RNA–Protein interactions for RNA: ENST00000548021.5

CNOT2-208, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 724 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-208ENST00000548021 YEATS2Q9ULM3 1422 aa11.84□□□□□ -0.51
CNOT2-208ENST00000548021 PIK3C2BO00750 1634 aa11.83□□□□□ -0.52
CNOT2-208ENST00000548021 PPLO60437 1756 aa11.83□□□□□ -0.52
CNOT2-208ENST00000548021 NPATQ14207 1427 aa11.83□□□□□ -0.52
CNOT2-208ENST00000548021 RAPGEF3O95398 923 aa11.82□□□□□ -0.52
CNOT2-208ENST00000548021 NBPF1Q3BBV0 1214 aa11.82□□□□□ -0.52
CNOT2-208ENST00000548021 SYNMO15061 1565 aa11.82□□□□□ -0.52
CNOT2-208ENST00000548021 CFAP65Q6ZU64 1925 aaKnown RBP11.82□□□□□ -0.52
CNOT2-208ENST00000548021 REREQ9P2R6 1566 aa11.81□□□□□ -0.52
CNOT2-208ENST00000548021 ST20-MTHFSA0A0A6YYL1 179 aa11.81□□□□□ -0.52
CNOT2-208ENST00000548021 NRXN1Q9ULB1 1477 aa11.8□□□□□ -0.52
CNOT2-208ENST00000548021 PRKRIP1Q9H875 184 aaPredicted RBP11.79□□□□□ -0.52
CNOT2-208ENST00000548021 NOS1P29475 1434 aa11.78□□□□□ -0.52
CNOT2-208ENST00000548021 PREX1Q8TCU6 1659 aa11.78□□□□□ -0.52
CNOT2-208ENST00000548021 ARHGAP31Q2M1Z3 1444 aa11.77□□□□□ -0.52
CNOT2-208ENST00000548021 FAM69CQ0P6D2 419 aa11.77□□□□□ -0.53
CNOT2-208ENST00000548021 MYO3AQ8NEV4 1616 aa11.77□□□□□ -0.53
CNOT2-208ENST00000548021 MYOM1P52179 1685 aa11.77□□□□□ -0.53
CNOT2-208ENST00000548021 DISP3Q9P2K9 1392 aa11.77□□□□□ -0.53
CNOT2-208ENST00000548021 SCAF11Q99590 1463 aaKnown RBP11.76□□□□□ -0.53
CNOT2-208ENST00000548021 ARHGEF40Q8TER5 1519 aa11.76□□□□□ -0.53
CNOT2-208ENST00000548021 STAC3Q96MF2 364 aa11.76□□□□□ -0.53
CNOT2-208ENST00000548021 TESK2Q96S53 571 aa11.76□□□□□ -0.53
CNOT2-208ENST00000548021 AGLP35573 1532 aa11.76□□□□□ -0.53
CNOT2-208ENST00000548021 MYO5BQ9ULV0 1848 aa11.75□□□□□ -0.53
CNOT2-208ENST00000548021 CCDC184Q52MB2 194 aa11.75□□□□□ -0.53
CNOT2-208ENST00000548021 SETBP1Q9Y6X0 1596 aa11.75□□□□□ -0.53
CNOT2-208ENST00000548021 GGT6Q6P531 493 aa11.74□□□□□ -0.53
CNOT2-208ENST00000548021 POLR3GLQ9BT43 218 aa11.74□□□□□ -0.53
CNOT2-208ENST00000548021 NEXMIFQ5QGS0 1516 aa11.74□□□□□ -0.53
CNOT2-208ENST00000548021 KDM5AP29375 1690 aaKnown RBP11.71□□□□□ -0.53
CNOT2-208ENST00000548021 CLTCQ00610 1675 aaKnown RBP11.71□□□□□ -0.53
CNOT2-208ENST00000548021 ADGRF5Q8IZF2 1346 aa11.71□□□□□ -0.53
CNOT2-208ENST00000548021 WASHC2CQ9Y4E1 1318 aa11.71□□□□□ -0.53
CNOT2-208ENST00000548021 ADGRB1O14514 1584 aa11.71□□□□□ -0.54
CNOT2-208ENST00000548021 PIK3C2GO75747 1445 aa11.7□□□□□ -0.54
CNOT2-208ENST00000548021 TMEM131LA2VDJ0 1609 aa11.7□□□□□ -0.54
CNOT2-208ENST00000548021 QRICH2Q9H0J4 1663 aa11.69□□□□□ -0.54
CNOT2-208ENST00000548021 MRS2Q9HD23 443 aa11.68□□□□□ -0.54
CNOT2-208ENST00000548021 ARHGEF28Q8N1W1 1705 aaKnown RBP11.68□□□□□ -0.54
CNOT2-208ENST00000548021 ERVK-7P63135 1459 aa11.68□□□□□ -0.54
CNOT2-208ENST00000548021 EIF3AQ14152 1382 aaKnown RBP11.67□□□□□ -0.54
CNOT2-208ENST00000548021 KTN1Q86UP2 1357 aaKnown RBP11.67□□□□□ -0.54
CNOT2-208ENST00000548021 TMF1P82094 1093 aa11.67□□□□□ -0.54
CNOT2-208ENST00000548021 PARD3Q8TEW0 1356 aa11.67□□□□□ -0.54
CNOT2-208ENST00000548021 RPGRIP1LQ68CZ1 1315 aa11.66□□□□□ -0.54
CNOT2-208ENST00000548021 HNRNPUQ00839 825 aaKnown RBP eCLIP11.66□□□□□ -0.54
CNOT2-208ENST00000548021 CFAP70Q5T0N1 1121 aa11.66□□□□□ -0.54
CNOT2-208ENST00000548021 SPATA31D1Q6ZQQ2 1576 aa11.66□□□□□ -0.54
CNOT2-208ENST00000548021 ASXL1Q8IXJ9 1541 aa11.65□□□□□ -0.54
CNOT2-208ENST00000548021 PER1O15534 1290 aaPredicted RBP11.64□□□□□ -0.55
CNOT2-208ENST00000548021 CHGAP10645 457 aaKnown RBP11.64□□□□□ -0.55
CNOT2-208ENST00000548021 SBNO2Q9Y2G9 1366 aa11.64□□□□□ -0.55
CNOT2-208ENST00000548021 MYBBP1AQ9BQG0 1328 aaKnown RBP11.63□□□□□ -0.55
CNOT2-208ENST00000548021 ZFYVE9O95405 1425 aa11.63□□□□□ -0.55
CNOT2-208ENST00000548021 BRD4O60885 1362 aaPredicted RBP11.63□□□□□ -0.55
CNOT2-208ENST00000548021 RALBP1Q15311 655 aa11.62□□□□□ -0.55
CNOT2-208ENST00000548021 FAM9BQ8IZU0 186 aa11.62□□□□□ -0.55
CNOT2-208ENST00000548021 CNGB1Q14028 1251 aaPredicted RBP11.61□□□□□ -0.55
CNOT2-208ENST00000548021 C14orf93Q9H972 538 aaKnown RBP11.61□□□□□ -0.55
CNOT2-208ENST00000548021 SUPT16HQ9Y5B9 1047 aaKnown RBP11.61□□□□□ -0.55
CNOT2-208ENST00000548021 LRPPRCP42704 1394 aaKnown RBP11.61□□□□□ -0.55
CNOT2-208ENST00000548021 ZBED9Q6R2W3 1325 aa11.6□□□□□ -0.55
CNOT2-208ENST00000548021 SETD1AO15047 1707 aaKnown RBP11.6□□□□□ -0.55
CNOT2-208ENST00000548021 IDI1Q13907 227 aa11.6□□□□□ -0.55
CNOT2-208ENST00000548021 PANK3Q9H999 370 aa11.59□□□□□ -0.55
CNOT2-208ENST00000548021 SLC52A1Q9NWF4 448 aa11.59□□□□□ -0.55
CNOT2-208ENST00000548021 TULP4Q9NRJ4 1543 aa11.59□□□□□ -0.55
CNOT2-208ENST00000548021 CDCA8Q53HL2 280 aa11.58□□□□□ -0.56
CNOT2-208ENST00000548021 FBXO31Q5XUX0 539 aaPredicted RBP11.58□□□□□ -0.56
CNOT2-208ENST00000548021 PNISRQ8TF01 805 aaKnown RBP11.57□□□□□ -0.56
CNOT2-208ENST00000548021 CENPJQ9HC77 1338 aaPredicted RBP11.57□□□□□ -0.56
CNOT2-208ENST00000548021 A2ML1A8K2U0 1454 aa11.57□□□□□ -0.56
CNOT2-208ENST00000548021 USP32Q8NFA0 1604 aa11.57□□□□□ -0.56
CNOT2-208ENST00000548021 NPM3O75607 178 aaKnown RBP11.56□□□□□ -0.56
CNOT2-208ENST00000548021 NLRP13Q86W25 1043 aa11.56□□□□□ -0.56
CNOT2-208ENST00000548021 ALKQ9UM73 1620 aa11.56□□□□□ -0.56
CNOT2-208ENST00000548021 NRXN3Q9Y4C0 1643 aa11.56□□□□□ -0.56
CNOT2-208ENST00000548021 NPC1L1Q9UHC9 1359 aa11.55□□□□□ -0.56
CNOT2-208ENST00000548021 VGFO15240 615 aaPredicted RBP11.55□□□□□ -0.56
CNOT2-208ENST00000548021 TMC1Q8TDI8 760 aa11.55□□□□□ -0.56
CNOT2-208ENST00000548021 CC2D1BQ5T0F9 858 aaKnown RBP11.54□□□□□ -0.56
CNOT2-208ENST00000548021 NUTM2DQ5VT03 806 aaPredicted RBP11.54□□□□□ -0.56
CNOT2-208ENST00000548021 TMEM132EQ6IEE7 984 aa11.54□□□□□ -0.56
CNOT2-208ENST00000548021 PTPRMP28827 1452 aa11.54□□□□□ -0.56
CNOT2-208ENST00000548021 UBR1Q8IWV7 1749 aa11.53□□□□□ -0.56
CNOT2-208ENST00000548021 SLC24A1O60721 1099 aa11.53□□□□□ -0.56
CNOT2-208ENST00000548021 AMER1Q5JTC6 1135 aaPredicted RBP11.53□□□□□ -0.56
CNOT2-208ENST00000548021 TRAK1Q9UPV9 953 aa11.53□□□□□ -0.56
CNOT2-208ENST00000548021 BLMP54132 1417 aaPredicted RBP11.52□□□□□ -0.56
CNOT2-208ENST00000548021 INSRP06213 1382 aa11.52□□□□□ -0.57
CNOT2-208ENST00000548021 SMG6Q86US8 1419 aaKnown RBP11.52□□□□□ -0.57
CNOT2-208ENST00000548021 RIMS2Q9UQ26 1411 aa11.52□□□□□ -0.57
CNOT2-208ENST00000548021 MLECQ14165 292 aa11.51□□□□□ -0.57
CNOT2-208ENST00000548021 FKBP8Q14318 412 aa11.51□□□□□ -0.57
CNOT2-208ENST00000548021 KNDC1Q76NI1 1749 aa11.51□□□□□ -0.57
CNOT2-208ENST00000548021 DLC1Q96QB1 1528 aa11.5□□□□□ -0.57
CNOT2-208ENST00000548021 FER1L4A9Z1Z3 1794 aa11.5□□□□□ -0.57
CNOT2-208ENST00000548021 KNSTRNQ9Y448 316 aa11.5□□□□□ -0.57
CNOT2-208ENST00000548021 YTHDC2Q9H6S0 1430 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 159.8 ms