RNA–Protein interactions for RNA: ENST00000549107.5

PTPRR-208, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 2

Gene PTPRR, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-208ENST00000549107 KDM4FA0A1W2PPD8 638 aa15.76■□□□□ 0.11
PTPRR-208ENST00000549107 CCDC7Q96M83 1385 aa15.75■□□□□ 0.11
PTPRR-208ENST00000549107 SPATA31D1Q6ZQQ2 1576 aa15.75■□□□□ 0.11
PTPRR-208ENST00000549107 CHGAP10645 457 aaKnown RBP15.75■□□□□ 0.11
PTPRR-208ENST00000549107 NBPF1Q3BBV0 1214 aa15.75■□□□□ 0.11
PTPRR-208ENST00000549107 NRXN1Q9ULB1 1477 aa15.75■□□□□ 0.11
PTPRR-208ENST00000549107 ARID4BQ4LE39 1312 aaPredicted RBP15.74■□□□□ 0.11
PTPRR-208ENST00000549107 SLC52A1Q9NWF4 448 aa15.74■□□□□ 0.11
PTPRR-208ENST00000549107 C11orf95C9JLR9 678 aaPredicted RBP15.73■□□□□ 0.11
PTPRR-208ENST00000549107 FBXO31Q5XUX0 539 aaPredicted RBP15.73■□□□□ 0.11
PTPRR-208ENST00000549107 TMEM131LA2VDJ0 1609 aa15.72■□□□□ 0.11
PTPRR-208ENST00000549107 RPGRIP1LQ68CZ1 1315 aa15.72■□□□□ 0.11
PTPRR-208ENST00000549107 IDI1Q13907 227 aa15.72■□□□□ 0.11
PTPRR-208ENST00000549107 ILDR1Q86SU0 546 aaPredicted RBP15.72■□□□□ 0.11
PTPRR-208ENST00000549107 IQGAP1P46940 1657 aa15.72■□□□□ 0.11
PTPRR-208ENST00000549107 NEXMIFQ5QGS0 1516 aa15.72■□□□□ 0.11
PTPRR-208ENST00000549107 KIF7Q2M1P5 1343 aa15.71■□□□□ 0.11
PTPRR-208ENST00000549107 ADGRF5Q8IZF2 1346 aa15.71■□□□□ 0.11
PTPRR-208ENST00000549107 MYO5BQ9ULV0 1848 aa15.71■□□□□ 0.11
PTPRR-208ENST00000549107 ESF1Q9H501 851 aaKnown RBP15.71■□□□□ 0.11
PTPRR-208ENST00000549107 ZMYM3Q14202 1370 aa15.7■□□□□ 0.1
PTPRR-208ENST00000549107 ST20-MTHFSA0A0A6YYL1 179 aa15.69■□□□□ 0.1
PTPRR-208ENST00000549107 PIK3C2GO75747 1445 aa15.68■□□□□ 0.1
PTPRR-208ENST00000549107 SCAF11Q99590 1463 aaKnown RBP15.67■□□□□ 0.1
PTPRR-208ENST00000549107 SETBP1Q9Y6X0 1596 aa15.66■□□□□ 0.1
PTPRR-208ENST00000549107 FER1L4A9Z1Z3 1794 aa15.65■□□□□ 0.1
PTPRR-208ENST00000549107 CFAP70Q5T0N1 1121 aa15.65■□□□□ 0.1
PTPRR-208ENST00000549107 ZFYVE9O95405 1425 aa15.65■□□□□ 0.1
PTPRR-208ENST00000549107 A2ML1A8K2U0 1454 aa15.63■□□□□ 0.09
PTPRR-208ENST00000549107 TNRQ92752 1358 aa15.62■□□□□ 0.09
PTPRR-208ENST00000549107 VGFO15240 615 aaPredicted RBP15.62■□□□□ 0.09
PTPRR-208ENST00000549107 ADGRB1O14514 1584 aa15.62■□□□□ 0.09
PTPRR-208ENST00000549107 EIF3AQ14152 1382 aaKnown RBP15.62■□□□□ 0.09
PTPRR-208ENST00000549107 C3P01024 1663 aa15.61■□□□□ 0.09
PTPRR-208ENST00000549107 ANP32CO43423 234 aa15.61■□□□□ 0.09
PTPRR-208ENST00000549107 TESK2Q96S53 571 aa15.61■□□□□ 0.09
PTPRR-208ENST00000549107 C14orf93Q9H972 538 aaKnown RBP15.61■□□□□ 0.09
PTPRR-208ENST00000549107 NUTM2DQ5VT03 806 aaPredicted RBP15.6■□□□□ 0.09
PTPRR-208ENST00000549107 STAG3Q9UJ98 1225 aa15.6■□□□□ 0.09
PTPRR-208ENST00000549107 MYO3AQ8NEV4 1616 aa15.59■□□□□ 0.09
PTPRR-208ENST00000549107 POLR3GLQ9BT43 218 aa15.59■□□□□ 0.09
PTPRR-208ENST00000549107 KDM5AP29375 1690 aaKnown RBP15.59■□□□□ 0.09
PTPRR-208ENST00000549107 DISP3Q9P2K9 1392 aa15.58■□□□□ 0.08
PTPRR-208ENST00000549107 RIMS2Q9UQ26 1411 aa15.57■□□□□ 0.08
PTPRR-208ENST00000549107 UBR1Q8IWV7 1749 aa15.57■□□□□ 0.08
PTPRR-208ENST00000549107 TMF1P82094 1093 aa15.56■□□□□ 0.08
PTPRR-208ENST00000549107 ASXL1Q8IXJ9 1541 aa15.55■□□□□ 0.08
PTPRR-208ENST00000549107 NLRP1Q9C000 1473 aa15.55■□□□□ 0.08
PTPRR-208ENST00000549107 RIMS1Q86UR5 1692 aaKnown RBP15.54■□□□□ 0.08
PTPRR-208ENST00000549107 CEBPAP49715 358 aaPredicted RBP15.53■□□□□ 0.08
PTPRR-208ENST00000549107 ARHGEF28Q8N1W1 1705 aaKnown RBP15.52■□□□□ 0.08
PTPRR-208ENST00000549107 ADAMTSL3P82987 1691 aa15.52■□□□□ 0.08
PTPRR-208ENST00000549107 QRICH2Q9H0J4 1663 aa15.52■□□□□ 0.08
PTPRR-208ENST00000549107 CCER2I3L3R5 266 aa15.52■□□□□ 0.08
PTPRR-208ENST00000549107 TMEM132EQ6IEE7 984 aa15.52■□□□□ 0.08
PTPRR-208ENST00000549107 ALKQ9UM73 1620 aa15.52■□□□□ 0.08
PTPRR-208ENST00000549107 SBNO2Q9Y2G9 1366 aa15.5■□□□□ 0.07
PTPRR-208ENST00000549107 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.5■□□□□ 0.07
PTPRR-208ENST00000549107 TRAK1Q9UPV9 953 aa15.5■□□□□ 0.07
PTPRR-208ENST00000549107 SETD1AO15047 1707 aaKnown RBP15.5■□□□□ 0.07
PTPRR-208ENST00000549107 CENPJQ9HC77 1338 aaPredicted RBP15.49■□□□□ 0.07
PTPRR-208ENST00000549107 YTHDC1Q96MU7 727 aaKnown RBP15.49■□□□□ 0.07
PTPRR-208ENST00000549107 NRXN3Q9Y4C0 1643 aa15.49■□□□□ 0.07
PTPRR-208ENST00000549107 TMEM2Q9UHN6 1383 aa15.49■□□□□ 0.07
PTPRR-208ENST00000549107 SLC24A1O60721 1099 aa15.48■□□□□ 0.07
PTPRR-208ENST00000549107 CDCA8Q53HL2 280 aa15.48■□□□□ 0.07
PTPRR-208ENST00000549107 PTPRMP28827 1452 aa15.47■□□□□ 0.07
PTPRR-208ENST00000549107 PRKRIP1Q9H875 184 aaPredicted RBP15.47■□□□□ 0.07
PTPRR-208ENST00000549107 MYOM1P52179 1685 aa15.47■□□□□ 0.07
PTPRR-208ENST00000549107 YTHDC2Q9H6S0 1430 aaKnown RBP15.46■□□□□ 0.07
PTPRR-208ENST00000549107 HDGFP51858 240 aaKnown RBP15.46■□□□□ 0.07
PTPRR-208ENST00000549107 SLIT1O75093 1534 aa15.44■□□□□ 0.06
PTPRR-208ENST00000549107 ARHGAP23Q9P227 1491 aa15.44■□□□□ 0.06
PTPRR-208ENST00000549107 DLC1Q96QB1 1528 aa15.43■□□□□ 0.06
PTPRR-208ENST00000549107 CEP170BQ9Y4F5 1589 aaPredicted RBP15.42■□□□□ 0.06
PTPRR-208ENST00000549107 STK26Q9P289 416 aa15.42■□□□□ 0.06
PTPRR-208ENST00000549107 LRPPRCP42704 1394 aaKnown RBP15.41■□□□□ 0.06
PTPRR-208ENST00000549107 CENPBP07199 599 aaPredicted RBP15.41■□□□□ 0.06
PTPRR-208ENST00000549107 PANK3Q9H999 370 aa15.41■□□□□ 0.06
PTPRR-208ENST00000549107 TULP4Q9NRJ4 1543 aa15.41■□□□□ 0.06
PTPRR-208ENST00000549107 PLEKHG1Q9ULL1 1385 aa15.4■□□□□ 0.06
PTPRR-208ENST00000549107 ZNF142P52746 1687 aaPredicted RBP15.4■□□□□ 0.06
PTPRR-208ENST00000549107 PER1O15534 1290 aaPredicted RBP15.39■□□□□ 0.05
PTPRR-208ENST00000549107 KNDC1Q76NI1 1749 aa15.39■□□□□ 0.05
PTPRR-208ENST00000549107 METP08581 1390 aa15.38■□□□□ 0.05
PTPRR-208ENST00000549107 KTN1Q86UP2 1357 aaKnown RBP15.38■□□□□ 0.05
PTPRR-208ENST00000549107 ADAMTS13Q76LX8 1427 aa15.38■□□□□ 0.05
PTPRR-208ENST00000549107 LTKP29376 864 aa15.38■□□□□ 0.05
PTPRR-208ENST00000549107 TXNDC2Q86VQ3 553 aa15.37■□□□□ 0.05
PTPRR-208ENST00000549107 THEMISQ8N1K5 641 aaPredicted RBP15.37■□□□□ 0.05
PTPRR-208ENST00000549107 PRAM1Q96QH2 718 aa15.37■□□□□ 0.05
PTPRR-208ENST00000549107 EID1Q9Y6B2 187 aa15.37■□□□□ 0.05
PTPRR-208ENST00000549107 EVC2Q86UK5 1308 aa15.37■□□□□ 0.05
PTPRR-208ENST00000549107 ABCC11Q96J66 1382 aa15.36■□□□□ 0.05
PTPRR-208ENST00000549107 CNGB1Q14028 1251 aaPredicted RBP15.36■□□□□ 0.05
PTPRR-208ENST00000549107 BCANQ96GW7 911 aa15.36■□□□□ 0.05
PTPRR-208ENST00000549107 MED14O60244 1454 aa15.35■□□□□ 0.05
PTPRR-208ENST00000549107 CPS1P31327 1500 aa15.35■□□□□ 0.05
PTPRR-208ENST00000549107 SAFB2Q14151 953 aaKnown RBP eCLIP15.35■□□□□ 0.05
PTPRR-208ENST00000549107 RALBP1Q15311 655 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms