RNA–Protein interactions for RNA: ENST00000548422.1

CDK17-204, Transcript of cyclin dependent kinase 17, humanhuman

TSL 3

Gene CDK17, Length 892 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK17-204ENST00000548422 TNIKQ9UKE5 1360 aa11.46□□□□□ -0.57
CDK17-204ENST00000548422 FOXK1P85037 733 aa11.46□□□□□ -0.57
CDK17-204ENST00000548422 CERKQ8TCT0 537 aa11.46□□□□□ -0.57
CDK17-204ENST00000548422 AAMPQ13685 434 aa11.45□□□□□ -0.58
CDK17-204ENST00000548422 DSG2Q14126 1118 aa11.45□□□□□ -0.58
CDK17-204ENST00000548422 PPP1R15BQ5SWA1 713 aa11.45□□□□□ -0.58
CDK17-204ENST00000548422 PCF11O94913 1555 aaKnown RBP11.45□□□□□ -0.58
CDK17-204ENST00000548422 PTPRMP28827 1452 aa11.44□□□□□ -0.58
CDK17-204ENST00000548422 HOXB3P14651 431 aaPredicted RBP11.44□□□□□ -0.58
CDK17-204ENST00000548422 PLPP6Q8IY26 295 aa11.44□□□□□ -0.58
CDK17-204ENST00000548422 VSIG10Q8N0Z9 540 aa11.44□□□□□ -0.58
CDK17-204ENST00000548422 BIVM-ERCC5R4GMW8 1640 aa11.44□□□□□ -0.58
CDK17-204ENST00000548422 CUL7Q14999 1698 aa11.43□□□□□ -0.58
CDK17-204ENST00000548422 MFSD10Q14728 455 aa11.42□□□□□ -0.58
CDK17-204ENST00000548422 UACAQ9BZF9 1416 aa11.42□□□□□ -0.58
CDK17-204ENST00000548422 WASHC2CQ9Y4E1 1318 aa11.41□□□□□ -0.58
CDK17-204ENST00000548422 HOMEZQ8IX15 550 aa11.41□□□□□ -0.58
CDK17-204ENST00000548422 SPATA31D1Q6ZQQ2 1576 aa11.41□□□□□ -0.58
CDK17-204ENST00000548422 SUPT5HO00267 1087 aaKnown RBP11.4□□□□□ -0.58
CDK17-204ENST00000548422 RTL5Q5HYW3 569 aaPredicted RBP11.4□□□□□ -0.58
CDK17-204ENST00000548422 MAGI3Q5TCQ9 1506 aa11.4□□□□□ -0.59
CDK17-204ENST00000548422 KDM5BQ9UGL1 1544 aa11.4□□□□□ -0.59
CDK17-204ENST00000548422 KIF21BO75037 1637 aa11.39□□□□□ -0.59
CDK17-204ENST00000548422 DOK7Q18PE1 504 aa11.39□□□□□ -0.59
CDK17-204ENST00000548422 ERBB3P21860 1342 aa11.38□□□□□ -0.59
CDK17-204ENST00000548422 WASHC2AQ641Q2 1341 aa11.38□□□□□ -0.59
CDK17-204ENST00000548422 RRP9O43818 475 aaKnown RBP11.38□□□□□ -0.59
CDK17-204ENST00000548422 HOXB1P14653 301 aaPredicted RBP11.38□□□□□ -0.59
CDK17-204ENST00000548422 ADAMTSL3P82987 1691 aa11.37□□□□□ -0.59
CDK17-204ENST00000548422 ZNF710Q8N1W2 664 aa11.37□□□□□ -0.59
CDK17-204ENST00000548422 CDK11AQ9UQ88 783 aaPredicted RBP11.37□□□□□ -0.59
CDK17-204ENST00000548422 KDM2AQ9Y2K7 1162 aa11.37□□□□□ -0.59
CDK17-204ENST00000548422 RIMBP2O15034 1052 aa11.36□□□□□ -0.59
CDK17-204ENST00000548422 CD109Q6YHK3 1445 aa11.35□□□□□ -0.59
CDK17-204ENST00000548422 LOC105371045A0A1W2PR82 267 aa11.35□□□□□ -0.59
CDK17-204ENST00000548422 WDR7Q9Y4E6 1490 aa11.35□□□□□ -0.59
CDK17-204ENST00000548422 CFAP43Q8NDM7 1665 aa11.34□□□□□ -0.59
CDK17-204ENST00000548422 E2F4Q16254 413 aa11.34□□□□□ -0.59
CDK17-204ENST00000548422 NOP58Q9Y2X3 529 aaKnown RBP11.34□□□□□ -0.59
CDK17-204ENST00000548422 RBM10P98175 930 aaKnown RBP11.33□□□□□ -0.6
CDK17-204ENST00000548422 ZCCHC11Q5TAX3 1644 aaKnown RBP11.33□□□□□ -0.6
CDK17-204ENST00000548422 ARAP3Q8WWN8 1544 aa11.33□□□□□ -0.6
CDK17-204ENST00000548422 PHLDB1Q86UU1 1377 aa11.32□□□□□ -0.6
CDK17-204ENST00000548422 FAM43AQ8N2R8 423 aa11.32□□□□□ -0.6
CDK17-204ENST00000548422 TBC1D12O60347 775 aa11.31□□□□□ -0.6
CDK17-204ENST00000548422 VARS2Q5ST30 1063 aaKnown RBP11.31□□□□□ -0.6
CDK17-204ENST00000548422 RSPH4AQ5TD94 716 aa11.31□□□□□ -0.6
CDK17-204ENST00000548422 IL27Q8NEV9 243 aa11.31□□□□□ -0.6
CDK17-204ENST00000548422 UPF1Q92900 1129 aaKnown RBP eCLIP11.31□□□□□ -0.6
CDK17-204ENST00000548422 CENPJQ9HC77 1338 aaPredicted RBP11.31□□□□□ -0.6
CDK17-204ENST00000548422 SLC34A2O95436 690 aa11.3□□□□□ -0.6
CDK17-204ENST00000548422 BCORL1Q5H9F3 1711 aa11.29□□□□□ -0.6
CDK17-204ENST00000548422 IGF1RP08069 1367 aa11.28□□□□□ -0.6
CDK17-204ENST00000548422 IQGAP2Q13576 1575 aa11.28□□□□□ -0.6
CDK17-204ENST00000548422 MAP3K9P80192 1104 aa11.28□□□□□ -0.6
CDK17-204ENST00000548422 CAMK2BQ13554 666 aa11.28□□□□□ -0.6
CDK17-204ENST00000548422 P3H3Q8IVL6 736 aa11.28□□□□□ -0.6
CDK17-204ENST00000548422 ARID4BQ4LE39 1312 aaPredicted RBP11.28□□□□□ -0.6
CDK17-204ENST00000548422 HSPA2P54652 639 aa11.27□□□□□ -0.61
CDK17-204ENST00000548422 PTCD2Q8WV60 388 aaKnown RBP11.27□□□□□ -0.61
CDK17-204ENST00000548422 ZSWIM6Q9HCJ5 1215 aa11.27□□□□□ -0.61
CDK17-204ENST00000548422 MADDQ8WXG6 1647 aa11.27□□□□□ -0.61
CDK17-204ENST00000548422 NCLP19338 710 aaKnown RBP11.26□□□□□ -0.61
CDK17-204ENST00000548422 BRD2P25440 801 aaKnown RBP11.26□□□□□ -0.61
CDK17-204ENST00000548422 EMILIN3Q9NT22 766 aa11.26□□□□□ -0.61
CDK17-204ENST00000548422 PCDHGA4Q9Y5G9 962 aa11.26□□□□□ -0.61
CDK17-204ENST00000548422 KIF27Q86VH2 1401 aa11.26□□□□□ -0.61
CDK17-204ENST00000548422 OXER1Q8TDS5 423 aa11.25□□□□□ -0.61
CDK17-204ENST00000548422 ARSIQ5FYB1 569 aa11.24□□□□□ -0.61
CDK17-204ENST00000548422 KCNH8Q96L42 1107 aa11.24□□□□□ -0.61
CDK17-204ENST00000548422 DISP1Q96F81 1524 aa11.24□□□□□ -0.61
CDK17-204ENST00000548422 POGZQ7Z3K3 1410 aa11.23□□□□□ -0.61
CDK17-204ENST00000548422 DPYSL4O14531 572 aa11.22□□□□□ -0.61
CDK17-204ENST00000548422 ZNF687Q8N1G0 1237 aa11.22□□□□□ -0.61
CDK17-204ENST00000548422 KCNV2Q8TDN2 545 aa11.22□□□□□ -0.61
CDK17-204ENST00000548422 RIMS1Q86UR5 1692 aaKnown RBP11.21□□□□□ -0.61
CDK17-204ENST00000548422 CARMIL1Q5VZK9 1371 aa11.21□□□□□ -0.61
CDK17-204ENST00000548422 CALD1Q05682 793 aaKnown RBP11.21□□□□□ -0.61
CDK17-204ENST00000548422 GPR153Q6NV75 609 aa11.21□□□□□ -0.61
CDK17-204ENST00000548422 ARHGEF1Q92888 912 aaKnown RBP11.21□□□□□ -0.61
CDK17-204ENST00000548422 IQSEC2Q5JU85 1478 aa11.2□□□□□ -0.62
CDK17-204ENST00000548422 YEATS2Q9ULM3 1422 aa11.2□□□□□ -0.62
CDK17-204ENST00000548422 KHSRPQ92945 711 aaKnown RBP eCLIP11.2□□□□□ -0.62
CDK17-204ENST00000548422 NUDT7P0C024 238 aa11.19□□□□□ -0.62
CDK17-204ENST00000548422 PTGER2P43116 358 aa11.19□□□□□ -0.62
CDK17-204ENST00000548422 HSP90AA2PQ14568 343 aaPredicted RBP11.19□□□□□ -0.62
CDK17-204ENST00000548422 UGGT2Q9NYU1 1516 aa11.19□□□□□ -0.62
CDK17-204ENST00000548422 PPM1GO15355 546 aaPredicted RBP11.18□□□□□ -0.62
CDK17-204ENST00000548422 NEO1Q92859 1461 aa11.18□□□□□ -0.62
CDK17-204ENST00000548422 EVI5O60447 810 aa11.17□□□□□ -0.62
CDK17-204ENST00000548422 TIMELESSQ9UNS1 1208 aa11.17□□□□□ -0.62
CDK17-204ENST00000548422 RAPGEF3O95398 923 aa11.16□□□□□ -0.62
CDK17-204ENST00000548422 ARIH1Q9Y4X5 557 aaPredicted RBP11.16□□□□□ -0.62
CDK17-204ENST00000548422 FANCAO15360 1455 aa11.16□□□□□ -0.62
CDK17-204ENST00000548422 KIAA0556O60303 1618 aa11.16□□□□□ -0.62
CDK17-204ENST00000548422 BCCIPQ9P287 314 aaKnown RBP eCLIP11.15□□□□□ -0.62
CDK17-204ENST00000548422 SPDYE16A6NNV3 312 aaPredicted RBP11.14□□□□□ -0.63
CDK17-204ENST00000548422 IPO9Q96P70 1041 aaKnown RBP11.14□□□□□ -0.63
CDK17-204ENST00000548422 ARHGEF40Q8TER5 1519 aa11.14□□□□□ -0.63
CDK17-204ENST00000548422 PTPRTO14522 1441 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms