RNA–Protein interactions for RNA: ENST00000547034.5

TMTC3-202, Transcript of transmembrane and tetratricopeptide repeat containing 3, humanhuman

TSL 1 (best)

Gene TMTC3, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC3-202ENST00000547034 DISP3Q9P2K9 1392 aa23.61■■□□□ 1.37
TMTC3-202ENST00000547034 CFAP65Q6ZU64 1925 aaKnown RBP23.61■■□□□ 1.37
TMTC3-202ENST00000547034 KTN1Q86UP2 1357 aaKnown RBP23.61■■□□□ 1.37
TMTC3-202ENST00000547034 CCDC184Q52MB2 194 aa23.6■■□□□ 1.37
TMTC3-202ENST00000547034 POLR3GLQ9BT43 218 aa23.6■■□□□ 1.37
TMTC3-202ENST00000547034 SETBP1Q9Y6X0 1596 aa23.59■■□□□ 1.37
TMTC3-202ENST00000547034 TMF1P82094 1093 aa23.56■■□□□ 1.36
TMTC3-202ENST00000547034 RPGRIP1LQ68CZ1 1315 aa23.56■■□□□ 1.36
TMTC3-202ENST00000547034 ADGRF5Q8IZF2 1346 aa23.56■■□□□ 1.36
TMTC3-202ENST00000547034 PREX1Q8TCU6 1659 aa23.55■■□□□ 1.36
TMTC3-202ENST00000547034 MYO3AQ8NEV4 1616 aa23.55■■□□□ 1.36
TMTC3-202ENST00000547034 EIF3AQ14152 1382 aaKnown RBP23.55■■□□□ 1.36
TMTC3-202ENST00000547034 MRS2Q9HD23 443 aa23.54■■□□□ 1.36
TMTC3-202ENST00000547034 PIK3C2GO75747 1445 aa23.54■■□□□ 1.36
TMTC3-202ENST00000547034 ARHGEF40Q8TER5 1519 aa23.53■■□□□ 1.36
TMTC3-202ENST00000547034 NEXMIFQ5QGS0 1516 aa23.5■■□□□ 1.35
TMTC3-202ENST00000547034 PER1O15534 1290 aaPredicted RBP23.5■■□□□ 1.35
TMTC3-202ENST00000547034 PPP6R1Q9UPN7 881 aa23.5■■□□□ 1.35
TMTC3-202ENST00000547034 RALBP1Q15311 655 aa23.49■■□□□ 1.35
TMTC3-202ENST00000547034 CFAP70Q5T0N1 1121 aa23.49■■□□□ 1.35
TMTC3-202ENST00000547034 PARD3Q8TEW0 1356 aa23.48■■□□□ 1.35
TMTC3-202ENST00000547034 ADGRB1O14514 1584 aa23.48■■□□□ 1.35
TMTC3-202ENST00000547034 HNRNPUQ00839 825 aaKnown RBP eCLIP23.47■■□□□ 1.35
TMTC3-202ENST00000547034 SLC52A1Q9NWF4 448 aa23.47■■□□□ 1.35
TMTC3-202ENST00000547034 SBNO2Q9Y2G9 1366 aa23.46■■□□□ 1.35
TMTC3-202ENST00000547034 MYOM1P52179 1685 aa23.46■■□□□ 1.35
TMTC3-202ENST00000547034 TMEM131LA2VDJ0 1609 aa23.46■■□□□ 1.35
TMTC3-202ENST00000547034 ZFYVE9O95405 1425 aa23.45■■□□□ 1.35
TMTC3-202ENST00000547034 SLC24A1O60721 1099 aa23.45■■□□□ 1.34
TMTC3-202ENST00000547034 CDCA8Q53HL2 280 aa23.45■■□□□ 1.34
TMTC3-202ENST00000547034 C14orf93Q9H972 538 aaKnown RBP23.45■■□□□ 1.34
TMTC3-202ENST00000547034 MYBBP1AQ9BQG0 1328 aaKnown RBP23.44■■□□□ 1.34
TMTC3-202ENST00000547034 KDM5AP29375 1690 aaKnown RBP23.44■■□□□ 1.34
TMTC3-202ENST00000547034 BRD4O60885 1362 aaPredicted RBP23.44■■□□□ 1.34
TMTC3-202ENST00000547034 ERVK-7P63135 1459 aa23.44■■□□□ 1.34
TMTC3-202ENST00000547034 CHGAP10645 457 aaKnown RBP23.43■■□□□ 1.34
TMTC3-202ENST00000547034 MYO5BQ9ULV0 1848 aa23.41■■□□□ 1.34
TMTC3-202ENST00000547034 CLTCQ00610 1675 aaKnown RBP23.4■■□□□ 1.34
TMTC3-202ENST00000547034 IDI1Q13907 227 aa23.4■■□□□ 1.34
TMTC3-202ENST00000547034 FAM9BQ8IZU0 186 aa23.4■■□□□ 1.34
TMTC3-202ENST00000547034 SPATA31D1Q6ZQQ2 1576 aa23.39■■□□□ 1.34
TMTC3-202ENST00000547034 PANK3Q9H999 370 aa23.39■■□□□ 1.33
TMTC3-202ENST00000547034 ZBED9Q6R2W3 1325 aa23.39■■□□□ 1.33
TMTC3-202ENST00000547034 VGFO15240 615 aaPredicted RBP23.37■■□□□ 1.33
TMTC3-202ENST00000547034 SUPT16HQ9Y5B9 1047 aaKnown RBP23.37■■□□□ 1.33
TMTC3-202ENST00000547034 PNISRQ8TF01 805 aaKnown RBP23.36■■□□□ 1.33
TMTC3-202ENST00000547034 LRPPRCP42704 1394 aaKnown RBP23.36■■□□□ 1.33
TMTC3-202ENST00000547034 QRICH2Q9H0J4 1663 aa23.35■■□□□ 1.33
TMTC3-202ENST00000547034 NLRP13Q86W25 1043 aa23.33■■□□□ 1.33
TMTC3-202ENST00000547034 ARHGEF28Q8N1W1 1705 aaKnown RBP23.32■■□□□ 1.32
TMTC3-202ENST00000547034 TMC1Q8TDI8 760 aa23.32■■□□□ 1.32
TMTC3-202ENST00000547034 NPC1L1Q9UHC9 1359 aa23.32■■□□□ 1.32
TMTC3-202ENST00000547034 CENPJQ9HC77 1338 aaPredicted RBP23.31■■□□□ 1.32
TMTC3-202ENST00000547034 ASXL1Q8IXJ9 1541 aa23.29■■□□□ 1.32
TMTC3-202ENST00000547034 CNGB1Q14028 1251 aaPredicted RBP23.29■■□□□ 1.32
TMTC3-202ENST00000547034 FBXO31Q5XUX0 539 aaPredicted RBP23.29■■□□□ 1.32
TMTC3-202ENST00000547034 INSRP06213 1382 aa23.27■■□□□ 1.32
TMTC3-202ENST00000547034 AMER1Q5JTC6 1135 aaPredicted RBP23.26■■□□□ 1.31
TMTC3-202ENST00000547034 KNSTRNQ9Y448 316 aa23.24■■□□□ 1.31
TMTC3-202ENST00000547034 A2ML1A8K2U0 1454 aa23.23■■□□□ 1.31
TMTC3-202ENST00000547034 CC2D1BQ5T0F9 858 aaKnown RBP23.23■■□□□ 1.31
TMTC3-202ENST00000547034 TMEM132EQ6IEE7 984 aa23.22■■□□□ 1.31
TMTC3-202ENST00000547034 TRAK1Q9UPV9 953 aa23.22■■□□□ 1.31
TMTC3-202ENST00000547034 PUS7Q96PZ0 661 aaKnown RBP23.22■■□□□ 1.31
TMTC3-202ENST00000547034 ALKQ9UM73 1620 aa23.19■■□□□ 1.3
TMTC3-202ENST00000547034 NUTM2DQ5VT03 806 aaPredicted RBP23.18■■□□□ 1.3
TMTC3-202ENST00000547034 TULP4Q9NRJ4 1543 aa23.18■■□□□ 1.3
TMTC3-202ENST00000547034 NEFLP07196 543 aa23.17■■□□□ 1.3
TMTC3-202ENST00000547034 ZMYM3Q14202 1370 aa23.17■■□□□ 1.3
TMTC3-202ENST00000547034 SMG6Q86US8 1419 aaKnown RBP23.17■■□□□ 1.3
TMTC3-202ENST00000547034 SETD1AO15047 1707 aaKnown RBP23.16■■□□□ 1.3
TMTC3-202ENST00000547034 PTPRMP28827 1452 aa23.16■■□□□ 1.3
TMTC3-202ENST00000547034 FKBP8Q14318 412 aa23.16■■□□□ 1.3
TMTC3-202ENST00000547034 USP32Q8NFA0 1604 aa23.16■■□□□ 1.3
TMTC3-202ENST00000547034 BLMP54132 1417 aaPredicted RBP23.15■■□□□ 1.3
TMTC3-202ENST00000547034 MLECQ14165 292 aa23.15■■□□□ 1.3
TMTC3-202ENST00000547034 YTHDC2Q9H6S0 1430 aaKnown RBP23.13■■□□□ 1.29
TMTC3-202ENST00000547034 RIMS2Q9UQ26 1411 aa23.13■■□□□ 1.29
TMTC3-202ENST00000547034 PPP2R1AP30153 589 aa23.12■■□□□ 1.29
TMTC3-202ENST00000547034 CARD14Q9BXL6 1004 aa23.11■■□□□ 1.29
TMTC3-202ENST00000547034 DLC1Q96QB1 1528 aa23.11■■□□□ 1.29
TMTC3-202ENST00000547034 EVC2Q86UK5 1308 aa23.1■■□□□ 1.29
TMTC3-202ENST00000547034 STAG3Q9UJ98 1225 aa23.1■■□□□ 1.29
TMTC3-202ENST00000547034 NRXN3Q9Y4C0 1643 aa23.09■■□□□ 1.29
TMTC3-202ENST00000547034 ESF1Q9H501 851 aaKnown RBP23.08■■□□□ 1.29
TMTC3-202ENST00000547034 TNRQ92752 1358 aa23.07■■□□□ 1.28
TMTC3-202ENST00000547034 NUDCQ9Y266 331 aa23.06■■□□□ 1.28
TMTC3-202ENST00000547034 UBR1Q8IWV7 1749 aa23.06■■□□□ 1.28
TMTC3-202ENST00000547034 NINLQ9Y2I6 1382 aa23.06■■□□□ 1.28
TMTC3-202ENST00000547034 NSD3Q9BZ95 1437 aa23.03■■□□□ 1.28
TMTC3-202ENST00000547034 ERICH6BQ5W0A0 696 aa23.03■■□□□ 1.28
TMTC3-202ENST00000547034 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.03■■□□□ 1.28
TMTC3-202ENST00000547034 ANKRD36BQ8N2N9 1353 aa23.02■■□□□ 1.28
TMTC3-202ENST00000547034 SLC12A5Q9H2X9 1139 aa23.02■■□□□ 1.28
TMTC3-202ENST00000547034 KNDC1Q76NI1 1749 aa23■■□□□ 1.27
TMTC3-202ENST00000547034 NLRP1Q9C000 1473 aa23■■□□□ 1.27
TMTC3-202ENST00000547034 PDE3BQ13370 1112 aa22.98■■□□□ 1.27
TMTC3-202ENST00000547034 STK26Q9P289 416 aa22.98■■□□□ 1.27
TMTC3-202ENST00000547034 RNF123Q5XPI4 1314 aa22.98■■□□□ 1.27
TMTC3-202ENST00000547034 ATAD2Q6PL18 1390 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms