RNA–Protein interactions for RNA: ENST00000549049.5

SLC38A1-206, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 3,196 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-206ENST00000549049 CLUAP1Q96AJ1 413 aa16.09■□□□□ 0.17
SLC38A1-206ENST00000549049 FAM161AQ3B820 660 aa16.08■□□□□ 0.17
SLC38A1-206ENST00000549049 ARXQ96QS3 562 aa16.08■□□□□ 0.16
SLC38A1-206ENST00000549049 GPRASP1Q5JY77 1395 aa16.08■□□□□ 0.16
SLC38A1-206ENST00000549049 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.08■□□□□ 0.16
SLC38A1-206ENST00000549049 CDCA8Q53HL2 280 aa16.07■□□□□ 0.16
SLC38A1-206ENST00000549049 TRAK1Q9UPV9 953 aa16.07■□□□□ 0.16
SLC38A1-206ENST00000549049 BLMP54132 1417 aaPredicted RBP16.06■□□□□ 0.16
SLC38A1-206ENST00000549049 IGHDP01880 384 aa16.06■□□□□ 0.16
SLC38A1-206ENST00000549049 KDM2BQ8NHM5 1336 aa16.06■□□□□ 0.16
SLC38A1-206ENST00000549049 SAFB2Q14151 953 aaKnown RBP eCLIP16.06■□□□□ 0.16
SLC38A1-206ENST00000549049 C8orf34Q49A92 452 aa16.06■□□□□ 0.16
SLC38A1-206ENST00000549049 TRPM1Q7Z4N2 1603 aa16.05■□□□□ 0.16
SLC38A1-206ENST00000549049 FRAT2O75474 233 aaPredicted RBP16.05■□□□□ 0.16
SLC38A1-206ENST00000549049 TNNQ9UQP3 1299 aa16.05■□□□□ 0.16
SLC38A1-206ENST00000549049 TRAPPC8Q9Y2L5 1435 aa16.04■□□□□ 0.16
SLC38A1-206ENST00000549049 CARD14Q9BXL6 1004 aa16.04■□□□□ 0.16
SLC38A1-206ENST00000549049 SLKQ9H2G2 1235 aaPredicted RBP16.04■□□□□ 0.16
SLC38A1-206ENST00000549049 ADGRF5Q8IZF2 1346 aa16.04■□□□□ 0.16
SLC38A1-206ENST00000549049 SPRYD3Q8NCJ5 442 aa16.03■□□□□ 0.16
SLC38A1-206ENST00000549049 TMEM132EQ6IEE7 984 aa16.03■□□□□ 0.16
SLC38A1-206ENST00000549049 SLC12A5Q9H2X9 1139 aa16.02■□□□□ 0.15
SLC38A1-206ENST00000549049 MORC1Q86VD1 984 aa16.01■□□□□ 0.15
SLC38A1-206ENST00000549049 SEC24BO95487 1268 aa16.01■□□□□ 0.15
SLC38A1-206ENST00000549049 TTC37Q6PGP7 1564 aa16.01■□□□□ 0.15
SLC38A1-206ENST00000549049 CDC42BPBQ9Y5S2 1711 aa16.01■□□□□ 0.15
SLC38A1-206ENST00000549049 WDR7Q9Y4E6 1490 aa16.01■□□□□ 0.15
SLC38A1-206ENST00000549049 GSE1Q14687 1217 aa16.01■□□□□ 0.15
SLC38A1-206ENST00000549049 ZMYM4Q5VZL5 1548 aa16■□□□□ 0.15
SLC38A1-206ENST00000549049 ARHGEF5Q12774 1597 aa16■□□□□ 0.15
SLC38A1-206ENST00000549049 E9PCH4 1651 aa16■□□□□ 0.15
SLC38A1-206ENST00000549049 USP35Q9P2H5 1018 aa16■□□□□ 0.15
SLC38A1-206ENST00000549049 CENPJQ9HC77 1338 aaPredicted RBP15.99■□□□□ 0.15
SLC38A1-206ENST00000549049 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.99■□□□□ 0.15
SLC38A1-206ENST00000549049 ZNF521Q96K83 1311 aa15.99■□□□□ 0.15
SLC38A1-206ENST00000549049 E9PSI1 815 aa15.98■□□□□ 0.15
SLC38A1-206ENST00000549049 GGT6Q6P531 493 aa15.98■□□□□ 0.15
SLC38A1-206ENST00000549049 PRDM15P57071 1507 aaPredicted RBP15.98■□□□□ 0.15
SLC38A1-206ENST00000549049 ERCC6L2Q5T890 1561 aa15.97■□□□□ 0.15
SLC38A1-206ENST00000549049 WWC1Q8IX03 1113 aa15.96■□□□□ 0.15
SLC38A1-206ENST00000549049 TCP11L2Q8N4U5 519 aa15.95■□□□□ 0.14
SLC38A1-206ENST00000549049 SCAPERQ9BY12 1400 aa15.94■□□□□ 0.14
SLC38A1-206ENST00000549049 PREX2Q70Z35 1606 aa15.93■□□□□ 0.14
SLC38A1-206ENST00000549049 RLBP1P12271 317 aa15.93■□□□□ 0.14
SLC38A1-206ENST00000549049 MTHFSP49914 203 aa15.93■□□□□ 0.14
SLC38A1-206ENST00000549049 SCAF11Q99590 1463 aaKnown RBP15.93■□□□□ 0.14
SLC38A1-206ENST00000549049 U2AF1L5P0DN76 240 aaPredicted RBP15.93■□□□□ 0.14
SLC38A1-206ENST00000549049 U2AF1Q01081 240 aaKnown RBP eCLIP15.93■□□□□ 0.142e-6■□□□□ 9.2
SLC38A1-206ENST00000549049 U2SURPO15042 1029 aaKnown RBP15.92■□□□□ 0.14
SLC38A1-206ENST00000549049 STK26Q9P289 416 aa15.92■□□□□ 0.14
SLC38A1-206ENST00000549049 KANK1Q14678 1352 aa15.92■□□□□ 0.14
SLC38A1-206ENST00000549049 DUOX2Q9NRD8 1548 aa15.91■□□□□ 0.14
SLC38A1-206ENST00000549049 EIF3AQ14152 1382 aaKnown RBP15.91■□□□□ 0.14
SLC38A1-206ENST00000549049 ASXL1Q8IXJ9 1541 aa15.91■□□□□ 0.14
SLC38A1-206ENST00000549049 PCDHB15Q9Y5E8 787 aa15.91■□□□□ 0.14
SLC38A1-206ENST00000549049 NKTRP30414 1462 aaKnown RBP15.91■□□□□ 0.14
SLC38A1-206ENST00000549049 PLCH2O75038 1416 aa15.9■□□□□ 0.14
SLC38A1-206ENST00000549049 EIF5BO60841 1220 aaKnown RBP15.9■□□□□ 0.14
SLC38A1-206ENST00000549049 TSR2Q969E8 191 aaKnown RBP15.9■□□□□ 0.14
SLC38A1-206ENST00000549049 TRMT2AQ8IZ69 625 aaKnown RBP15.89■□□□□ 0.13
SLC38A1-206ENST00000549049 UGGT1Q9NYU2 1555 aa15.89■□□□□ 0.13
SLC38A1-206ENST00000549049 CGNL1Q0VF96 1302 aa15.88■□□□□ 0.13
SLC38A1-206ENST00000549049 ATP10AO60312 1499 aa15.88■□□□□ 0.13
SLC38A1-206ENST00000549049 MYO5CQ9NQX4 1742 aa15.88■□□□□ 0.13
SLC38A1-206ENST00000549049 POGKQ9P215 609 aa15.87■□□□□ 0.13
SLC38A1-206ENST00000549049 RARSP54136 660 aaKnown RBP15.87■□□□□ 0.13
SLC38A1-206ENST00000549049 CABP2Q9NPB3 220 aa15.87■□□□□ 0.13
SLC38A1-206ENST00000549049 PDZRN3Q9UPQ7 1066 aa15.87■□□□□ 0.13
SLC38A1-206ENST00000549049 NSD3Q9BZ95 1437 aa15.86■□□□□ 0.13
SLC38A1-206ENST00000549049 MAST1Q9Y2H9 1570 aa15.86■□□□□ 0.13
SLC38A1-206ENST00000549049 FTSJ3Q8IY81 847 aaKnown RBP15.86■□□□□ 0.13
SLC38A1-206ENST00000549049 RUNDC1Q96C34 613 aa15.86■□□□□ 0.13
SLC38A1-206ENST00000549049 GZF1Q9H116 711 aaPredicted RBP15.86■□□□□ 0.13
SLC38A1-206ENST00000549049 EIF2AK4Q9P2K8 1649 aaKnown RBP15.86■□□□□ 0.13
SLC38A1-206ENST00000549049 UNC13BO14795 1591 aa15.86■□□□□ 0.13
SLC38A1-206ENST00000549049 PIK3C2GO75747 1445 aa15.85■□□□□ 0.13
SLC38A1-206ENST00000549049 PDE3AQ14432 1141 aa15.85■□□□□ 0.13
SLC38A1-206ENST00000549049 IQGAP3Q86VI3 1631 aa15.85■□□□□ 0.13
SLC38A1-206ENST00000549049 UPF2Q9HAU5 1272 aaKnown RBP15.84■□□□□ 0.13
SLC38A1-206ENST00000549049 USP19O94966 1318 aa15.84■□□□□ 0.13
SLC38A1-206ENST00000549049 GGNBP2Q9H3C7 697 aa15.83■□□□□ 0.13
SLC38A1-206ENST00000549049 MFAP1P55081 439 aaKnown RBP15.83■□□□□ 0.12
SLC38A1-206ENST00000549049 CFAP53Q96M91 514 aa15.83■□□□□ 0.12
SLC38A1-206ENST00000549049 BECN1Q14457 450 aa15.83■□□□□ 0.12
SLC38A1-206ENST00000549049 INSRP06213 1382 aa15.83■□□□□ 0.12
SLC38A1-206ENST00000549049 CFAP65Q6ZU64 1925 aaKnown RBP15.82■□□□□ 0.12
SLC38A1-206ENST00000549049 SMC4Q9NTJ3 1288 aa15.81■□□□□ 0.12
SLC38A1-206ENST00000549049 NOS1P29475 1434 aa15.81■□□□□ 0.12
SLC38A1-206ENST00000549049 SRPK2P78362 688 aaKnown RBP15.81■□□□□ 0.12
SLC38A1-206ENST00000549049 ITPRIPQ8IWB1 547 aa15.81■□□□□ 0.12
SLC38A1-206ENST00000549049 FBLN1P23142 703 aa15.81■□□□□ 0.12
SLC38A1-206ENST00000549049 ERVK-7P63135 1459 aa15.8■□□□□ 0.12
SLC38A1-206ENST00000549049 ABCC2Q92887 1545 aa15.8■□□□□ 0.12
SLC38A1-206ENST00000549049 EXOSC9Q06265 439 aaKnown RBP15.79■□□□□ 0.12
SLC38A1-206ENST00000549049 MAPK8IP3Q9UPT6 1336 aa15.79■□□□□ 0.12
SLC38A1-206ENST00000549049 MADDQ8WXG6 1647 aa15.79■□□□□ 0.12
SLC38A1-206ENST00000549049 PMFBP1Q8TBY8 1022 aa15.79■□□□□ 0.12
SLC38A1-206ENST00000549049 CLTCL1P53675 1640 aa15.78■□□□□ 0.12
SLC38A1-206ENST00000549049 RWDD1Q9H446 243 aaPredicted RBP15.78■□□□□ 0.12
SLC38A1-206ENST00000549049 MINK1Q8N4C8 1332 aaPredicted RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms