RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 PRR20AP86496 221 aa7.52□□□□□ -1.2
CEP290-204ENST00000547926 ZNF697Q5TEC3 545 aa7.52□□□□□ -1.2
CEP290-204ENST00000547926 S1PR4O95977 384 aa7.52□□□□□ -1.21
CEP290-204ENST00000547926 NPDC1Q9NQX5 325 aaPredicted RBP7.5□□□□□ -1.21
CEP290-204ENST00000547926 OSBPP22059 807 aa7.49□□□□□ -1.21
CEP290-204ENST00000547926 PADI6Q6TGC4 694 aa7.49□□□□□ -1.21
CEP290-204ENST00000547926 PCDHB3Q9Y5E6 796 aa7.49□□□□□ -1.21
CEP290-204ENST00000547926 TTC13Q8NBP0 860 aa7.48□□□□□ -1.21
CEP290-204ENST00000547926 GMPR2Q9P2T1 348 aaKnown RBP7.48□□□□□ -1.21
CEP290-204ENST00000547926 NFX1Q12986 1120 aaKnown RBP7.48□□□□□ -1.21
CEP290-204ENST00000547926 HDGFP51858 240 aaKnown RBP7.47□□□□□ -1.21
CEP290-204ENST00000547926 WFS1O76024 890 aa7.46□□□□□ -1.21
CEP290-204ENST00000547926 ANKLE1Q8NAG6 615 aa7.46□□□□□ -1.21
CEP290-204ENST00000547926 PKD2L1Q9P0L9 805 aa7.46□□□□□ -1.21
CEP290-204ENST00000547926 CERKQ8TCT0 537 aa7.46□□□□□ -1.22
CEP290-204ENST00000547926 EYA1Q99502 592 aa7.46□□□□□ -1.22
CEP290-204ENST00000547926 LOC100996750A0A140TA64 210 aa7.45□□□□□ -1.22
CEP290-204ENST00000547926 FOXC1Q12948 553 aa7.45□□□□□ -1.22
CEP290-204ENST00000547926 SLF2Q8IX21 1173 aa7.45□□□□□ -1.22
CEP290-204ENST00000547926 KRTAP4-6Q9BYQ5 205 aa7.45□□□□□ -1.22
CEP290-204ENST00000547926 C11orf95C9JLR9 678 aaPredicted RBP7.41□□□□□ -1.22
CEP290-204ENST00000547926 RBM27Q9P2N5 1060 aaKnown RBP7.4□□□□□ -1.22
CEP290-204ENST00000547926 SPDYE16A6NNV3 312 aaPredicted RBP7.4□□□□□ -1.23
CEP290-204ENST00000547926 STK17AQ9UEE5 414 aa7.4□□□□□ -1.23
CEP290-204ENST00000547926 WIPF1O43516 503 aa7.39□□□□□ -1.23
CEP290-204ENST00000547926 FAM161AQ3B820 660 aa7.39□□□□□ -1.23
CEP290-204ENST00000547926 SNRPBP14678 240 aaKnown RBP7.37□□□□□ -1.23
CEP290-204ENST00000547926 CRIPAKQ8N1N5 446 aa7.37□□□□□ -1.23
CEP290-204ENST00000547926 TOR4AQ9NXH8 423 aa7.37□□□□□ -1.23
CEP290-204ENST00000547926 DCAF8L2P0C7V8 631 aa7.37□□□□□ -1.23
CEP290-204ENST00000547926 SLC10A3P09131 477 aa7.36□□□□□ -1.23
CEP290-204ENST00000547926 ADH1BP00325 375 aa7.36□□□□□ -1.23
CEP290-204ENST00000547926 AVPP01185 164 aa7.36□□□□□ -1.23
CEP290-204ENST00000547926 AXIN1O15169 862 aa7.35□□□□□ -1.23
CEP290-204ENST00000547926 ACTN4O43707 911 aaKnown RBP7.35□□□□□ -1.23
CEP290-204ENST00000547926 PUS10Q3MIT2 529 aaKnown RBP7.35□□□□□ -1.23
CEP290-204ENST00000547926 CFHP08603 1231 aa7.34□□□□□ -1.23
CEP290-204ENST00000547926 SLC6A16Q9GZN6 736 aa7.34□□□□□ -1.23
CEP290-204ENST00000547926 NECTIN2Q92692 538 aa7.34□□□□□ -1.23
CEP290-204ENST00000547926 E2F4Q16254 413 aa7.33□□□□□ -1.24
CEP290-204ENST00000547926 SCUBE3Q8IX30 993 aa7.33□□□□□ -1.24
CEP290-204ENST00000547926 TMEM134Q9H6X4 195 aa7.32□□□□□ -1.24
CEP290-204ENST00000547926 LORP23490 312 aaPredicted RBP7.31□□□□□ -1.24
CEP290-204ENST00000547926 PRR14Q9BWN1 585 aa7.31□□□□□ -1.24
CEP290-204ENST00000547926 INSM1Q01101 510 aaPredicted RBP7.31□□□□□ -1.24
CEP290-204ENST00000547926 ARIH1Q9Y4X5 557 aaPredicted RBP7.3□□□□□ -1.24
CEP290-204ENST00000547926 TERTO14746 1132 aaKnown RBP7.29□□□□□ -1.24
CEP290-204ENST00000547926 RCCD1A6NED2 376 aa7.28□□□□□ -1.24
CEP290-204ENST00000547926 DNAJB2P25686 324 aa7.28□□□□□ -1.24
CEP290-204ENST00000547926 FCF1Q9Y324 198 aaKnown RBP7.28□□□□□ -1.24
CEP290-204ENST00000547926 CYP4X1Q8N118 509 aa7.28□□□□□ -1.24
CEP290-204ENST00000547926 ATP13A2Q9NQ11 1180 aa7.28□□□□□ -1.24
CEP290-204ENST00000547926 ADGRG1Q9Y653 693 aa7.28□□□□□ -1.24
CEP290-204ENST00000547926 MLLT3P42568 568 aaPredicted RBP7.27□□□□□ -1.25
CEP290-204ENST00000547926 SLC4A3P48751 1232 aa7.27□□□□□ -1.25
CEP290-204ENST00000547926 SPSB2Q99619 263 aa7.27□□□□□ -1.25
CEP290-204ENST00000547926 SMCPP49901 116 aaPredicted RBP7.27□□□□□ -1.25
CEP290-204ENST00000547926 PRDM9Q9NQV7 894 aa7.27□□□□□ -1.25
CEP290-204ENST00000547926 SMPD1P17405 629 aa7.26□□□□□ -1.25
CEP290-204ENST00000547926 KMT5BQ4FZB7 885 aa7.26□□□□□ -1.25
CEP290-204ENST00000547926 J3QL48 77 aa7.25□□□□□ -1.25
CEP290-204ENST00000547926 NR1I2O75469 434 aa7.25□□□□□ -1.25
CEP290-204ENST00000547926 PTGDRQ13258 359 aa7.25□□□□□ -1.25
CEP290-204ENST00000547926 CTC1Q2NKJ3 1217 aa7.24□□□□□ -1.25
CEP290-204ENST00000547926 FAM160A2Q8N612 972 aaPredicted RBP7.24□□□□□ -1.25
CEP290-204ENST00000547926 LMOD2Q6P5Q4 547 aa7.23□□□□□ -1.25
CEP290-204ENST00000547926 TRIM47Q96LD4 638 aa7.23□□□□□ -1.25
CEP290-204ENST00000547926 TTC24A2A3L6 582 aaPredicted RBP7.22□□□□□ -1.25
CEP290-204ENST00000547926 GMPRP36959 345 aa7.22□□□□□ -1.25
CEP290-204ENST00000547926 RPIAP49247 311 aa7.22□□□□□ -1.25
CEP290-204ENST00000547926 VEGFBP49765 207 aa7.22□□□□□ -1.25
CEP290-204ENST00000547926 THAP11Q96EK4 314 aa7.22□□□□□ -1.25
CEP290-204ENST00000547926 HPS1Q92902 700 aa7.21□□□□□ -1.25
CEP290-204ENST00000547926 RBM46Q8TBY0 533 aaKnown RBP7.21□□□□□ -1.26
CEP290-204ENST00000547926 CD2BP2O95400 341 aaKnown RBP7.2□□□□□ -1.26
CEP290-204ENST00000547926 SUZ12Q15022 739 aaKnown RBP7.19□□□□□ -1.26
CEP290-204ENST00000547926 MRGPRX2Q96LB1 330 aa7.18□□□□□ -1.26
CEP290-204ENST00000547926 FUT2Q10981 343 aa7.17□□□□□ -1.26
CEP290-204ENST00000547926 MORN1Q5T089 497 aa7.17□□□□□ -1.26
CEP290-204ENST00000547926 NLRP7Q8WX94 980 aa7.17□□□□□ -1.26
CEP290-204ENST00000547926 ERBB4Q15303 1308 aa7.17□□□□□ -1.26
CEP290-204ENST00000547926 SLC27A5Q9Y2P5 690 aa7.16□□□□□ -1.26
CEP290-204ENST00000547926 ZSCAN1Q8NBB4 408 aa7.15□□□□□ -1.26
CEP290-204ENST00000547926 RNF19BQ6ZMZ0 732 aa7.15□□□□□ -1.27
CEP290-204ENST00000547926 SNIP1Q8TAD8 396 aaKnown RBP7.15□□□□□ -1.27
CEP290-204ENST00000547926 WNT7AO00755 349 aa7.14□□□□□ -1.27
CEP290-204ENST00000547926 BMP1P13497 986 aa7.14□□□□□ -1.27
CEP290-204ENST00000547926 PXYLP1Q8TE99 480 aa7.14□□□□□ -1.27
CEP290-204ENST00000547926 WDR70Q9NW82 654 aa7.13□□□□□ -1.27
CEP290-204ENST00000547926 TRIM32Q13049 653 aa7.12□□□□□ -1.27
CEP290-204ENST00000547926 NXF1Q9UBU9 619 aaKnown RBP7.12□□□□□ -1.27
CEP290-204ENST00000547926 NUTM2FA1L443 756 aa7.11□□□□□ -1.27
CEP290-204ENST00000547926 FECHP22830 423 aa7.11□□□□□ -1.27
CEP290-204ENST00000547926 SENP2Q9HC62 589 aa7.11□□□□□ -1.27
CEP290-204ENST00000547926 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.1□□□□□ -1.27
CEP290-204ENST00000547926 SKOR1P84550 965 aa7.1□□□□□ -1.27
CEP290-204ENST00000547926 BRICD5Q6PL45 260 aa7.1□□□□□ -1.27
CEP290-204ENST00000547926 BBXQ8WY36 941 aaPredicted RBP7.1□□□□□ -1.27
CEP290-204ENST00000547926 GSK3AP49840 483 aa7.09□□□□□ -1.27
CEP290-204ENST00000547926 TRIM46Q7Z4K8 759 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms