RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 ADGRB3O60242 1522 aa18.52■□□□□ 0.56
TRAFD1-205ENST00000548277 FAM135BQ49AJ0 1406 aa18.51■□□□□ 0.55
TRAFD1-205ENST00000548277 PPP1R15AO75807 674 aaPredicted RBP18.51■□□□□ 0.55
TRAFD1-205ENST00000548277 SLC52A1Q9NWF4 448 aa18.51■□□□□ 0.55
TRAFD1-205ENST00000548277 ANKRD50Q9ULJ7 1429 aa18.49■□□□□ 0.55
TRAFD1-205ENST00000548277 CHD2O14647 1828 aaKnown RBP18.49■□□□□ 0.55
TRAFD1-205ENST00000548277 ADGRL2O95490 1459 aa18.47■□□□□ 0.55
TRAFD1-205ENST00000548277 POTEAQ6S8J7 498 aa18.47■□□□□ 0.55
TRAFD1-205ENST00000548277 MSH6P52701 1360 aa18.46■□□□□ 0.55
TRAFD1-205ENST00000548277 SLAIN2Q9P270 581 aa18.46■□□□□ 0.55
TRAFD1-205ENST00000548277 PHLPP1O60346 1717 aa18.46■□□□□ 0.55
TRAFD1-205ENST00000548277 ITGAEP38570 1179 aa18.45■□□□□ 0.54
TRAFD1-205ENST00000548277 HDGFP51858 240 aaKnown RBP18.45■□□□□ 0.54
TRAFD1-205ENST00000548277 RIMS2Q9UQ26 1411 aa18.45■□□□□ 0.54
TRAFD1-205ENST00000548277 C14orf37Q86TY3 774 aa18.44■□□□□ 0.54
TRAFD1-205ENST00000548277 PPARGC1BQ86YN6 1023 aaKnown RBP18.44■□□□□ 0.54
TRAFD1-205ENST00000548277 TMEM131LA2VDJ0 1609 aa18.44■□□□□ 0.54
TRAFD1-205ENST00000548277 NWD1Q149M9 1564 aa18.42■□□□□ 0.54
TRAFD1-205ENST00000548277 E9PCH4 1651 aa18.42■□□□□ 0.54
TRAFD1-205ENST00000548277 PLEKHG1Q9ULL1 1385 aa18.42■□□□□ 0.54
TRAFD1-205ENST00000548277 ZFYVE9O95405 1425 aa18.41■□□□□ 0.54
TRAFD1-205ENST00000548277 NKTRP30414 1462 aaKnown RBP18.41■□□□□ 0.54
TRAFD1-205ENST00000548277 RPRD2Q5VT52 1461 aaKnown RBP18.41■□□□□ 0.54
TRAFD1-205ENST00000548277 TBX22Q9Y458 520 aa18.39■□□□□ 0.53
TRAFD1-205ENST00000548277 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.38■□□□□ 0.53
TRAFD1-205ENST00000548277 UNC13BO14795 1591 aa18.38■□□□□ 0.53
TRAFD1-205ENST00000548277 SETD1AO15047 1707 aaKnown RBP18.36■□□□□ 0.53
TRAFD1-205ENST00000548277 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.35■□□□□ 0.53
TRAFD1-205ENST00000548277 NUP155O75694 1391 aa18.34■□□□□ 0.53
TRAFD1-205ENST00000548277 JCADQ9P266 1359 aa18.34■□□□□ 0.53
TRAFD1-205ENST00000548277 ATF3P18847 181 aa18.33■□□□□ 0.52
TRAFD1-205ENST00000548277 MEX3CQ5U5Q3 659 aaKnown RBP18.33■□□□□ 0.52
TRAFD1-205ENST00000548277 AMOTL2Q9Y2J4 779 aa18.33■□□□□ 0.52
TRAFD1-205ENST00000548277 ADAMTS13Q76LX8 1427 aa18.32■□□□□ 0.52
TRAFD1-205ENST00000548277 IQGAP3Q86VI3 1631 aa18.32■□□□□ 0.52
TRAFD1-205ENST00000548277 C19orf44Q9H6X5 657 aa18.31■□□□□ 0.52
TRAFD1-205ENST00000548277 COL16A1Q07092 1604 aaPredicted RBP18.31■□□□□ 0.52
TRAFD1-205ENST00000548277 ZNF326Q5BKZ1 582 aaKnown RBP18.3■□□□□ 0.52
TRAFD1-205ENST00000548277 CADPS2Q86UW7 1296 aa18.3■□□□□ 0.52
TRAFD1-205ENST00000548277 NUTM2BA6NNL0 878 aaPredicted RBP18.29■□□□□ 0.52
TRAFD1-205ENST00000548277 NUTM2EB1AL46 878 aaPredicted RBP18.29■□□□□ 0.52
TRAFD1-205ENST00000548277 NUTM2AQ8IVF1 878 aaPredicted RBP18.29■□□□□ 0.52
TRAFD1-205ENST00000548277 PTPRUQ92729 1446 aa18.28■□□□□ 0.52
TRAFD1-205ENST00000548277 ROCK1Q13464 1354 aa18.28■□□□□ 0.52
TRAFD1-205ENST00000548277 TRIM52Q96A61 297 aa18.27■□□□□ 0.52
TRAFD1-205ENST00000548277 NCOA3Q9Y6Q9 1424 aa18.26■□□□□ 0.51
TRAFD1-205ENST00000548277 TRPM2O94759 1503 aa18.26■□□□□ 0.51
TRAFD1-205ENST00000548277 LRP6O75581 1613 aa18.26■□□□□ 0.51
TRAFD1-205ENST00000548277 SPHKAPQ2M3C7 1700 aa18.26■□□□□ 0.51
TRAFD1-205ENST00000548277 DIP2AQ14689 1571 aa18.25■□□□□ 0.51
TRAFD1-205ENST00000548277 BRINP3Q76B58 766 aa18.24■□□□□ 0.51
TRAFD1-205ENST00000548277 PIK3R4Q99570 1358 aa18.24■□□□□ 0.51
TRAFD1-205ENST00000548277 SPATA31A6Q5VVP1 1343 aa18.23■□□□□ 0.51
TRAFD1-205ENST00000548277 NRXN3Q9Y4C0 1643 aa18.22■□□□□ 0.51
TRAFD1-205ENST00000548277 SHPRHQ149N8 1683 aa18.22■□□□□ 0.51
TRAFD1-205ENST00000548277 AHDC1Q5TGY3 1603 aaPredicted RBP18.21■□□□□ 0.51
TRAFD1-205ENST00000548277 ZNF772Q68DY9 489 aaPredicted RBP18.21■□□□□ 0.51
TRAFD1-205ENST00000548277 DDX17Q92841 729 aaKnown RBP18.21■□□□□ 0.51
TRAFD1-205ENST00000548277 KIF1BO60333 1816 aa18.19■□□□□ 0.5
TRAFD1-205ENST00000548277 METP08581 1390 aa18.18■□□□□ 0.5
TRAFD1-205ENST00000548277 XRN1Q8IZH2 1706 aaKnown RBP18.17■□□□□ 0.5
TRAFD1-205ENST00000548277 RXRBP28702 533 aa18.16■□□□□ 0.5
TRAFD1-205ENST00000548277 CLTCL1P53675 1640 aa18.16■□□□□ 0.5
TRAFD1-205ENST00000548277 SETBP1Q9Y6X0 1596 aa18.15■□□□□ 0.5
TRAFD1-205ENST00000548277 ASXL1Q8IXJ9 1541 aa18.14■□□□□ 0.49
TRAFD1-205ENST00000548277 UPF1Q92900 1129 aaKnown RBP eCLIP18.14■□□□□ 0.49
TRAFD1-205ENST00000548277 AFF2P51816 1311 aa18.14■□□□□ 0.49
TRAFD1-205ENST00000548277 MST1RQ04912 1400 aa18.14■□□□□ 0.49
TRAFD1-205ENST00000548277 NALCNQ8IZF0 1738 aa18.12■□□□□ 0.49
TRAFD1-205ENST00000548277 LRRC59Q96AG4 307 aaKnown RBP18.12■□□□□ 0.49
TRAFD1-205ENST00000548277 C8orf37Q96NL8 207 aa18.12■□□□□ 0.49
TRAFD1-205ENST00000548277 NHSL1Q5SYE7 1610 aa18.12■□□□□ 0.49
TRAFD1-205ENST00000548277 NEXMIFQ5QGS0 1516 aa18.11■□□□□ 0.49
TRAFD1-205ENST00000548277 DCCP43146 1447 aa18.1■□□□□ 0.49
TRAFD1-205ENST00000548277 ADAMTS2O95450 1211 aa18.09■□□□□ 0.49
TRAFD1-205ENST00000548277 SETD5Q9C0A6 1442 aa18.08■□□□□ 0.49
TRAFD1-205ENST00000548277 QTRT2Q9H974 415 aaKnown RBP18.08■□□□□ 0.48
TRAFD1-205ENST00000548277 ADGRL3Q9HAR2 1447 aa18.07■□□□□ 0.48
TRAFD1-205ENST00000548277 ORAI2Q96SN7 254 aa18.07■□□□□ 0.48
TRAFD1-205ENST00000548277 NGLY1Q96IV0 654 aa18.06■□□□□ 0.48
TRAFD1-205ENST00000548277 VGFO15240 615 aaPredicted RBP18.05■□□□□ 0.48
TRAFD1-205ENST00000548277 NAIPQ13075 1403 aa18.05■□□□□ 0.48
TRAFD1-205ENST00000548277 PNPLA6Q8IY17 1366 aa18.04■□□□□ 0.48
TRAFD1-205ENST00000548277 SLC4A1APQ9BWU0 796 aaKnown RBP18.04■□□□□ 0.48
TRAFD1-205ENST00000548277 C1orf167Q5SNV9 1468 aa18.03■□□□□ 0.48
TRAFD1-205ENST00000548277 FOXD1Q16676 465 aa18.03■□□□□ 0.48
TRAFD1-205ENST00000548277 ROBO2Q9HCK4 1378 aa18.03■□□□□ 0.48
TRAFD1-205ENST00000548277 PPLO60437 1756 aa18.02■□□□□ 0.47
TRAFD1-205ENST00000548277 RBM6P78332 1123 aaKnown RBP18.01■□□□□ 0.47
TRAFD1-205ENST00000548277 RRBP1Q9P2E9 1410 aaKnown RBP18■□□□□ 0.47
TRAFD1-205ENST00000548277 NUTM2FA1L443 756 aa17.99■□□□□ 0.47
TRAFD1-205ENST00000548277 RGL3Q3MIN7 710 aa17.98■□□□□ 0.47
TRAFD1-205ENST00000548277 ESCO1Q5FWF5 840 aa17.98■□□□□ 0.47
TRAFD1-205ENST00000548277 STK26Q9P289 416 aa17.98■□□□□ 0.47
TRAFD1-205ENST00000548277 RGS12O14924 1447 aa17.98■□□□□ 0.47
TRAFD1-205ENST00000548277 CDK12Q9NYV4 1490 aaPredicted RBP17.97■□□□□ 0.47
TRAFD1-205ENST00000548277 XPCQ01831 940 aaPredicted RBP17.97■□□□□ 0.47
TRAFD1-205ENST00000548277 USP21Q9UK80 565 aa17.97■□□□□ 0.47
TRAFD1-205ENST00000548277 RPGRIP1LQ68CZ1 1315 aa17.97■□□□□ 0.47
TRAFD1-205ENST00000548277 SOS2Q07890 1332 aaPredicted RBP17.96■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms