RNA–Protein interactions for RNA: ENST00000548516.5

LETMD1-217, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-217ENST00000548516 XIRP1Q702N8 1843 aaKnown RBP14.5□□□□□ -0.09
LETMD1-217ENST00000548516 NOS1P29475 1434 aa14.49□□□□□ -0.09
LETMD1-217ENST00000548516 LMTK2Q8IWU2 1503 aa14.48□□□□□ -0.09
LETMD1-217ENST00000548516 TET3O43151 1660 aa14.47□□□□□ -0.09
LETMD1-217ENST00000548516 MEX3CQ5U5Q3 659 aaKnown RBP14.47□□□□□ -0.09
LETMD1-217ENST00000548516 ROBO1Q9Y6N7 1651 aa14.46□□□□□ -0.09
LETMD1-217ENST00000548516 RIMS2Q9UQ26 1411 aa14.46□□□□□ -0.09
LETMD1-217ENST00000548516 JCADQ9P266 1359 aa14.46□□□□□ -0.1
LETMD1-217ENST00000548516 ADGRB3O60242 1522 aa14.46□□□□□ -0.1
LETMD1-217ENST00000548516 ANKRD50Q9ULJ7 1429 aa14.45□□□□□ -0.1
LETMD1-217ENST00000548516 PLEKHG1Q9ULL1 1385 aa14.45□□□□□ -0.1
LETMD1-217ENST00000548516 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.44□□□□□ -0.1
LETMD1-217ENST00000548516 TBX22Q9Y458 520 aa14.44□□□□□ -0.1
LETMD1-217ENST00000548516 NKTRP30414 1462 aaKnown RBP14.44□□□□□ -0.1
LETMD1-217ENST00000548516 ATF3P18847 181 aa14.43□□□□□ -0.1
LETMD1-217ENST00000548516 TRIM52Q96A61 297 aa14.43□□□□□ -0.1
LETMD1-217ENST00000548516 NUTM2BA6NNL0 878 aaPredicted RBP14.41□□□□□ -0.1
LETMD1-217ENST00000548516 NUTM2EB1AL46 878 aaPredicted RBP14.41□□□□□ -0.1
LETMD1-217ENST00000548516 NUTM2AQ8IVF1 878 aaPredicted RBP14.41□□□□□ -0.1
LETMD1-217ENST00000548516 ZFYVE9O95405 1425 aa14.41□□□□□ -0.1
LETMD1-217ENST00000548516 KDM5AP29375 1690 aaKnown RBP14.4□□□□□ -0.1
LETMD1-217ENST00000548516 ITGAEP38570 1179 aa14.4□□□□□ -0.1
LETMD1-217ENST00000548516 CADPS2Q86UW7 1296 aa14.4□□□□□ -0.1
LETMD1-217ENST00000548516 C19orf44Q9H6X5 657 aa14.4□□□□□ -0.1
LETMD1-217ENST00000548516 NWD1Q149M9 1564 aa14.39□□□□□ -0.11
LETMD1-217ENST00000548516 ADGRL2O95490 1459 aa14.39□□□□□ -0.11
LETMD1-217ENST00000548516 ZNF772Q68DY9 489 aaPredicted RBP14.39□□□□□ -0.11
LETMD1-217ENST00000548516 AMOTL2Q9Y2J4 779 aa14.39□□□□□ -0.11
LETMD1-217ENST00000548516 RPRD2Q5VT52 1461 aaKnown RBP14.38□□□□□ -0.11
LETMD1-217ENST00000548516 PHLPP1O60346 1717 aa14.38□□□□□ -0.11
LETMD1-217ENST00000548516 SPATA31A6Q5VVP1 1343 aa14.38□□□□□ -0.11
LETMD1-217ENST00000548516 ADAMTS13Q76LX8 1427 aa14.35□□□□□ -0.11
LETMD1-217ENST00000548516 ZNF326Q5BKZ1 582 aaKnown RBP14.35□□□□□ -0.11
LETMD1-217ENST00000548516 NUP155O75694 1391 aa14.34□□□□□ -0.11
LETMD1-217ENST00000548516 NCOA3Q9Y6Q9 1424 aa14.34□□□□□ -0.11
LETMD1-217ENST00000548516 RXRBP28702 533 aa14.34□□□□□ -0.11
LETMD1-217ENST00000548516 BRINP3Q76B58 766 aa14.34□□□□□ -0.11
LETMD1-217ENST00000548516 UPF1Q92900 1129 aaKnown RBP eCLIP14.34□□□□□ -0.111e-8■□□□□ 9.9
LETMD1-217ENST00000548516 TMEM131LA2VDJ0 1609 aa14.33□□□□□ -0.11
LETMD1-217ENST00000548516 LRP6O75581 1613 aa14.33□□□□□ -0.11
LETMD1-217ENST00000548516 SETD1AO15047 1707 aaKnown RBP14.33□□□□□ -0.12
LETMD1-217ENST00000548516 CHD2O14647 1828 aaKnown RBP14.33□□□□□ -0.12
LETMD1-217ENST00000548516 GCC2Q8IWJ2 1684 aa14.33□□□□□ -0.12
LETMD1-217ENST00000548516 MYO5BQ9ULV0 1848 aa14.32□□□□□ -0.12
LETMD1-217ENST00000548516 PPARGC1BQ86YN6 1023 aaKnown RBP14.32□□□□□ -0.12
LETMD1-217ENST00000548516 PIK3R4Q99570 1358 aa14.32□□□□□ -0.12
LETMD1-217ENST00000548516 COL16A1Q07092 1604 aaPredicted RBP14.31□□□□□ -0.12
LETMD1-217ENST00000548516 PTPRUQ92729 1446 aa14.31□□□□□ -0.12
LETMD1-217ENST00000548516 DDX17Q92841 729 aaKnown RBP14.3□□□□□ -0.12
LETMD1-217ENST00000548516 AFF2P51816 1311 aa14.29□□□□□ -0.12
LETMD1-217ENST00000548516 C8orf37Q96NL8 207 aa14.28□□□□□ -0.12
LETMD1-217ENST00000548516 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.28□□□□□ -0.12
LETMD1-217ENST00000548516 LRRC59Q96AG4 307 aaKnown RBP14.27□□□□□ -0.13
LETMD1-217ENST00000548516 TRPM2O94759 1503 aa14.26□□□□□ -0.13
LETMD1-217ENST00000548516 ROCK1Q13464 1354 aa14.26□□□□□ -0.13
LETMD1-217ENST00000548516 E9PCH4 1651 aa14.26□□□□□ -0.13
LETMD1-217ENST00000548516 AHDC1Q5TGY3 1603 aaPredicted RBP14.26□□□□□ -0.13
LETMD1-217ENST00000548516 UNC13BO14795 1591 aa14.26□□□□□ -0.13
LETMD1-217ENST00000548516 ADAMTS2O95450 1211 aa14.25□□□□□ -0.13
LETMD1-217ENST00000548516 QTRT2Q9H974 415 aaKnown RBP14.25□□□□□ -0.13
LETMD1-217ENST00000548516 DIP2AQ14689 1571 aa14.25□□□□□ -0.13
LETMD1-217ENST00000548516 METP08581 1390 aa14.24□□□□□ -0.13
LETMD1-217ENST00000548516 NGLY1Q96IV0 654 aa14.24□□□□□ -0.13
LETMD1-217ENST00000548516 RBM6P78332 1123 aaKnown RBP14.22□□□□□ -0.13
LETMD1-217ENST00000548516 MST1RQ04912 1400 aa14.22□□□□□ -0.13
LETMD1-217ENST00000548516 ASXL1Q8IXJ9 1541 aa14.21□□□□□ -0.13
LETMD1-217ENST00000548516 IQGAP3Q86VI3 1631 aa14.21□□□□□ -0.13
LETMD1-217ENST00000548516 DCCP43146 1447 aa14.21□□□□□ -0.13
LETMD1-217ENST00000548516 SETD5Q9C0A6 1442 aa14.21□□□□□ -0.13
LETMD1-217ENST00000548516 SHPRHQ149N8 1683 aa14.2□□□□□ -0.14
LETMD1-217ENST00000548516 ORAI2Q96SN7 254 aa14.19□□□□□ -0.14
LETMD1-217ENST00000548516 PNPLA6Q8IY17 1366 aa14.19□□□□□ -0.14
LETMD1-217ENST00000548516 ADGRL3Q9HAR2 1447 aa14.17□□□□□ -0.14
LETMD1-217ENST00000548516 USP21Q9UK80 565 aa14.16□□□□□ -0.14
LETMD1-217ENST00000548516 CDK12Q9NYV4 1490 aaPredicted RBP14.16□□□□□ -0.14
LETMD1-217ENST00000548516 SETBP1Q9Y6X0 1596 aa14.16□□□□□ -0.14
LETMD1-217ENST00000548516 RGS12O14924 1447 aa14.15□□□□□ -0.14
LETMD1-217ENST00000548516 VGFO15240 615 aaPredicted RBP14.15□□□□□ -0.14
LETMD1-217ENST00000548516 NRXN3Q9Y4C0 1643 aa14.15□□□□□ -0.14
LETMD1-217ENST00000548516 C1orf167Q5SNV9 1468 aa14.14□□□□□ -0.15
LETMD1-217ENST00000548516 XRN1Q8IZH2 1706 aaKnown RBP14.14□□□□□ -0.15
LETMD1-217ENST00000548516 TRPC5Q9UL62 973 aaPredicted RBP14.13□□□□□ -0.15
LETMD1-217ENST00000548516 ROBO2Q9HCK4 1378 aa14.12□□□□□ -0.15
LETMD1-217ENST00000548516 ESCO1Q5FWF5 840 aa14.12□□□□□ -0.15
LETMD1-217ENST00000548516 SOS2Q07890 1332 aaPredicted RBP14.12□□□□□ -0.15
LETMD1-217ENST00000548516 NUTM2FA1L443 756 aa14.11□□□□□ -0.15
LETMD1-217ENST00000548516 XPCQ01831 940 aaPredicted RBP14.11□□□□□ -0.15
LETMD1-217ENST00000548516 NHSL1Q5SYE7 1610 aa14.11□□□□□ -0.15
LETMD1-217ENST00000548516 SPHKAPQ2M3C7 1700 aa14.1□□□□□ -0.15
LETMD1-217ENST00000548516 SLC4A1APQ9BWU0 796 aaKnown RBP14.1□□□□□ -0.15
LETMD1-217ENST00000548516 STK26Q9P289 416 aa14.1□□□□□ -0.15
LETMD1-217ENST00000548516 NEXMIFQ5QGS0 1516 aa14.1□□□□□ -0.15
LETMD1-217ENST00000548516 ATAD2Q6PL18 1390 aa14.09□□□□□ -0.15
LETMD1-217ENST00000548516 CLTCL1P53675 1640 aa14.08□□□□□ -0.15
LETMD1-217ENST00000548516 FOXO3O43524 673 aa14.08□□□□□ -0.16
LETMD1-217ENST00000548516 FNBP4Q8N3X1 1017 aaPredicted RBP14.08□□□□□ -0.16
LETMD1-217ENST00000548516 FOXD1Q16676 465 aa14.07□□□□□ -0.16
LETMD1-217ENST00000548516 RPGRIP1LQ68CZ1 1315 aa14.07□□□□□ -0.16
LETMD1-217ENST00000548516 NALCNQ8IZF0 1738 aa14.07□□□□□ -0.16
LETMD1-217ENST00000548516 PLEKHG5O94827 1062 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms