ -0.02
VDR-206ENST00000549336 ERCC6L2Q5T890 1561 aa14.89□□□□□ -0.03
VDR-206ENST00000549336 ZNF330Q9Y3S2 320 aaPredicted RBP14.89□□□□□ -0.03
VDR-206ENST00000549336 MLH3Q9UHC1 1453 aa14.89□□□□□ -0.03
VDR-206ENST00000549336 RTL5Q5HYW3 569 aaPredicted RBP14.89□□□□□ -0.03
VDR-206ENST00000549336 HSP90AA1P07900 732 aaKnown RBP14.89□□□□□ -0.03
VDR-206ENST00000549336 PHF8Q9UPP1 1060 aa14.88□□□□□ -0.03
VDR-206ENST00000549336 MAGI3Q5TCQ9 1506 aa14.88□□□□□ -0.03
VDR-206ENST00000549336 CASC1Q6TDU7 716 aa14.88□□□□□ -0.03
VDR-206ENST00000549336 RUNDC1Q96C34 613 aa14.88□□□□□ -0.03
VDR-206ENST00000549336 MTHFSP49914 203 aa14.87□□□□□ -0.03
VDR-206ENST00000549336 RCAN3Q9UKA8 241 aa14.87□□□□□ -0.03
VDR-206ENST00000549336 MSH6P52701 1360 aa14.87□□□□□ -0.03
VDR-206ENST00000549336 BRD4O60885 1362 aaPredicted RBP14.86□□□□□ -0.03
VDR-206ENST00000549336 PIP4K2BP78356 416 aa14.86□□□□□ -0.03
VDR-206ENST00000549336 PRDM11Q9NQV5 511 aa14.86□□□□□ -0.03
VDR-206ENST00000549336 E9PSI1 815 aa14.86□□□□□ -0.03
VDR-206ENST00000549336 ARAP3Q8WWN8 1544 aa14.86□□□□□ -0.03
VDR-206ENST00000549336 NINLQ9Y2I6 1382 aa14.86□□□□□ -0.03
VDR-206ENST00000549336 TBX22Q9Y458 520 aa14.86□□□□□ -0.03
VDR-206ENST00000549336 MBD5Q9P267 1494 aa14.86□□□□□ -0.03
VDR-206ENST00000549336 SMC4Q9NTJ3 1288 aa14.86□□□□□ -0.03
VDR-206ENST00000549336 TMX4Q9H1E5 349 aaPredicted RBP14.85□□□□□ -0.03
VDR-206ENST00000549336 GAS2L2Q8NHY3 880 aa14.85□□□□□ -0.03
VDR-206ENST00000549336 TOM1O60784 492 aa14.85□□□□□ -0.03
VDR-206ENST00000549336 PLEKHO1Q53GL0 409 aaPredicted RBP14.84□□□□□ -0.03
VDR-206ENST00000549336 PPP4R2Q9NY27 417 aa14.84□□□□□ -0.03
VDR-206ENST00000549336 RIPK4P57078 832 aa14.83□□□□□ -0.04
VDR-206ENST00000549336 APAF1O14727 1248 aa14.83□□□□□ -0.04
VDR-206ENST00000549336 YEATS2Q9ULM3 1422 aa14.83□□□□□ -0.04
VDR-206ENST00000549336 RRP7AQ9Y3A4 280 aaKnown RBP14.83□□□□□ -0.04
VDR-206ENST00000549336 ABCC1P33527 1531 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms