RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 SMYD5Q6GMV2 418 aa11.16□□□□□ -0.62
CCDC38-206ENST00000548771 GPR37O15354 613 aa11.15□□□□□ -0.62
CCDC38-206ENST00000548771 FCHSD2O94868 740 aa11.15□□□□□ -0.62
CCDC38-206ENST00000548771 ZNF787Q6DD87 383 aa11.15□□□□□ -0.62
CCDC38-206ENST00000548771 ADGRG1Q9Y653 693 aa11.15□□□□□ -0.62
CCDC38-206ENST00000548771 HDGFP51858 240 aaKnown RBP11.13□□□□□ -0.63
CCDC38-206ENST00000548771 HIC1Q14526 733 aa11.11□□□□□ -0.63
CCDC38-206ENST00000548771 EMID1Q96A84 441 aaPredicted RBP11.1□□□□□ -0.63
CCDC38-206ENST00000548771 TRIM67Q6ZTA4 783 aa11.09□□□□□ -0.63
CCDC38-206ENST00000548771 ZNF775Q96BV0 537 aaPredicted RBP11.09□□□□□ -0.63
CCDC38-206ENST00000548771 FECHP22830 423 aa11.08□□□□□ -0.64
CCDC38-206ENST00000548771 FAM161AQ3B820 660 aa11.08□□□□□ -0.64
CCDC38-206ENST00000548771 ZPR1O75312 459 aa11.07□□□□□ -0.64
CCDC38-206ENST00000548771 RBM46Q8TBY0 533 aaKnown RBP11.07□□□□□ -0.64
CCDC38-206ENST00000548771 DNAJB2P25686 324 aa11.06□□□□□ -0.64
CCDC38-206ENST00000548771 TMEM134Q9H6X4 195 aa11.06□□□□□ -0.64
CCDC38-206ENST00000548771 RCCD1A6NED2 376 aa11.05□□□□□ -0.64
CCDC38-206ENST00000548771 GNPATO15228 680 aa11.05□□□□□ -0.64
CCDC38-206ENST00000548771 GGCXP38435 758 aa11.05□□□□□ -0.64
CCDC38-206ENST00000548771 SLF2Q8IX21 1173 aa11.05□□□□□ -0.64
CCDC38-206ENST00000548771 PXYLP1Q8TE99 480 aa11.05□□□□□ -0.64
CCDC38-206ENST00000548771 RNF223E7ERA6 249 aa11.04□□□□□ -0.64
CCDC38-206ENST00000548771 TLL1O43897 1013 aa11.04□□□□□ -0.64
CCDC38-206ENST00000548771 BLOC1S3Q6QNY0 202 aa11.04□□□□□ -0.64
CCDC38-206ENST00000548771 PPEF1O14829 653 aaPredicted RBP11.02□□□□□ -0.65
CCDC38-206ENST00000548771 OATP04181 439 aa11.02□□□□□ -0.65
CCDC38-206ENST00000548771 TMUB1Q9BVT8 246 aa11.02□□□□□ -0.65
CCDC38-206ENST00000548771 PCDHB3Q9Y5E6 796 aa11.02□□□□□ -0.65
CCDC38-206ENST00000548771 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.01□□□□□ -0.65
CCDC38-206ENST00000548771 POTECB2RU33 542 aa11.01□□□□□ -0.65
CCDC38-206ENST00000548771 SLC19A1P41440 591 aa11.01□□□□□ -0.65
CCDC38-206ENST00000548771 METTL3Q86U44 580 aaKnown RBP11.01□□□□□ -0.65
CCDC38-206ENST00000548771 NECTIN2Q92692 538 aa11.01□□□□□ -0.65
CCDC38-206ENST00000548771 GPIHBP1Q8IV16 184 aa10.99□□□□□ -0.65
CCDC38-206ENST00000548771 MYT1Q01538 1121 aa10.98□□□□□ -0.65
CCDC38-206ENST00000548771 SLC10A3P09131 477 aa10.96□□□□□ -0.65
CCDC38-206ENST00000548771 SPRYD7Q5W111 196 aa10.96□□□□□ -0.65
CCDC38-206ENST00000548771 LIAT1Q6ZQX7 453 aa10.96□□□□□ -0.65
CCDC38-206ENST00000548771 S1PR4O95977 384 aa10.95□□□□□ -0.66
CCDC38-206ENST00000548771 PKDCCQ504Y2 493 aa10.94□□□□□ -0.66
CCDC38-206ENST00000548771 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.94□□□□□ -0.66
CCDC38-206ENST00000548771 PHOX2BQ99453 314 aa10.94□□□□□ -0.66
CCDC38-206ENST00000548771 TNFRSF10AO00220 468 aa10.93□□□□□ -0.66
CCDC38-206ENST00000548771 SLC4A3P48751 1232 aa10.93□□□□□ -0.66
CCDC38-206ENST00000548771 ZNF598Q86UK7 904 aaKnown RBP10.92□□□□□ -0.66
CCDC38-206ENST00000548771 PRR14Q9BWN1 585 aa10.91□□□□□ -0.66
CCDC38-206ENST00000548771 ACTN4O43707 911 aaKnown RBP10.9□□□□□ -0.66
CCDC38-206ENST00000548771 PLA2G2CQ5R387 149 aa10.9□□□□□ -0.66
CCDC38-206ENST00000548771 ZNF697Q5TEC3 545 aa10.9□□□□□ -0.66
CCDC38-206ENST00000548771 ANKLE1Q8NAG6 615 aa10.9□□□□□ -0.66
CCDC38-206ENST00000548771 DAXXQ9UER7 740 aaPredicted RBP10.9□□□□□ -0.66
CCDC38-206ENST00000548771 FAM187AA6NFU0 413 aa10.89□□□□□ -0.67
CCDC38-206ENST00000548771 DGAT1O75907 488 aa10.89□□□□□ -0.67
CCDC38-206ENST00000548771 TULP1O00294 542 aaPredicted RBP10.88□□□□□ -0.67
CCDC38-206ENST00000548771 ST8SIA5O15466 376 aa10.88□□□□□ -0.67
CCDC38-206ENST00000548771 CFHP08603 1231 aa10.88□□□□□ -0.67
CCDC38-206ENST00000548771 GDF9O60383 454 aa10.87□□□□□ -0.67
CCDC38-206ENST00000548771 PRR20EP86478 221 aa10.87□□□□□ -0.67
CCDC38-206ENST00000548771 PRR20CP86479 221 aa10.87□□□□□ -0.67
CCDC38-206ENST00000548771 PRR20DP86480 221 aa10.87□□□□□ -0.67
CCDC38-206ENST00000548771 PRR20BP86481 221 aa10.87□□□□□ -0.67
CCDC38-206ENST00000548771 PRR20AP86496 221 aa10.87□□□□□ -0.67
CCDC38-206ENST00000548771 MAP2K5Q13163 448 aa10.87□□□□□ -0.67
CCDC38-206ENST00000548771 IRF6O14896 467 aa10.86□□□□□ -0.67
CCDC38-206ENST00000548771 NLRP7Q8WX94 980 aa10.86□□□□□ -0.67
CCDC38-206ENST00000548771 KMT5BQ4FZB7 885 aa10.85□□□□□ -0.67
CCDC38-206ENST00000548771 MINK1Q8N4C8 1332 aaPredicted RBP10.84□□□□□ -0.67
CCDC38-206ENST00000548771 ADH1BP00325 375 aa10.83□□□□□ -0.68
CCDC38-206ENST00000548771 LMOD2Q6P5Q4 547 aa10.82□□□□□ -0.68
CCDC38-206ENST00000548771 PUS10Q3MIT2 529 aaKnown RBP10.81□□□□□ -0.68
CCDC38-206ENST00000548771 AAASQ9NRG9 546 aa10.81□□□□□ -0.68
CCDC38-206ENST00000548771 RSPH4AQ5TD94 716 aa10.8□□□□□ -0.68
CCDC38-206ENST00000548771 SLC6A16Q9GZN6 736 aa10.8□□□□□ -0.68
CCDC38-206ENST00000548771 FOXC1Q12948 553 aa10.79□□□□□ -0.68
CCDC38-206ENST00000548771 DACH1Q9UI36 760 aa10.79□□□□□ -0.68
CCDC38-206ENST00000548771 DDX11L8A8MPP1 907 aa10.78□□□□□ -0.68
CCDC38-206ENST00000548771 GCGRP47871 477 aa10.78□□□□□ -0.68
CCDC38-206ENST00000548771 SCUBE3Q8IX30 993 aa10.78□□□□□ -0.68
CCDC38-206ENST00000548771 PKD2L1Q9P0L9 805 aa10.78□□□□□ -0.68
CCDC38-206ENST00000548771 NR1I2O75469 434 aa10.77□□□□□ -0.69
CCDC38-206ENST00000548771 SULF1Q8IWU6 871 aa10.77□□□□□ -0.69
CCDC38-206ENST00000548771 CCDC102AQ96A19 550 aa10.77□□□□□ -0.69
CCDC38-206ENST00000548771 ZMYND10O75800 440 aa10.76□□□□□ -0.69
CCDC38-206ENST00000548771 LCE2AQ5TA79 106 aaPredicted RBP10.76□□□□□ -0.69
CCDC38-206ENST00000548771 BARGINQ6ZT62 677 aa10.76□□□□□ -0.69
CCDC38-206ENST00000548771 RDH13Q8NBN7 331 aa10.75□□□□□ -0.69
CCDC38-206ENST00000548771 CD46P15529 392 aa10.74□□□□□ -0.69
CCDC38-206ENST00000548771 MORN1Q5T089 497 aa10.74□□□□□ -0.69
CCDC38-206ENST00000548771 TREML4Q6UXN2 200 aa10.74□□□□□ -0.69
CCDC38-206ENST00000548771 ZC3H15Q8WU90 426 aaKnown RBP10.74□□□□□ -0.69
CCDC38-206ENST00000548771 FUT2Q10981 343 aa10.73□□□□□ -0.69
CCDC38-206ENST00000548771 ATP6V1AP38606 617 aa10.72□□□□□ -0.69
CCDC38-206ENST00000548771 SPSB2Q99619 263 aa10.72□□□□□ -0.69
CCDC38-206ENST00000548771 MDM2Q00987 491 aaPredicted RBP10.71□□□□□ -0.69
CCDC38-206ENST00000548771 THAP11Q96EK4 314 aa10.71□□□□□ -0.69
CCDC38-206ENST00000548771 REPIN1Q9BWE0 567 aaKnown RBP10.69□□□□□ -0.7
CCDC38-206ENST00000548771 SALL2Q9Y467 1007 aaPredicted RBP10.69□□□□□ -0.7
CCDC38-206ENST00000548771 GMPR2Q9P2T1 348 aaKnown RBP10.68□□□□□ -0.7
CCDC38-206ENST00000548771 SLC27A5Q9Y2P5 690 aa10.68□□□□□ -0.7
CCDC38-206ENST00000548771 GPCPD1Q9NPB8 672 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms