RNA–Protein interactions for RNA: ENST00000548796.1

PACS2-208, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

TSL 5

Gene PACS2, Length 1,621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-208ENST00000548796 SCAF11Q99590 1463 aaKnown RBP27.49■■□□□ 1.99
PACS2-208ENST00000548796 CHGAP10645 457 aaKnown RBP27.49■■□□□ 1.99
PACS2-208ENST00000548796 PREX1Q8TCU6 1659 aa27.48■■□□□ 1.99
PACS2-208ENST00000548796 PPLO60437 1756 aa27.47■■□□□ 1.99
PACS2-208ENST00000548796 POLR3GLQ9BT43 218 aa27.46■■□□□ 1.99
PACS2-208ENST00000548796 ADGRF5Q8IZF2 1346 aa27.44■■□□□ 1.98
PACS2-208ENST00000548796 TESK2Q96S53 571 aa27.44■■□□□ 1.98
PACS2-208ENST00000548796 EIF3AQ14152 1382 aaKnown RBP27.44■■□□□ 1.98
PACS2-208ENST00000548796 PRKRIP1Q9H875 184 aaPredicted RBP27.43■■□□□ 1.98
PACS2-208ENST00000548796 TMF1P82094 1093 aa27.41■■□□□ 1.98
PACS2-208ENST00000548796 SETBP1Q9Y6X0 1596 aa27.39■■□□□ 1.98
PACS2-208ENST00000548796 ERVK-7P63135 1459 aa27.39■■□□□ 1.98
PACS2-208ENST00000548796 CLTCQ00610 1675 aaKnown RBP27.39■■□□□ 1.98
PACS2-208ENST00000548796 SLC24A1O60721 1099 aa27.38■■□□□ 1.97
PACS2-208ENST00000548796 IDI1Q13907 227 aa27.38■■□□□ 1.97
PACS2-208ENST00000548796 PIK3C2GO75747 1445 aa27.38■■□□□ 1.97
PACS2-208ENST00000548796 CFAP70Q5T0N1 1121 aa27.38■■□□□ 1.97
PACS2-208ENST00000548796 NEXMIFQ5QGS0 1516 aa27.35■■□□□ 1.97
PACS2-208ENST00000548796 VGFO15240 615 aaPredicted RBP27.35■■□□□ 1.97
PACS2-208ENST00000548796 DISP3Q9P2K9 1392 aa27.33■■□□□ 1.97
PACS2-208ENST00000548796 ZFYVE9O95405 1425 aa27.33■■□□□ 1.97
PACS2-208ENST00000548796 CDCA8Q53HL2 280 aa27.33■■□□□ 1.97
PACS2-208ENST00000548796 C14orf93Q9H972 538 aaKnown RBP27.33■■□□□ 1.97
PACS2-208ENST00000548796 SPATA31D1Q6ZQQ2 1576 aa27.32■■□□□ 1.96
PACS2-208ENST00000548796 TMEM131LA2VDJ0 1609 aa27.32■■□□□ 1.96
PACS2-208ENST00000548796 ESF1Q9H501 851 aaKnown RBP27.3■■□□□ 1.96
PACS2-208ENST00000548796 KTN1Q86UP2 1357 aaKnown RBP27.29■■□□□ 1.96
PACS2-208ENST00000548796 MLECQ14165 292 aa27.29■■□□□ 1.96
PACS2-208ENST00000548796 FBXO31Q5XUX0 539 aaPredicted RBP27.28■■□□□ 1.96
PACS2-208ENST00000548796 MYO3AQ8NEV4 1616 aa27.27■■□□□ 1.96
PACS2-208ENST00000548796 SCAF1Q9H7N4 1312 aaKnown RBP27.25■■□□□ 1.95
PACS2-208ENST00000548796 ADGRB1O14514 1584 aa27.24■■□□□ 1.95
PACS2-208ENST00000548796 SBNO2Q9Y2G9 1366 aa27.23■■□□□ 1.95
PACS2-208ENST00000548796 MYO5BQ9ULV0 1848 aa27.22■■□□□ 1.95
PACS2-208ENST00000548796 TRHP20396 242 aaPredicted RBP27.22■■□□□ 1.95
PACS2-208ENST00000548796 ZMYM3Q14202 1370 aa27.22■■□□□ 1.95
PACS2-208ENST00000548796 RALBP1Q15311 655 aa27.19■■□□□ 1.94
PACS2-208ENST00000548796 MRS2Q9HD23 443 aa27.19■■□□□ 1.94
PACS2-208ENST00000548796 STAG3Q9UJ98 1225 aa27.19■■□□□ 1.94
PACS2-208ENST00000548796 CENPJQ9HC77 1338 aaPredicted RBP27.17■■□□□ 1.94
PACS2-208ENST00000548796 KDM5AP29375 1690 aaKnown RBP27.16■■□□□ 1.94
PACS2-208ENST00000548796 PER1O15534 1290 aaPredicted RBP27.16■■□□□ 1.94
PACS2-208ENST00000548796 GTF3C3Q9Y5Q9 886 aa27.16■■□□□ 1.94
PACS2-208ENST00000548796 A2ML1A8K2U0 1454 aa27.14■■□□□ 1.94
PACS2-208ENST00000548796 PANK3Q9H999 370 aa27.14■■□□□ 1.94
PACS2-208ENST00000548796 CCDC184Q52MB2 194 aa27.13■■□□□ 1.93
PACS2-208ENST00000548796 NUTM2DQ5VT03 806 aaPredicted RBP27.12■■□□□ 1.93
PACS2-208ENST00000548796 MYBBP1AQ9BQG0 1328 aaKnown RBP27.11■■□□□ 1.93
PACS2-208ENST00000548796 TRAK1Q9UPV9 953 aa27.11■■□□□ 1.93
PACS2-208ENST00000548796 TMEM132EQ6IEE7 984 aa27.1■■□□□ 1.93
PACS2-208ENST00000548796 PARD3Q8TEW0 1356 aa27.09■■□□□ 1.93
PACS2-208ENST00000548796 TNRQ92752 1358 aa27.09■■□□□ 1.93
PACS2-208ENST00000548796 QRICH2Q9H0J4 1663 aa27.09■■□□□ 1.93
PACS2-208ENST00000548796 BRD4O60885 1362 aaPredicted RBP27.07■■□□□ 1.92
PACS2-208ENST00000548796 RIMS2Q9UQ26 1411 aa27.06■■□□□ 1.92
PACS2-208ENST00000548796 MYOM1P52179 1685 aa27.06■■□□□ 1.92
PACS2-208ENST00000548796 ARHGEF28Q8N1W1 1705 aaKnown RBP27.05■■□□□ 1.92
PACS2-208ENST00000548796 CNGB1Q14028 1251 aaPredicted RBP27.05■■□□□ 1.92
PACS2-208ENST00000548796 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.05■■□□□ 1.92
PACS2-208ENST00000548796 ASXL1Q8IXJ9 1541 aa27.03■■□□□ 1.92
PACS2-208ENST00000548796 HNRNPUQ00839 825 aaKnown RBP eCLIP27.03■■□□□ 1.92
PACS2-208ENST00000548796 FAM9BQ8IZU0 186 aa27.03■■□□□ 1.92
PACS2-208ENST00000548796 ALKQ9UM73 1620 aa27.03■■□□□ 1.92
PACS2-208ENST00000548796 HDGFP51858 240 aaKnown RBP27.02■■□□□ 1.92
PACS2-208ENST00000548796 PUS7Q96PZ0 661 aaKnown RBP27.02■■□□□ 1.92
PACS2-208ENST00000548796 TMC1Q8TDI8 760 aa27.01■■□□□ 1.92
PACS2-208ENST00000548796 KNSTRNQ9Y448 316 aa27.01■■□□□ 1.92
PACS2-208ENST00000548796 NLRP13Q86W25 1043 aa26.99■■□□□ 1.91
PACS2-208ENST00000548796 NPC1L1Q9UHC9 1359 aa26.98■■□□□ 1.91
PACS2-208ENST00000548796 NLRP1Q9C000 1473 aa26.97■■□□□ 1.91
PACS2-208ENST00000548796 YTHDC2Q9H6S0 1430 aaKnown RBP26.97■■□□□ 1.91
PACS2-208ENST00000548796 EVC2Q86UK5 1308 aa26.95■■□□□ 1.91
PACS2-208ENST00000548796 FER1L4A9Z1Z3 1794 aa26.95■■□□□ 1.9
PACS2-208ENST00000548796 CC2D1BQ5T0F9 858 aaKnown RBP26.94■■□□□ 1.9
PACS2-208ENST00000548796 UBR1Q8IWV7 1749 aa26.94■■□□□ 1.9
PACS2-208ENST00000548796 PNISRQ8TF01 805 aaKnown RBP26.94■■□□□ 1.9
PACS2-208ENST00000548796 PTPRMP28827 1452 aa26.93■■□□□ 1.9
PACS2-208ENST00000548796 C3P01024 1663 aa26.92■■□□□ 1.9
PACS2-208ENST00000548796 AMER1Q5JTC6 1135 aaPredicted RBP26.91■■□□□ 1.9
PACS2-208ENST00000548796 DLC1Q96QB1 1528 aa26.91■■□□□ 1.9
PACS2-208ENST00000548796 STK26Q9P289 416 aa26.9■■□□□ 1.9
PACS2-208ENST00000548796 TMEM2Q9UHN6 1383 aa26.9■■□□□ 1.9
PACS2-208ENST00000548796 SETD1AO15047 1707 aaKnown RBP26.9■■□□□ 1.9
PACS2-208ENST00000548796 TULP4Q9NRJ4 1543 aa26.89■■□□□ 1.9
PACS2-208ENST00000548796 ZBED9Q6R2W3 1325 aa26.89■■□□□ 1.89
PACS2-208ENST00000548796 LRPPRCP42704 1394 aaKnown RBP26.88■■□□□ 1.89
PACS2-208ENST00000548796 NRXN3Q9Y4C0 1643 aa26.87■■□□□ 1.89
PACS2-208ENST00000548796 POGKQ9P215 609 aa26.86■■□□□ 1.89
PACS2-208ENST00000548796 ABCC11Q96J66 1382 aa26.84■■□□□ 1.89
PACS2-208ENST00000548796 NINLQ9Y2I6 1382 aa26.84■■□□□ 1.89
PACS2-208ENST00000548796 PRAM1Q96QH2 718 aa26.83■■□□□ 1.89
PACS2-208ENST00000548796 CEBPAP49715 358 aaPredicted RBP26.83■■□□□ 1.88
PACS2-208ENST00000548796 SENP3Q9H4L4 574 aaPredicted RBP26.83■■□□□ 1.88
PACS2-208ENST00000548796 INSRP06213 1382 aa26.81■■□□□ 1.88
PACS2-208ENST00000548796 CARD14Q9BXL6 1004 aa26.8■■□□□ 1.88
PACS2-208ENST00000548796 ATAD2Q6PL18 1390 aa26.79■■□□□ 1.88
PACS2-208ENST00000548796 PPP2R1AP30153 589 aa26.78■■□□□ 1.88
PACS2-208ENST00000548796 SAFB2Q14151 953 aaKnown RBP eCLIP26.78■■□□□ 1.88
PACS2-208ENST00000548796 PLEKHG1Q9ULL1 1385 aa26.77■■□□□ 1.88
PACS2-208ENST00000548796 USP32Q8NFA0 1604 aa26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms