RNA–Protein interactions for RNA: ENST00000546279.5

LMO3-233, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-233ENST00000546279 MED14O60244 1454 aa15.91■□□□□ 0.14
LMO3-233ENST00000546279 MYO5BQ9ULV0 1848 aa15.9■□□□□ 0.14
LMO3-233ENST00000546279 TRPM2O94759 1503 aa15.89■□□□□ 0.13
LMO3-233ENST00000546279 UGGT1Q9NYU2 1555 aa15.89■□□□□ 0.13
LMO3-233ENST00000546279 KDM5AP29375 1690 aaKnown RBP15.89■□□□□ 0.13
LMO3-233ENST00000546279 UBR1Q8IWV7 1749 aa15.88■□□□□ 0.13
LMO3-233ENST00000546279 CLTCL1P53675 1640 aa15.88■□□□□ 0.13
LMO3-233ENST00000546279 NLRP1Q9C000 1473 aa15.88■□□□□ 0.13
LMO3-233ENST00000546279 ACIN1Q9UKV3 1341 aaKnown RBP15.88■□□□□ 0.13
LMO3-233ENST00000546279 ALKQ9UM73 1620 aa15.87■□□□□ 0.13
LMO3-233ENST00000546279 MPHOSPH9Q99550 1183 aa15.87■□□□□ 0.13
LMO3-233ENST00000546279 PCGF6Q9BYE7 350 aa15.87■□□□□ 0.13
LMO3-233ENST00000546279 RGS17Q9UGC6 210 aaPredicted RBP15.87■□□□□ 0.13
LMO3-233ENST00000546279 TRIM52Q96A61 297 aa15.86■□□□□ 0.13
LMO3-233ENST00000546279 LRRC7Q96NW7 1537 aa15.84■□□□□ 0.13
LMO3-233ENST00000546279 TMEM131LA2VDJ0 1609 aa15.84■□□□□ 0.13
LMO3-233ENST00000546279 DHX57Q6P158 1386 aaKnown RBP15.83■□□□□ 0.12
LMO3-233ENST00000546279 ADGRB3O60242 1522 aa15.81■□□□□ 0.12
LMO3-233ENST00000546279 KIF1BO60333 1816 aa15.81■□□□□ 0.12
LMO3-233ENST00000546279 IQGAP1P46940 1657 aa15.81■□□□□ 0.12
LMO3-233ENST00000546279 ANKRD30BQ9BXX2 1392 aa15.81■□□□□ 0.12
LMO3-233ENST00000546279 HOXD11P31277 338 aaPredicted RBP15.8■□□□□ 0.12
LMO3-233ENST00000546279 IFT172Q9UG01 1749 aa15.78■□□□□ 0.12
LMO3-233ENST00000546279 IDI1Q13907 227 aa15.78■□□□□ 0.12
LMO3-233ENST00000546279 ARHGAP23Q9P227 1491 aa15.78■□□□□ 0.12
LMO3-233ENST00000546279 FAM135BQ49AJ0 1406 aa15.77■□□□□ 0.11
LMO3-233ENST00000546279 POTEAQ6S8J7 498 aa15.76■□□□□ 0.11
LMO3-233ENST00000546279 SLIT1O75093 1534 aa15.76■□□□□ 0.11
LMO3-233ENST00000546279 SPATA31E1Q6ZUB1 1445 aa15.75■□□□□ 0.11
LMO3-233ENST00000546279 SLC52A1Q9NWF4 448 aa15.74■□□□□ 0.11
LMO3-233ENST00000546279 STRCP1A6NGW2 1772 aa15.74■□□□□ 0.11
LMO3-233ENST00000546279 PPLO60437 1756 aa15.74■□□□□ 0.11
LMO3-233ENST00000546279 ZFYVE9O95405 1425 aa15.73■□□□□ 0.11
LMO3-233ENST00000546279 NEXMIFQ5QGS0 1516 aa15.72■□□□□ 0.11
LMO3-233ENST00000546279 SCAF11Q99590 1463 aaKnown RBP15.71■□□□□ 0.1
LMO3-233ENST00000546279 TXNDC2Q86VQ3 553 aa15.7■□□□□ 0.1
LMO3-233ENST00000546279 EID1Q9Y6B2 187 aa15.7■□□□□ 0.1
LMO3-233ENST00000546279 CCDC144AA2RUR9 1427 aa15.69■□□□□ 0.1
LMO3-233ENST00000546279 TMEM2Q9UHN6 1383 aa15.67■□□□□ 0.1
LMO3-233ENST00000546279 NRXN3Q9Y4C0 1643 aa15.67■□□□□ 0.1
LMO3-233ENST00000546279 SETD1AO15047 1707 aaKnown RBP15.65■□□□□ 0.1
LMO3-233ENST00000546279 LTKP29376 864 aa15.65■□□□□ 0.1
LMO3-233ENST00000546279 TMEM94Q12767 1356 aa15.63■□□□□ 0.09
LMO3-233ENST00000546279 RIMS2Q9UQ26 1411 aa15.63■□□□□ 0.09
LMO3-233ENST00000546279 KCNA6P17658 529 aa15.62■□□□□ 0.09
LMO3-233ENST00000546279 PROSER2Q86WR7 435 aaPredicted RBP15.62■□□□□ 0.09
LMO3-233ENST00000546279 NRXN1Q9ULB1 1477 aa15.62■□□□□ 0.09
LMO3-233ENST00000546279 SIN3AQ96ST3 1273 aa15.61■□□□□ 0.09
LMO3-233ENST00000546279 JCADQ9P266 1359 aa15.61■□□□□ 0.09
LMO3-233ENST00000546279 XIRP1Q702N8 1843 aaKnown RBP15.6■□□□□ 0.09
LMO3-233ENST00000546279 UPF1Q92900 1129 aaKnown RBP eCLIP15.6■□□□□ 0.09
LMO3-233ENST00000546279 SETBP1Q9Y6X0 1596 aa15.6■□□□□ 0.09
LMO3-233ENST00000546279 ZNF772Q68DY9 489 aaPredicted RBP15.59■□□□□ 0.09
LMO3-233ENST00000546279 STAG3Q9UJ98 1225 aa15.59■□□□□ 0.09
LMO3-233ENST00000546279 ROBO1Q9Y6N7 1651 aa15.59■□□□□ 0.09
LMO3-233ENST00000546279 MYOM2P54296 1465 aa15.59■□□□□ 0.09
LMO3-233ENST00000546279 SLAIN2Q9P270 581 aa15.57■□□□□ 0.08
LMO3-233ENST00000546279 CLSPNQ9HAW4 1339 aa15.57■□□□□ 0.08
LMO3-233ENST00000546279 MSH6P52701 1360 aa15.57■□□□□ 0.08
LMO3-233ENST00000546279 ADAMTS13Q76LX8 1427 aa15.57■□□□□ 0.08
LMO3-233ENST00000546279 RPGRIP1LQ68CZ1 1315 aa15.56■□□□□ 0.08
LMO3-233ENST00000546279 PLEKHG1Q9ULL1 1385 aa15.56■□□□□ 0.08
LMO3-233ENST00000546279 CHD2O14647 1828 aaKnown RBP15.55■□□□□ 0.08
LMO3-233ENST00000546279 SPATA31A6Q5VVP1 1343 aa15.55■□□□□ 0.08
LMO3-233ENST00000546279 CHGAP10645 457 aaKnown RBP15.55■□□□□ 0.08
LMO3-233ENST00000546279 MEX3CQ5U5Q3 659 aaKnown RBP15.55■□□□□ 0.08
LMO3-233ENST00000546279 ASXL1Q8IXJ9 1541 aa15.54■□□□□ 0.08
LMO3-233ENST00000546279 DIP2AQ14689 1571 aa15.53■□□□□ 0.08
LMO3-233ENST00000546279 PIK3C2GO75747 1445 aa15.53■□□□□ 0.08
LMO3-233ENST00000546279 ADGRF5Q8IZF2 1346 aa15.53■□□□□ 0.08
LMO3-233ENST00000546279 NKTRP30414 1462 aaKnown RBP15.52■□□□□ 0.08
LMO3-233ENST00000546279 KIAA1210Q9ULL0 1709 aa15.52■□□□□ 0.08
LMO3-233ENST00000546279 RGL3Q3MIN7 710 aa15.52■□□□□ 0.08
LMO3-233ENST00000546279 SLC26A8Q96RN1 970 aa15.52■□□□□ 0.08
LMO3-233ENST00000546279 NWD1Q149M9 1564 aa15.51■□□□□ 0.07
LMO3-233ENST00000546279 RXRBP28702 533 aa15.51■□□□□ 0.07
LMO3-233ENST00000546279 NUTM2DQ5VT03 806 aaPredicted RBP15.51■□□□□ 0.07
LMO3-233ENST00000546279 PHLPP1O60346 1717 aa15.51■□□□□ 0.07
LMO3-233ENST00000546279 LAMC1P11047 1609 aa15.5■□□□□ 0.07
LMO3-233ENST00000546279 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.5■□□□□ 0.07
LMO3-233ENST00000546279 L3MBTL2Q969R5 705 aa15.5■□□□□ 0.07
LMO3-233ENST00000546279 RBM33Q96EV2 1170 aaKnown RBP15.5■□□□□ 0.07
LMO3-233ENST00000546279 XRN1Q8IZH2 1706 aaKnown RBP15.5■□□□□ 0.07
LMO3-233ENST00000546279 ZNF326Q5BKZ1 582 aaKnown RBP15.49■□□□□ 0.07
LMO3-233ENST00000546279 BCANQ96GW7 911 aa15.49■□□□□ 0.07
LMO3-233ENST00000546279 TRPM1Q7Z4N2 1603 aa15.49■□□□□ 0.07
LMO3-233ENST00000546279 ADGRB1O14514 1584 aa15.49■□□□□ 0.07
LMO3-233ENST00000546279 PRAG1Q86YV5 1406 aa15.48■□□□□ 0.07
LMO3-233ENST00000546279 ZBTB22O15209 634 aa15.47■□□□□ 0.07
LMO3-233ENST00000546279 CDK12Q9NYV4 1490 aaPredicted RBP15.46■□□□□ 0.07
LMO3-233ENST00000546279 PTPRUQ92729 1446 aa15.46■□□□□ 0.07
LMO3-233ENST00000546279 NCOA3Q9Y6Q9 1424 aa15.46■□□□□ 0.07
LMO3-233ENST00000546279 VGFO15240 615 aaPredicted RBP15.46■□□□□ 0.07
LMO3-233ENST00000546279 HDGFP51858 240 aaKnown RBP15.46■□□□□ 0.07
LMO3-233ENST00000546279 NEUROD1Q13562 356 aa15.46■□□□□ 0.07
LMO3-233ENST00000546279 KNDC1Q76NI1 1749 aa15.46■□□□□ 0.06
LMO3-233ENST00000546279 DCAF8L1A6NGE4 600 aa15.45■□□□□ 0.06
LMO3-233ENST00000546279 CCER1Q8TC90 406 aaPredicted RBP15.45■□□□□ 0.06
LMO3-233ENST00000546279 DCAF11Q8TEB1 546 aa15.44■□□□□ 0.06
LMO3-233ENST00000546279 STAC3Q96MF2 364 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms