RNA–Protein interactions for RNA: ENST00000549268.1

USP15-213, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 5

Gene USP15, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-213ENST00000549268 WBP1LQ9NX94 342 aa11.78□□□□□ -0.52
USP15-213ENST00000549268 HPS5Q9UPZ3 1129 aa11.78□□□□□ -0.52
USP15-213ENST00000549268 IRF6O14896 467 aa11.77□□□□□ -0.53
USP15-213ENST00000549268 SLC4A3P48751 1232 aa11.77□□□□□ -0.53
USP15-213ENST00000549268 PPP4CP60510 307 aa11.77□□□□□ -0.53
USP15-213ENST00000549268 ZC3H15Q8WU90 426 aaKnown RBP11.77□□□□□ -0.53
USP15-213ENST00000549268 ZMYND10O75800 440 aa11.76□□□□□ -0.53
USP15-213ENST00000549268 BARGINQ6ZT62 677 aa11.75□□□□□ -0.53
USP15-213ENST00000549268 PHOX2BQ99453 314 aa11.71□□□□□ -0.53
USP15-213ENST00000549268 DAXXQ9UER7 740 aaPredicted RBP11.7□□□□□ -0.54
USP15-213ENST00000549268 CCDC102AQ96A19 550 aa11.69□□□□□ -0.54
USP15-213ENST00000549268 RNF40O75150 1001 aa11.68□□□□□ -0.54
USP15-213ENST00000549268 IFFO2Q5TF58 517 aa11.68□□□□□ -0.54
USP15-213ENST00000549268 ITGBL1O95965 494 aaPredicted RBP11.67□□□□□ -0.54
USP15-213ENST00000549268 PRR14Q9BWN1 585 aa11.67□□□□□ -0.54
USP15-213ENST00000549268 PLA2G2EQ9NZK7 142 aa11.67□□□□□ -0.54
USP15-213ENST00000549268 RSPH4AQ5TD94 716 aa11.66□□□□□ -0.54
USP15-213ENST00000549268 KRI1Q8N9T8 703 aaKnown RBP11.66□□□□□ -0.54
USP15-213ENST00000549268 APLP1P51693 650 aa11.64□□□□□ -0.55
USP15-213ENST00000549268 SLC10A3P09131 477 aa11.63□□□□□ -0.55
USP15-213ENST00000549268 SULF1Q8IWU6 871 aa11.63□□□□□ -0.55
USP15-213ENST00000549268 NLRP7Q8WX94 980 aa11.61□□□□□ -0.55
USP15-213ENST00000549268 KMT5BQ4FZB7 885 aa11.6□□□□□ -0.55
USP15-213ENST00000549268 ACTN4O43707 911 aaKnown RBP11.59□□□□□ -0.55
USP15-213ENST00000549268 CLCN1P35523 988 aa11.59□□□□□ -0.55
USP15-213ENST00000549268 TMUB1Q9BVT8 246 aa11.59□□□□□ -0.55
USP15-213ENST00000549268 CFHP08603 1231 aa11.58□□□□□ -0.56
USP15-213ENST00000549268 KCNC4Q03721 635 aa11.58□□□□□ -0.56
USP15-213ENST00000549268 AMHR2Q16671 573 aa11.58□□□□□ -0.56
USP15-213ENST00000549268 TJAP1Q5JTD0 557 aa11.58□□□□□ -0.56
USP15-213ENST00000549268 AK7Q96M32 723 aa11.58□□□□□ -0.56
USP15-213ENST00000549268 DDX11L8A8MPP1 907 aa11.57□□□□□ -0.56
USP15-213ENST00000549268 MDM2Q00987 491 aaPredicted RBP11.57□□□□□ -0.56
USP15-213ENST00000549268 GPCPD1Q9NPB8 672 aa11.57□□□□□ -0.56
USP15-213ENST00000549268 IL21Q9HBE4 155 aa11.56□□□□□ -0.56
USP15-213ENST00000549268 MTRQ99707 1265 aa11.55□□□□□ -0.56
USP15-213ENST00000549268 GCGRP47871 477 aa11.54□□□□□ -0.56
USP15-213ENST00000549268 RDH13Q8NBN7 331 aa11.54□□□□□ -0.56
USP15-213ENST00000549268 PCDHB3Q9Y5E6 796 aa11.54□□□□□ -0.56
USP15-213ENST00000549268 CD46P15529 392 aa11.53□□□□□ -0.56
USP15-213ENST00000549268 TRIM66O15016 1216 aa11.52□□□□□ -0.57
USP15-213ENST00000549268 FAM217BQ9NTX9 383 aaPredicted RBP11.52□□□□□ -0.57
USP15-213ENST00000549268 SLC24A3Q9HC58 644 aa11.49□□□□□ -0.57
USP15-213ENST00000549268 A0A0G2JS52 829 aa11.48□□□□□ -0.57
USP15-213ENST00000549268 BLOC1S3Q6QNY0 202 aa11.48□□□□□ -0.57
USP15-213ENST00000549268 REPIN1Q9BWE0 567 aaKnown RBP11.48□□□□□ -0.57
USP15-213ENST00000549268 ZPR1O75312 459 aa11.47□□□□□ -0.57
USP15-213ENST00000549268 COPS2P61201 443 aa11.47□□□□□ -0.57
USP15-213ENST00000549268 TTLL12Q14166 644 aaPredicted RBP11.47□□□□□ -0.57
USP15-213ENST00000549268 ZNF516Q92618 1163 aa11.47□□□□□ -0.57
USP15-213ENST00000549268 NR1I2O75469 434 aa11.46□□□□□ -0.57
USP15-213ENST00000549268 ATP6V1AP38606 617 aa11.46□□□□□ -0.57
USP15-213ENST00000549268 FUT2Q10981 343 aa11.45□□□□□ -0.58
USP15-213ENST00000549268 SSTR3P32745 418 aaPredicted RBP11.44□□□□□ -0.58
USP15-213ENST00000549268 USP46P62068 366 aa11.44□□□□□ -0.58
USP15-213ENST00000549268 GRIPAP1Q4V328 841 aa11.44□□□□□ -0.58
USP15-213ENST00000549268 PARP9Q8IXQ6 854 aa11.44□□□□□ -0.58
USP15-213ENST00000549268 KDM4AO75164 1064 aa11.43□□□□□ -0.58
USP15-213ENST00000549268 RGS20O76081 388 aa11.43□□□□□ -0.58
USP15-213ENST00000549268 MORN1Q5T089 497 aa11.43□□□□□ -0.58
USP15-213ENST00000549268 GIGYF2Q6Y7W6 1299 aaKnown RBP11.43□□□□□ -0.58
USP15-213ENST00000549268 PDE4DQ08499 809 aa11.42□□□□□ -0.58
USP15-213ENST00000549268 SCUBE3Q8IX30 993 aa11.42□□□□□ -0.58
USP15-213ENST00000549268 PUS10Q3MIT2 529 aaKnown RBP11.4□□□□□ -0.58
USP15-213ENST00000549268 SALL2Q9Y467 1007 aaPredicted RBP11.4□□□□□ -0.58
USP15-213ENST00000549268 NKX2-3Q8TAU0 364 aa11.39□□□□□ -0.59
USP15-213ENST00000549268 SLC27A5Q9Y2P5 690 aa11.37□□□□□ -0.59
USP15-213ENST00000549268 THAP11Q96EK4 314 aa11.36□□□□□ -0.59
USP15-213ENST00000549268 HOXA2O43364 376 aa11.35□□□□□ -0.59
USP15-213ENST00000549268 ADH1BP00325 375 aa11.35□□□□□ -0.59
USP15-213ENST00000549268 GGCXP38435 758 aa11.35□□□□□ -0.59
USP15-213ENST00000549268 PPP1R18Q6NYC8 613 aa11.35□□□□□ -0.59
USP15-213ENST00000549268 NUTM1Q86Y26 1132 aa11.35□□□□□ -0.59
USP15-213ENST00000549268 MS4A1P11836 297 aa11.34□□□□□ -0.59
USP15-213ENST00000549268 Q3C1V9 767 aa11.34□□□□□ -0.59
USP15-213ENST00000549268 BEGAINQ9BUH8 593 aa11.34□□□□□ -0.59
USP15-213ENST00000549268 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.34□□□□□ -0.59
USP15-213ENST00000549268 TLL1O43897 1013 aa11.33□□□□□ -0.6
USP15-213ENST00000549268 FMNL1O95466 1100 aaPredicted RBP11.33□□□□□ -0.6
USP15-213ENST00000549268 DIXDC1Q155Q3 683 aa11.33□□□□□ -0.6
USP15-213ENST00000549268 BRICD5Q6PL45 260 aa11.33□□□□□ -0.6
USP15-213ENST00000549268 SPSB2Q99619 263 aa11.33□□□□□ -0.6
USP15-213ENST00000549268 SPIRE2Q8WWL2 714 aa11.32□□□□□ -0.6
USP15-213ENST00000549268 GJA5P36382 358 aa11.29□□□□□ -0.6
USP15-213ENST00000549268 SLC6A16Q9GZN6 736 aa11.29□□□□□ -0.6
USP15-213ENST00000549268 MSS51Q4VC12 460 aa11.27□□□□□ -0.61
USP15-213ENST00000549268 TBC1D2Q9BYX2 928 aa11.27□□□□□ -0.61
USP15-213ENST00000549268 RNF223E7ERA6 249 aa11.26□□□□□ -0.61
USP15-213ENST00000549268 S1PR4O95977 384 aa11.26□□□□□ -0.61
USP15-213ENST00000549268 RNF19BQ6ZMZ0 732 aa11.26□□□□□ -0.61
USP15-213ENST00000549268 FAM160A2Q8N612 972 aaPredicted RBP11.26□□□□□ -0.61
USP15-213ENST00000549268 HLA-CQ95604 372 aa11.26□□□□□ -0.61
USP15-213ENST00000549268 FDX1P10109 184 aa11.25□□□□□ -0.61
USP15-213ENST00000549268 ANKLE1Q8NAG6 615 aa11.25□□□□□ -0.61
USP15-213ENST00000549268 MOXD2PA6NHM9 499 aa11.24□□□□□ -0.61
USP15-213ENST00000549268 NEUROD2Q15784 382 aa11.24□□□□□ -0.61
USP15-213ENST00000549268 USB1Q9BQ65 265 aaKnown RBP11.24□□□□□ -0.61
USP15-213ENST00000549268 KDM4CQ9H3R0 1056 aa11.24□□□□□ -0.61
USP15-213ENST00000549268 PCDHGC3Q9UN70 934 aa11.23□□□□□ -0.61
USP15-213ENST00000549268 V9GY48 417 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms