RNA–Protein interactions for RNA: ENST00000546088.5

TAF1D-222, Transcript of TATA-box binding protein associated factor, RNA polymerase I subunit D, human

TSL 3

Gene TAF1D, Length 1,728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TAF1D-222	ENST00000546088	SOWAHB	A6NEL2	793 aa		10.54	□□□□□ -0.72
TAF1D-222	ENST00000546088	PROX2	Q3B8N5	592 aa		10.54	□□□□□ -0.72
TAF1D-222	ENST00000546088	KIF21B	O75037	1637 aa		10.54	□□□□□ -0.72
TAF1D-222	ENST00000546088	BCAM	P50895	628 aa		10.53	□□□□□ -0.72
TAF1D-222	ENST00000546088	MAP3K9	P80192	1104 aa		10.53	□□□□□ -0.72
TAF1D-222	ENST00000546088	PCDHGA10	Q9Y5H3	936 aa		10.53	□□□□□ -0.72
TAF1D-222	ENST00000546088	DISP1	Q96F81	1524 aa		10.51	□□□□□ -0.73
TAF1D-222	ENST00000546088	COL9A1	P20849	921 aa		10.51	□□□□□ -0.73
TAF1D-222	ENST00000546088	GOLGA3	Q08378	1498 aa		10.51	□□□□□ -0.73
TAF1D-222	ENST00000546088	KCNC4	Q03721	635 aa		10.5	□□□□□ -0.73
TAF1D-222	ENST00000546088	LOC105371045	A0A1W2PR82	267 aa		10.5	□□□□□ -0.73
TAF1D-222	ENST00000546088	DDX27	Q96GQ7	796 aa	Known RBP	10.5	□□□□□ -0.73
TAF1D-222	ENST00000546088	CARMIL2	Q6F5E8	1435 aa		10.5	□□□□□ -0.73
TAF1D-222	ENST00000546088	UGGT2	Q9NYU1	1516 aa		10.49	□□□□□ -0.73
TAF1D-222	ENST00000546088	ONECUT3	O60422	494 aa	Predicted RBP	10.49	□□□□□ -0.73
TAF1D-222	ENST00000546088	FBXW7	Q969H0	707 aa		10.49	□□□□□ -0.73
TAF1D-222	ENST00000546088	ZFR	Q96KR1	1074 aa	Known RBP	10.49	□□□□□ -0.73
TAF1D-222	ENST00000546088	LARP6	Q9BRS8	491 aa	Known RBP	10.49	□□□□□ -0.73
TAF1D-222	ENST00000546088	KIAA0556	O60303	1618 aa		10.49	□□□□□ -0.73
TAF1D-222	ENST00000546088	LAPTM4A	Q15012	233 aa		10.48	□□□□□ -0.73
TAF1D-222	ENST00000546088	PTPRG	P23470	1445 aa		10.48	□□□□□ -0.73
TAF1D-222	ENST00000546088	MFSD10	Q14728	455 aa		10.47	□□□□□ -0.73
TAF1D-222	ENST00000546088	TYW1B	Q6NUM6	668 aa		10.47	□□□□□ -0.73
TAF1D-222	ENST00000546088	WBP1L	Q9NX94	342 aa		10.47	□□□□□ -0.73
TAF1D-222	ENST00000546088	ARID3C	A6NKF2	412 aa		10.47	□□□□□ -0.73
TAF1D-222	ENST00000546088	KIAA1468	Q9P260	1216 aa		10.47	□□□□□ -0.73
TAF1D-222	ENST00000546088	TNIK	Q9UKE5	1360 aa		10.47	□□□□□ -0.73
TAF1D-222	ENST00000546088	PHF14	O94880	888 aa		10.46	□□□□□ -0.74
TAF1D-222	ENST00000546088	EMILIN3	Q9NT22	766 aa		10.45	□□□□□ -0.74
TAF1D-222	ENST00000546088	FHOD3	Q2V2M9	1422 aa		10.44	□□□□□ -0.74
TAF1D-222	ENST00000546088	ADCY10	Q96PN6	1610 aa		10.43	□□□□□ -0.74
TAF1D-222	ENST00000546088	PLB1	Q6P1J6	1458 aa		10.42	□□□□□ -0.74
TAF1D-222	ENST00000546088	SAMD9	Q5K651	1589 aa		10.42	□□□□□ -0.74
TAF1D-222	ENST00000546088	LCE2B	O14633	110 aa		10.4	□□□□□ -0.74
TAF1D-222	ENST00000546088	FAM98C	Q17RN3	349 aa	Known RBP	10.4	□□□□□ -0.74
TAF1D-222	ENST00000546088	SEPT9	Q9UHD8	586 aa	Predicted RBP	10.4	□□□□□ -0.74
TAF1D-222	ENST00000546088	TSR3	Q9UJK0	312 aa	Known RBP	10.4	□□□□□ -0.74
TAF1D-222	ENST00000546088	ATP1B4	Q9UN42	357 aa	Predicted RBP	10.4	□□□□□ -0.74
TAF1D-222	ENST00000546088	UACA	Q9BZF9	1416 aa		10.4	□□□□□ -0.75
TAF1D-222	ENST00000546088	TRAF7	Q6Q0C0	670 aa		10.39	□□□□□ -0.75
TAF1D-222	ENST00000546088	TRIM6-TRIM34	B2RNG4	842 aa		10.38	□□□□□ -0.75
TAF1D-222	ENST00000546088	GTPBP6	O43824	516 aa	Predicted RBP	10.38	□□□□□ -0.75
TAF1D-222	ENST00000546088	C6orf132	Q5T0Z8	1188 aa		10.38	□□□□□ -0.75
TAF1D-222	ENST00000546088	EPAS1	Q99814	870 aa		10.38	□□□□□ -0.75
TAF1D-222	ENST00000546088	ARHGAP35	Q9NRY4	1499 aa		10.38	□□□□□ -0.75
TAF1D-222	ENST00000546088	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	10.38	□□□□□ -0.75
TAF1D-222	ENST00000546088	GFRA3	O60609	400 aa		10.37	□□□□□ -0.75
TAF1D-222	ENST00000546088	HPS5	Q9UPZ3	1129 aa		10.37	□□□□□ -0.75
TAF1D-222	ENST00000546088	ABCC2	Q92887	1545 aa		10.36	□□□□□ -0.75
TAF1D-222	ENST00000546088	LRCH3	Q96II8	777 aa		10.36	□□□□□ -0.75
TAF1D-222	ENST00000546088	EFCAB5	A4FU69	1503 aa		10.36	□□□□□ -0.75
TAF1D-222	ENST00000546088	ABCA8	O94911	1581 aa		10.35	□□□□□ -0.75
TAF1D-222	ENST00000546088	CLIP1	P30622	1438 aa		10.35	□□□□□ -0.75
TAF1D-222	ENST00000546088	ZCCHC11	Q5TAX3	1644 aa	Known RBP	10.34	□□□□□ -0.75
TAF1D-222	ENST00000546088	RAPGEF6	Q8TEU7	1601 aa		10.33	□□□□□ -0.76
TAF1D-222	ENST00000546088	CEP162	Q5TB80	1403 aa		10.33	□□□□□ -0.76
TAF1D-222	ENST00000546088	UHRF1BP1L	A0JNW5	1464 aa		10.32	□□□□□ -0.76
TAF1D-222	ENST00000546088	FAM69C	Q0P6D2	419 aa		10.32	□□□□□ -0.76
TAF1D-222	ENST00000546088	ASXL2	Q76L83	1435 aa		10.31	□□□□□ -0.76
TAF1D-222	ENST00000546088	KDM5B	Q9UGL1	1544 aa		10.3	□□□□□ -0.76
TAF1D-222	ENST00000546088	ATP10B	O94823	1461 aa		10.3	□□□□□ -0.76
TAF1D-222	ENST00000546088	NRG2	O14511	850 aa	Predicted RBP	10.3	□□□□□ -0.76
TAF1D-222	ENST00000546088	NUP153	P49790	1475 aa	Known RBP	10.29	□□□□□ -0.76
TAF1D-222	ENST00000546088	KIF13A	Q9H1H9	1805 aa		10.29	□□□□□ -0.76
TAF1D-222	ENST00000546088	CDK13	Q14004	1512 aa	Known RBP	10.29	□□□□□ -0.76
TAF1D-222	ENST00000546088	TSPOAP1	O95153	1857 aa		10.28	□□□□□ -0.76
TAF1D-222	ENST00000546088	MAPKBP1	O60336	1514 aa		10.28	□□□□□ -0.76
TAF1D-222	ENST00000546088	CAMK2B	Q13554	666 aa		10.28	□□□□□ -0.76
TAF1D-222	ENST00000546088	TJAP1	Q5JTD0	557 aa		10.28	□□□□□ -0.76
TAF1D-222	ENST00000546088	PRKD2	Q9BZL6	878 aa		10.28	□□□□□ -0.76
TAF1D-222	ENST00000546088	FMN1	Q68DA7	1419 aa		10.28	□□□□□ -0.76
TAF1D-222	ENST00000546088	PPP4C	P60510	307 aa		10.27	□□□□□ -0.76
TAF1D-222	ENST00000546088	PCF11	O94913	1555 aa	Known RBP	10.27	□□□□□ -0.76
TAF1D-222	ENST00000546088	DIP2B	Q9P265	1576 aa		10.27	□□□□□ -0.77
TAF1D-222	ENST00000546088	PACS2	Q86VP3	889 aa		10.27	□□□□□ -0.77
TAF1D-222	ENST00000546088	RBM33	Q96EV2	1170 aa	Known RBP	10.27	□□□□□ -0.77
TAF1D-222	ENST00000546088		V9GY48	417 aa	Predicted RBP	10.27	□□□□□ -0.77
TAF1D-222	ENST00000546088	ABCC10	Q5T3U5	1492 aa		10.26	□□□□□ -0.77
TAF1D-222	ENST00000546088	LRRIQ1	Q96JM4	1722 aa		10.26	□□□□□ -0.77
TAF1D-222	ENST00000546088	TSKS	Q9UJT2	592 aa		10.25	□□□□□ -0.77
TAF1D-222	ENST00000546088	WDR7	Q9Y4E6	1490 aa		10.25	□□□□□ -0.77
TAF1D-222	ENST00000546088	HECW1	Q76N89	1606 aa		10.24	□□□□□ -0.77
TAF1D-222	ENST00000546088	DPYSL4	O14531	572 aa		10.24	□□□□□ -0.77
TAF1D-222	ENST00000546088	CADPS2	Q86UW7	1296 aa		10.24	□□□□□ -0.77
TAF1D-222	ENST00000546088	EPRS	P07814	1512 aa	Known RBP	10.23	□□□□□ -0.77
TAF1D-222	ENST00000546088	PLEKHD1	A6NEE1	506 aa		10.22	□□□□□ -0.77
TAF1D-222	ENST00000546088	PPP1R18	Q6NYC8	613 aa		10.22	□□□□□ -0.77
TAF1D-222	ENST00000546088	IL21	Q9HBE4	155 aa		10.22	□□□□□ -0.77
TAF1D-222	ENST00000546088	CASKIN1	Q8WXD9	1431 aa		10.21	□□□□□ -0.77
TAF1D-222	ENST00000546088	EN1	Q05925	392 aa	Predicted RBP	10.21	□□□□□ -0.78
TAF1D-222	ENST00000546088	DDX12P	Q92771	950 aa		10.21	□□□□□ -0.78
TAF1D-222	ENST00000546088	MTR	Q99707	1265 aa		10.21	□□□□□ -0.78
TAF1D-222	ENST00000546088	SAMD7	Q7Z3H4	446 aa		10.19	□□□□□ -0.78
TAF1D-222	ENST00000546088	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	10.19	□□□□□ -0.78
TAF1D-222	ENST00000546088	FYCO1	Q9BQS8	1478 aa		10.18	□□□□□ -0.78
TAF1D-222	ENST00000546088	TSR1	Q2NL82	804 aa	Known RBP	10.18	□□□□□ -0.78
TAF1D-222	ENST00000546088	ZNF787	Q6DD87	383 aa		10.18	□□□□□ -0.78
TAF1D-222	ENST00000546088	MAGI3	Q5TCQ9	1506 aa		10.17	□□□□□ -0.78
TAF1D-222	ENST00000546088	MAP3K7	O43318	606 aa		10.17	□□□□□ -0.78
TAF1D-222	ENST00000546088	PPRC1	Q5VV67	1664 aa	Known RBP	10.17	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 67 ms