RNA–Protein interactions for RNA: ENST00000547394.6

CUX1-212, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-212ENST00000547394 RIMBP3CA6NJZ7 1639 aa14.98□□□□□ -0.01
CUX1-212ENST00000547394 RIMBP3BA6NNM3 1639 aa14.98□□□□□ -0.01
CUX1-212ENST00000547394 RNF17Q9BXT8 1623 aaKnown RBP14.98□□□□□ -0.01
CUX1-212ENST00000547394 RIMBP3Q9UFD9 1639 aa14.98□□□□□ -0.01
CUX1-212ENST00000547394 MROH2AA6NES4 1674 aa14.98□□□□□ -0.01
CUX1-212ENST00000547394 SCAF11Q99590 1463 aaKnown RBP14.97□□□□□ -0.01
CUX1-212ENST00000547394 NLRP13Q86W25 1043 aa14.97□□□□□ -0.01
CUX1-212ENST00000547394 IDI1Q13907 227 aa14.96□□□□□ -0.01
CUX1-212ENST00000547394 KNSTRNQ9Y448 316 aa14.96□□□□□ -0.01
CUX1-212ENST00000547394 TSHZ2Q9NRE2 1034 aa14.96□□□□□ -0.01
CUX1-212ENST00000547394 PARD3Q8TEW0 1356 aa14.96□□□□□ -0.02
CUX1-212ENST00000547394 STK26Q9P289 416 aa14.95□□□□□ -0.02
CUX1-212ENST00000547394 NEO1Q92859 1461 aa14.95□□□□□ -0.02
CUX1-212ENST00000547394 ABCC3O15438 1527 aa14.94□□□□□ -0.02
CUX1-212ENST00000547394 BRD4O60885 1362 aaPredicted RBP14.94□□□□□ -0.02
CUX1-212ENST00000547394 DIP2CQ9Y2E4 1556 aa14.93□□□□□ -0.02
CUX1-212ENST00000547394 CFAP74Q9C0B2 1584 aa14.93□□□□□ -0.02
CUX1-212ENST00000547394 TNNT2P45379 298 aaPredicted RBP14.92□□□□□ -0.02
CUX1-212ENST00000547394 B4GALNT3Q6L9W6 998 aa14.92□□□□□ -0.02
CUX1-212ENST00000547394 KIF1BO60333 1816 aa14.92□□□□□ -0.02
CUX1-212ENST00000547394 CDCA7LQ96GN5 454 aa14.91□□□□□ -0.02
CUX1-212ENST00000547394 LAMC1P11047 1609 aa14.91□□□□□ -0.02
CUX1-212ENST00000547394 IQGAP1P46940 1657 aa14.91□□□□□ -0.02
CUX1-212ENST00000547394 MAP3K4Q9Y6R4 1608 aa14.91□□□□□ -0.02
CUX1-212ENST00000547394 AMER1Q5JTC6 1135 aaPredicted RBP14.91□□□□□ -0.02
CUX1-212ENST00000547394 SIGLEC1Q9BZZ2 1709 aa14.9□□□□□ -0.02
CUX1-212ENST00000547394 MYT1Q01538 1121 aa14.9□□□□□ -0.02
CUX1-212ENST00000547394 CARD14Q9BXL6 1004 aa14.9□□□□□ -0.02
CUX1-212ENST00000547394 LMTK2Q8IWU2 1503 aa14.89□□□□□ -0.03
CUX1-212ENST00000547394 SLC12A5Q9H2X9 1139 aa14.89□□□□□ -0.03
CUX1-212ENST00000547394 NUDCQ9Y266 331 aa14.89□□□□□ -0.03
CUX1-212ENST00000547394 LRPPRCP42704 1394 aaKnown RBP14.89□□□□□ -0.03
CUX1-212ENST00000547394 EIF3AQ14152 1382 aaKnown RBP14.89□□□□□ -0.03
CUX1-212ENST00000547394 PPP2R1AP30153 589 aa14.89□□□□□ -0.03
CUX1-212ENST00000547394 RICTORQ6R327 1708 aa14.88□□□□□ -0.03
CUX1-212ENST00000547394 CENPJQ9HC77 1338 aaPredicted RBP14.88□□□□□ -0.03
CUX1-212ENST00000547394 PLPPR3Q6T4P5 718 aa14.88□□□□□ -0.03
CUX1-212ENST00000547394 ADAMTS8Q9UP79 889 aa14.88□□□□□ -0.03
CUX1-212ENST00000547394 ADGRB3O60242 1522 aa14.88□□□□□ -0.03
CUX1-212ENST00000547394 C14orf93Q9H972 538 aaKnown RBP14.88□□□□□ -0.03
CUX1-212ENST00000547394 STAC3Q96MF2 364 aa14.87□□□□□ -0.03
CUX1-212ENST00000547394 MYOM2P54296 1465 aa14.87□□□□□ -0.03
CUX1-212ENST00000547394 ERVK-7P63135 1459 aa14.87□□□□□ -0.03
CUX1-212ENST00000547394 CDCA8Q53HL2 280 aa14.87□□□□□ -0.03
CUX1-212ENST00000547394 STAG3Q9UJ98 1225 aa14.87□□□□□ -0.03
CUX1-212ENST00000547394 CCDC146Q8IYE0 955 aa14.86□□□□□ -0.03
CUX1-212ENST00000547394 CAMSAP1Q5T5Y3 1602 aa14.86□□□□□ -0.03
CUX1-212ENST00000547394 SYNMO15061 1565 aa14.86□□□□□ -0.03
CUX1-212ENST00000547394 PIK3C2GO75747 1445 aa14.85□□□□□ -0.03
CUX1-212ENST00000547394 DIP2BQ9P265 1576 aa14.84□□□□□ -0.03
CUX1-212ENST00000547394 CABP2Q9NPB3 220 aa14.84□□□□□ -0.03
CUX1-212ENST00000547394 SMG6Q86US8 1419 aaKnown RBP14.84□□□□□ -0.03
CUX1-212ENST00000547394 VGFO15240 615 aaPredicted RBP14.83□□□□□ -0.04
CUX1-212ENST00000547394 IFT172Q9UG01 1749 aa14.81□□□□□ -0.04
CUX1-212ENST00000547394 NRXN1Q9ULB1 1477 aa14.81□□□□□ -0.04
CUX1-212ENST00000547394 WDR43Q15061 677 aaKnown RBP eCLIP14.81□□□□□ -0.04
CUX1-212ENST00000547394 MINK1Q8N4C8 1332 aaPredicted RBP14.81□□□□□ -0.04
CUX1-212ENST00000547394 PLIN1O60240 522 aa14.79□□□□□ -0.04
CUX1-212ENST00000547394 PPP4R2Q9NY27 417 aa14.79□□□□□ -0.04
CUX1-212ENST00000547394 MYOM1P52179 1685 aa14.79□□□□□ -0.04
CUX1-212ENST00000547394 PPLO60437 1756 aa14.79□□□□□ -0.04
CUX1-212ENST00000547394 SLC52A1Q9NWF4 448 aa14.78□□□□□ -0.04
CUX1-212ENST00000547394 ADGRB1O14514 1584 aa14.78□□□□□ -0.04
CUX1-212ENST00000547394 ASXL1Q8IXJ9 1541 aa14.78□□□□□ -0.04
CUX1-212ENST00000547394 GLI2P10070 1586 aa14.78□□□□□ -0.04
CUX1-212ENST00000547394 RPGRIP1LQ68CZ1 1315 aa14.77□□□□□ -0.04
CUX1-212ENST00000547394 SRPK2P78362 688 aaKnown RBP14.77□□□□□ -0.04
CUX1-212ENST00000547394 PRAM1Q96QH2 718 aa14.77□□□□□ -0.04
CUX1-212ENST00000547394 NSD3Q9BZ95 1437 aa14.77□□□□□ -0.05
CUX1-212ENST00000547394 MYO5BQ9ULV0 1848 aa14.77□□□□□ -0.05
CUX1-212ENST00000547394 KDM5AP29375 1690 aaKnown RBP14.77□□□□□ -0.05
CUX1-212ENST00000547394 NEXMIFQ5QGS0 1516 aa14.76□□□□□ -0.05
CUX1-212ENST00000547394 KIAA1210Q9ULL0 1709 aa14.76□□□□□ -0.05
CUX1-212ENST00000547394 PIK3C2BO00750 1634 aa14.76□□□□□ -0.05
CUX1-212ENST00000547394 RCAN3Q9UKA8 241 aa14.75□□□□□ -0.05
CUX1-212ENST00000547394 POGKQ9P215 609 aa14.75□□□□□ -0.05
CUX1-212ENST00000547394 WAPLQ7Z5K2 1190 aa14.75□□□□□ -0.05
CUX1-212ENST00000547394 MORC1Q86VD1 984 aa14.75□□□□□ -0.05
CUX1-212ENST00000547394 NEURL4Q96JN8 1562 aa14.74□□□□□ -0.05
CUX1-212ENST00000547394 PLEKHH1Q9ULM0 1364 aa14.74□□□□□ -0.05
CUX1-212ENST00000547394 NEUROD2Q15784 382 aa14.74□□□□□ -0.05
CUX1-212ENST00000547394 APAF1O14727 1248 aa14.74□□□□□ -0.05
CUX1-212ENST00000547394 ESF1Q9H501 851 aaKnown RBP14.74□□□□□ -0.05
CUX1-212ENST00000547394 ARHGAP31Q2M1Z3 1444 aa14.73□□□□□ -0.05
CUX1-212ENST00000547394 EXOC6Q8TAG9 804 aa14.73□□□□□ -0.05
CUX1-212ENST00000547394 RBM19Q9Y4C8 960 aaKnown RBP14.73□□□□□ -0.05
CUX1-212ENST00000547394 CEBPAP49715 358 aaPredicted RBP14.72□□□□□ -0.05
CUX1-212ENST00000547394 RRP7AQ9Y3A4 280 aaKnown RBP14.72□□□□□ -0.05
CUX1-212ENST00000547394 QRICH2Q9H0J4 1663 aa14.72□□□□□ -0.05
CUX1-212ENST00000547394 PREX1Q8TCU6 1659 aa14.71□□□□□ -0.05
CUX1-212ENST00000547394 CCDC136Q96JN2 1154 aa14.71□□□□□ -0.05
CUX1-212ENST00000547394 EVC2Q86UK5 1308 aa14.71□□□□□ -0.05
CUX1-212ENST00000547394 RRP1P56182 461 aaKnown RBP14.71□□□□□ -0.05
CUX1-212ENST00000547394 BLMP54132 1417 aaPredicted RBP14.71□□□□□ -0.05
CUX1-212ENST00000547394 SPINK5Q9NQ38 1064 aaPredicted RBP14.71□□□□□ -0.06
CUX1-212ENST00000547394 DMRT2Q9Y5R5 561 aa14.71□□□□□ -0.06
CUX1-212ENST00000547394 GGNBP2Q9H3C7 697 aa14.7□□□□□ -0.06
CUX1-212ENST00000547394 ZMYM4Q5VZL5 1548 aa14.7□□□□□ -0.06
CUX1-212ENST00000547394 FBLN1P23142 703 aa14.7□□□□□ -0.06
CUX1-212ENST00000547394 CLTCQ00610 1675 aaKnown RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms