RNA–Protein interactions for RNA: ENST00000546603.5

CPNE8-204, Transcript of copine 8, humanhuman

TSL 3

Gene CPNE8, Length 1,036 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-204ENST00000546603 HPS5Q9UPZ3 1129 aa13.86□□□□□ -0.19
CPNE8-204ENST00000546603 SLF2Q8IX21 1173 aa13.85□□□□□ -0.19
CPNE8-204ENST00000546603 KRI1Q8N9T8 703 aaKnown RBP13.85□□□□□ -0.19
CPNE8-204ENST00000546603 PPP4CP60510 307 aa13.84□□□□□ -0.19
CPNE8-204ENST00000546603 NYAP1Q6ZVC0 841 aa13.84□□□□□ -0.19
CPNE8-204ENST00000546603 NECTIN2Q92692 538 aa13.84□□□□□ -0.19
CPNE8-204ENST00000546603 RNF40O75150 1001 aa13.82□□□□□ -0.2
CPNE8-204ENST00000546603 WBP1LQ9NX94 342 aa13.82□□□□□ -0.2
CPNE8-204ENST00000546603 CCDC102AQ96A19 550 aa13.79□□□□□ -0.2
CPNE8-204ENST00000546603 PHOX2BQ99453 314 aa13.78□□□□□ -0.2
CPNE8-204ENST00000546603 DAXXQ9UER7 740 aaPredicted RBP13.77□□□□□ -0.21
CPNE8-204ENST00000546603 RSPH4AQ5TD94 716 aa13.74□□□□□ -0.21
CPNE8-204ENST00000546603 NLRP7Q8WX94 980 aa13.72□□□□□ -0.21
CPNE8-204ENST00000546603 PRR14Q9BWN1 585 aa13.7□□□□□ -0.22
CPNE8-204ENST00000546603 SULF1Q8IWU6 871 aa13.69□□□□□ -0.22
CPNE8-204ENST00000546603 AK7Q96M32 723 aa13.69□□□□□ -0.22
CPNE8-204ENST00000546603 SLC10A3P09131 477 aa13.67□□□□□ -0.22
CPNE8-204ENST00000546603 APLP1P51693 650 aa13.67□□□□□ -0.22
CPNE8-204ENST00000546603 MDM2Q00987 491 aaPredicted RBP13.67□□□□□ -0.22
CPNE8-204ENST00000546603 DDX11L8A8MPP1 907 aa13.66□□□□□ -0.22
CPNE8-204ENST00000546603 CLCN1P35523 988 aa13.66□□□□□ -0.22
CPNE8-204ENST00000546603 PLA2G2EQ9NZK7 142 aa13.66□□□□□ -0.22
CPNE8-204ENST00000546603 KMT5BQ4FZB7 885 aa13.65□□□□□ -0.22
CPNE8-204ENST00000546603 RDH13Q8NBN7 331 aa13.64□□□□□ -0.23
CPNE8-204ENST00000546603 GPCPD1Q9NPB8 672 aa13.64□□□□□ -0.23
CPNE8-204ENST00000546603 CFHP08603 1231 aa13.63□□□□□ -0.23
CPNE8-204ENST00000546603 SLC24A3Q9HC58 644 aa13.63□□□□□ -0.23
CPNE8-204ENST00000546603 AMHR2Q16671 573 aa13.62□□□□□ -0.23
CPNE8-204ENST00000546603 TRIM66O15016 1216 aa13.61□□□□□ -0.23
CPNE8-204ENST00000546603 ITGBL1O95965 494 aaPredicted RBP13.61□□□□□ -0.23
CPNE8-204ENST00000546603 ACTN4O43707 911 aaKnown RBP13.6□□□□□ -0.23
CPNE8-204ENST00000546603 IFFO2Q5TF58 517 aa13.59□□□□□ -0.23
CPNE8-204ENST00000546603 TMUB1Q9BVT8 246 aa13.59□□□□□ -0.23
CPNE8-204ENST00000546603 KCNC4Q03721 635 aa13.58□□□□□ -0.24
CPNE8-204ENST00000546603 TTLL12Q14166 644 aaPredicted RBP13.58□□□□□ -0.24
CPNE8-204ENST00000546603 TJAP1Q5JTD0 557 aa13.57□□□□□ -0.24
CPNE8-204ENST00000546603 MTRQ99707 1265 aa13.57□□□□□ -0.24
CPNE8-204ENST00000546603 PCDHB3Q9Y5E6 796 aa13.57□□□□□ -0.24
CPNE8-204ENST00000546603 CD46P15529 392 aa13.56□□□□□ -0.24
CPNE8-204ENST00000546603 GCGRP47871 477 aa13.56□□□□□ -0.24
CPNE8-204ENST00000546603 IL21Q9HBE4 155 aa13.56□□□□□ -0.24
CPNE8-204ENST00000546603 FAM217BQ9NTX9 383 aaPredicted RBP13.56□□□□□ -0.24
CPNE8-204ENST00000546603 REPIN1Q9BWE0 567 aaKnown RBP13.54□□□□□ -0.24
CPNE8-204ENST00000546603 SSTR3P32745 418 aaPredicted RBP13.51□□□□□ -0.25
CPNE8-204ENST00000546603 COPS2P61201 443 aa13.51□□□□□ -0.25
CPNE8-204ENST00000546603 PDE4DQ08499 809 aa13.51□□□□□ -0.25
CPNE8-204ENST00000546603 GIGYF2Q6Y7W6 1299 aaKnown RBP13.51□□□□□ -0.25
CPNE8-204ENST00000546603 BLOC1S3Q6QNY0 202 aa13.5□□□□□ -0.25
CPNE8-204ENST00000546603 PARP9Q8IXQ6 854 aa13.5□□□□□ -0.25
CPNE8-204ENST00000546603 NR1I2O75469 434 aa13.48□□□□□ -0.25
CPNE8-204ENST00000546603 ATP6V1AP38606 617 aa13.48□□□□□ -0.25
CPNE8-204ENST00000546603 FUT2Q10981 343 aa13.48□□□□□ -0.25
CPNE8-204ENST00000546603 GRIPAP1Q4V328 841 aa13.48□□□□□ -0.25
CPNE8-204ENST00000546603 ZNF516Q92618 1163 aa13.48□□□□□ -0.25
CPNE8-204ENST00000546603 ZPR1O75312 459 aa13.47□□□□□ -0.25
CPNE8-204ENST00000546603 TPRNQ4KMQ1 711 aa13.47□□□□□ -0.25
CPNE8-204ENST00000546603 KDM4AO75164 1064 aa13.46□□□□□ -0.25
CPNE8-204ENST00000546603 USP46P62068 366 aa13.45□□□□□ -0.26
CPNE8-204ENST00000546603 PUS10Q3MIT2 529 aaKnown RBP13.45□□□□□ -0.26
CPNE8-204ENST00000546603 MORN1Q5T089 497 aa13.43□□□□□ -0.26
CPNE8-204ENST00000546603 NUTM1Q86Y26 1132 aa13.43□□□□□ -0.26
CPNE8-204ENST00000546603 SCUBE3Q8IX30 993 aa13.43□□□□□ -0.26
CPNE8-204ENST00000546603 A0A0G2JS52 829 aa13.41□□□□□ -0.26
CPNE8-204ENST00000546603 BEGAINQ9BUH8 593 aa13.4□□□□□ -0.26
CPNE8-204ENST00000546603 MS4A1P11836 297 aa13.38□□□□□ -0.27
CPNE8-204ENST00000546603 NKX2-3Q8TAU0 364 aa13.38□□□□□ -0.27
CPNE8-204ENST00000546603 SLC27A5Q9Y2P5 690 aa13.37□□□□□ -0.27
CPNE8-204ENST00000546603 HOXA2O43364 376 aa13.36□□□□□ -0.27
CPNE8-204ENST00000546603 DIXDC1Q155Q3 683 aa13.36□□□□□ -0.27
CPNE8-204ENST00000546603 SPIRE2Q8WWL2 714 aa13.35□□□□□ -0.27
CPNE8-204ENST00000546603 SALL2Q9Y467 1007 aaPredicted RBP13.35□□□□□ -0.27
CPNE8-204ENST00000546603 GGCXP38435 758 aa13.34□□□□□ -0.27
CPNE8-204ENST00000546603 Q3C1V9 767 aa13.34□□□□□ -0.27
CPNE8-204ENST00000546603 TLL1O43897 1013 aa13.33□□□□□ -0.28
CPNE8-204ENST00000546603 FMNL1O95466 1100 aaPredicted RBP13.33□□□□□ -0.28
CPNE8-204ENST00000546603 ADH1BP00325 375 aa13.33□□□□□ -0.28
CPNE8-204ENST00000546603 SPSB2Q99619 263 aa13.33□□□□□ -0.28
CPNE8-204ENST00000546603 PPP1R18Q6NYC8 613 aa13.31□□□□□ -0.28
CPNE8-204ENST00000546603 THAP11Q96EK4 314 aa13.31□□□□□ -0.28
CPNE8-204ENST00000546603 KDM4CQ9H3R0 1056 aa13.31□□□□□ -0.28
CPNE8-204ENST00000546603 RGS20O76081 388 aa13.3□□□□□ -0.28
CPNE8-204ENST00000546603 BRICD5Q6PL45 260 aa13.3□□□□□ -0.28
CPNE8-204ENST00000546603 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.3□□□□□ -0.28
CPNE8-204ENST00000546603 HLA-CQ95604 372 aa13.29□□□□□ -0.28
CPNE8-204ENST00000546603 TBC1D2Q9BYX2 928 aa13.29□□□□□ -0.28
CPNE8-204ENST00000546603 GPBP1L1Q9HC44 474 aaPredicted RBP13.29□□□□□ -0.28
CPNE8-204ENST00000546603 SLC6A16Q9GZN6 736 aa13.28□□□□□ -0.28
CPNE8-204ENST00000546603 FDX1P10109 184 aa13.27□□□□□ -0.29
CPNE8-204ENST00000546603 MOXD2PA6NHM9 499 aa13.26□□□□□ -0.29
CPNE8-204ENST00000546603 RNF19BQ6ZMZ0 732 aa13.26□□□□□ -0.29
CPNE8-204ENST00000546603 GJA5P36382 358 aa13.25□□□□□ -0.29
CPNE8-204ENST00000546603 GUCA2AQ02747 115 aa13.25□□□□□ -0.29
CPNE8-204ENST00000546603 S1PR4O95977 384 aa13.24□□□□□ -0.29
CPNE8-204ENST00000546603 NDUFV2P19404 249 aa13.24□□□□□ -0.29
CPNE8-204ENST00000546603 NEUROD2Q15784 382 aa13.24□□□□□ -0.29
CPNE8-204ENST00000546603 PRKCSHP14314 528 aaPredicted RBP13.23□□□□□ -0.29
CPNE8-204ENST00000546603 DDRGK1Q96HY6 314 aa13.23□□□□□ -0.29
CPNE8-204ENST00000546603 USB1Q9BQ65 265 aaKnown RBP13.23□□□□□ -0.29
CPNE8-204ENST00000546603 RSPH6AQ9H0K4 717 aa13.23□□□□□ -0.29
CPNE8-204ENST00000546603 MSS51Q4VC12 460 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms