RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 NAIPQ13075 1403 aa17.15■□□□□ 0.34
BEST3-209ENST00000548658 LRRC7Q96NW7 1537 aa17.15■□□□□ 0.34
BEST3-209ENST00000548658 KCNA6P17658 529 aa17.14■□□□□ 0.33
BEST3-209ENST00000548658 PIP4K2BP78356 416 aa17.14■□□□□ 0.33
BEST3-209ENST00000548658 SLC26A8Q96RN1 970 aa17.14■□□□□ 0.33
BEST3-209ENST00000548658 SCAF1Q9H7N4 1312 aaKnown RBP17.14■□□□□ 0.33
BEST3-209ENST00000548658 TMEM131LA2VDJ0 1609 aa17.13■□□□□ 0.33
BEST3-209ENST00000548658 HFM1A2PYH4 1435 aa17.13■□□□□ 0.33
BEST3-209ENST00000548658 ZFYVE9O95405 1425 aa17.13■□□□□ 0.33
BEST3-209ENST00000548658 RIMS2Q9UQ26 1411 aa17.13■□□□□ 0.33
BEST3-209ENST00000548658 PLEKHG1Q9ULL1 1385 aa17.12■□□□□ 0.33
BEST3-209ENST00000548658 STRCP1A6NGW2 1772 aa17.12■□□□□ 0.33
BEST3-209ENST00000548658 TRIM52Q96A61 297 aa17.1■□□□□ 0.33
BEST3-209ENST00000548658 TBX22Q9Y458 520 aa17.09■□□□□ 0.33
BEST3-209ENST00000548658 ACIN1Q9UKV3 1341 aaKnown RBP17.08■□□□□ 0.32
BEST3-209ENST00000548658 MYO5BQ9ULV0 1848 aa17.07■□□□□ 0.32
BEST3-209ENST00000548658 PROSER2Q86WR7 435 aaPredicted RBP17.07■□□□□ 0.32
BEST3-209ENST00000548658 DISP3Q9P2K9 1392 aa17.05■□□□□ 0.32
BEST3-209ENST00000548658 SPHKAPQ2M3C7 1700 aa17.05■□□□□ 0.32
BEST3-209ENST00000548658 HSPA1LP34931 641 aa17.05■□□□□ 0.32
BEST3-209ENST00000548658 SLC4A1APQ9BWU0 796 aaKnown RBP17.05■□□□□ 0.32
BEST3-209ENST00000548658 NKTRP30414 1462 aaKnown RBP17.05■□□□□ 0.32
BEST3-209ENST00000548658 TMEM94Q12767 1356 aa17.04■□□□□ 0.32
BEST3-209ENST00000548658 ZNF326Q5BKZ1 582 aaKnown RBP17.04■□□□□ 0.32
BEST3-209ENST00000548658 PIK3R4Q99570 1358 aa17.03■□□□□ 0.32
BEST3-209ENST00000548658 NUTM2DQ5VT03 806 aaPredicted RBP17.03■□□□□ 0.32
BEST3-209ENST00000548658 NWD1Q149M9 1564 aa17.01■□□□□ 0.31
BEST3-209ENST00000548658 TRPM2O94759 1503 aa17.01■□□□□ 0.31
BEST3-209ENST00000548658 ALKQ9UM73 1620 aa17■□□□□ 0.31
BEST3-209ENST00000548658 DIP2AQ14689 1571 aa17■□□□□ 0.31
BEST3-209ENST00000548658 ADAMTS13Q76LX8 1427 aa16.99■□□□□ 0.31
BEST3-209ENST00000548658 NCOA3Q9Y6Q9 1424 aa16.99■□□□□ 0.31
BEST3-209ENST00000548658 MSH6P52701 1360 aa16.99■□□□□ 0.31
BEST3-209ENST00000548658 CHD2O14647 1828 aaKnown RBP16.98■□□□□ 0.31
BEST3-209ENST00000548658 XIRP1Q702N8 1843 aaKnown RBP16.98■□□□□ 0.31
BEST3-209ENST00000548658 FAM135BQ49AJ0 1406 aa16.97■□□□□ 0.31
BEST3-209ENST00000548658 VGFO15240 615 aaPredicted RBP16.97■□□□□ 0.31
BEST3-209ENST00000548658 RPGRIP1LQ68CZ1 1315 aa16.96■□□□□ 0.31
BEST3-209ENST00000548658 RBM33Q96EV2 1170 aaKnown RBP16.96■□□□□ 0.31
BEST3-209ENST00000548658 CLTCL1P53675 1640 aa16.96■□□□□ 0.3
BEST3-209ENST00000548658 C14orf37Q86TY3 774 aa16.95■□□□□ 0.3
BEST3-209ENST00000548658 AMOTL2Q9Y2J4 779 aa16.95■□□□□ 0.3
BEST3-209ENST00000548658 KIF1BO60333 1816 aa16.95■□□□□ 0.3
BEST3-209ENST00000548658 MPHOSPH9Q99550 1183 aa16.94■□□□□ 0.3
BEST3-209ENST00000548658 C19orf44Q9H6X5 657 aa16.93■□□□□ 0.3
BEST3-209ENST00000548658 SLAIN2Q9P270 581 aa16.93■□□□□ 0.3
BEST3-209ENST00000548658 SETBP1Q9Y6X0 1596 aa16.93■□□□□ 0.3
BEST3-209ENST00000548658 SETD5Q9C0A6 1442 aa16.91■□□□□ 0.3
BEST3-209ENST00000548658 CADPS2Q86UW7 1296 aa16.91■□□□□ 0.3
BEST3-209ENST00000548658 NEXMIFQ5QGS0 1516 aa16.91■□□□□ 0.3
BEST3-209ENST00000548658 ATF3P18847 181 aa16.9■□□□□ 0.3
BEST3-209ENST00000548658 CCDC144AA2RUR9 1427 aa16.89■□□□□ 0.29
BEST3-209ENST00000548658 NRXN3Q9Y4C0 1643 aa16.87■□□□□ 0.29
BEST3-209ENST00000548658 METP08581 1390 aa16.87■□□□□ 0.29
BEST3-209ENST00000548658 PTPRUQ92729 1446 aa16.87■□□□□ 0.29
BEST3-209ENST00000548658 ILDR2Q71H61 639 aa16.86■□□□□ 0.29
BEST3-209ENST00000548658 ROBO1Q9Y6N7 1651 aa16.85■□□□□ 0.29
BEST3-209ENST00000548658 MED1Q15648 1581 aaPredicted RBP16.84■□□□□ 0.29
BEST3-209ENST00000548658 HRCP23327 699 aa16.83■□□□□ 0.28
BEST3-209ENST00000548658 DCCP43146 1447 aa16.83■□□□□ 0.28
BEST3-209ENST00000548658 ANKRD30BQ9BXX2 1392 aa16.83■□□□□ 0.28
BEST3-209ENST00000548658 XRN1Q8IZH2 1706 aaKnown RBP16.82■□□□□ 0.28
BEST3-209ENST00000548658 RAB3GAP2Q9H2M9 1393 aa16.82■□□□□ 0.28
BEST3-209ENST00000548658 RGL3Q3MIN7 710 aa16.82■□□□□ 0.28
BEST3-209ENST00000548658 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.81■□□□□ 0.28
BEST3-209ENST00000548658 SPATA31E1Q6ZUB1 1445 aa16.8■□□□□ 0.28
BEST3-209ENST00000548658 SOCS7O14512 581 aa16.8■□□□□ 0.28
BEST3-209ENST00000548658 PPLO60437 1756 aa16.79■□□□□ 0.28
BEST3-209ENST00000548658 PTCH1Q13635 1447 aa16.77■□□□□ 0.27
BEST3-209ENST00000548658 ADGRL3Q9HAR2 1447 aa16.77■□□□□ 0.27
BEST3-209ENST00000548658 JCADQ9P266 1359 aa16.77■□□□□ 0.27
BEST3-209ENST00000548658 PRAG1Q86YV5 1406 aa16.76■□□□□ 0.27
BEST3-209ENST00000548658 ADGRF5Q8IZF2 1346 aa16.75■□□□□ 0.27
BEST3-209ENST00000548658 PPP4R3CPQ6ZMV5 832 aa16.75■□□□□ 0.27
BEST3-209ENST00000548658 BRINP3Q76B58 766 aa16.75■□□□□ 0.27
BEST3-209ENST00000548658 PHLPP1O60346 1717 aa16.75■□□□□ 0.27
BEST3-209ENST00000548658 ROBO2Q9HCK4 1378 aa16.73■□□□□ 0.27
BEST3-209ENST00000548658 SETD1AO15047 1707 aaKnown RBP16.73■□□□□ 0.27
BEST3-209ENST00000548658 MST1RQ04912 1400 aa16.72■□□□□ 0.27
BEST3-209ENST00000548658 SPATA31A6Q5VVP1 1343 aa16.71■□□□□ 0.27
BEST3-209ENST00000548658 PIK3C2GO75747 1445 aa16.7■□□□□ 0.26
BEST3-209ENST00000548658 AHDC1Q5TGY3 1603 aaPredicted RBP16.7■□□□□ 0.26
BEST3-209ENST00000548658 STAC3Q96MF2 364 aa16.7■□□□□ 0.26
BEST3-209ENST00000548658 LRPPRCP42704 1394 aaKnown RBP16.69■□□□□ 0.26
BEST3-209ENST00000548658 ABCC11Q96J66 1382 aa16.69■□□□□ 0.26
BEST3-209ENST00000548658 LRRC59Q96AG4 307 aaKnown RBP16.69■□□□□ 0.26
BEST3-209ENST00000548658 C14orf93Q9H972 538 aaKnown RBP16.69■□□□□ 0.26
BEST3-209ENST00000548658 IFT172Q9UG01 1749 aa16.69■□□□□ 0.26
BEST3-209ENST00000548658 COL16A1Q07092 1604 aaPredicted RBP16.69■□□□□ 0.26
BEST3-209ENST00000548658 STK26Q9P289 416 aa16.68■□□□□ 0.26
BEST3-209ENST00000548658 ASXL1Q8IXJ9 1541 aa16.68■□□□□ 0.26
BEST3-209ENST00000548658 SIRT1Q96EB6 747 aa16.67■□□□□ 0.26
BEST3-209ENST00000548658 TECPR2O15040 1411 aa16.67■□□□□ 0.26
BEST3-209ENST00000548658 NALCNQ8IZF0 1738 aa16.67■□□□□ 0.26
BEST3-209ENST00000548658 MYOM2P54296 1465 aa16.67■□□□□ 0.26
BEST3-209ENST00000548658 TMEM132EQ6IEE7 984 aa16.66■□□□□ 0.26
BEST3-209ENST00000548658 RGS17Q9UGC6 210 aaPredicted RBP16.66■□□□□ 0.26
BEST3-209ENST00000548658 C1orf167Q5SNV9 1468 aa16.66■□□□□ 0.26
BEST3-209ENST00000548658 DHX57Q6P158 1386 aaKnown RBP16.65■□□□□ 0.26
BEST3-209ENST00000548658 MAPK8IP2Q13387 824 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms