RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 RPRD2Q5VT52 1461 aaKnown RBP8.88□□□□□ -0.99
SNHG1-225ENST00000545920 TARBP1Q13395 1621 aaKnown RBP8.87□□□□□ -0.99
SNHG1-225ENST00000545920 ERBB3P21860 1342 aa8.87□□□□□ -0.99
SNHG1-225ENST00000545920 WDR62O43379 1518 aa8.87□□□□□ -0.99
SNHG1-225ENST00000545920 E2F4Q16254 413 aa8.87□□□□□ -0.99
SNHG1-225ENST00000545920 NESP48681 1621 aa8.87□□□□□ -0.99
SNHG1-225ENST00000545920 TDRD9Q8NDG6 1382 aaKnown RBP8.86□□□□□ -0.99
SNHG1-225ENST00000545920 EFCAB3Q8N7B9 438 aa8.86□□□□□ -0.99
SNHG1-225ENST00000545920 ANKRD30BQ9BXX2 1392 aa8.86□□□□□ -0.99
SNHG1-225ENST00000545920 ZBED9Q6R2W3 1325 aa8.85□□□□□ -0.99
SNHG1-225ENST00000545920 TESPA1A2RU30 521 aaPredicted RBP8.85□□□□□ -0.99
SNHG1-225ENST00000545920 RIMBP2O15034 1052 aa8.85□□□□□ -0.99
SNHG1-225ENST00000545920 HSPA5P11021 654 aaKnown RBP8.85□□□□□ -0.99
SNHG1-225ENST00000545920 MPHOSPH9Q99550 1183 aa8.85□□□□□ -0.99
SNHG1-225ENST00000545920 RBM19Q9Y4C8 960 aaKnown RBP8.85□□□□□ -0.99
SNHG1-225ENST00000545920 ADAMTS12P58397 1594 aa8.85□□□□□ -0.99
SNHG1-225ENST00000545920 CCDC7Q96M83 1385 aa8.85□□□□□ -0.99
SNHG1-225ENST00000545920 KIAA0586Q9BVV6 1533 aa8.85□□□□□ -0.99
SNHG1-225ENST00000545920 WASHC2AQ641Q2 1341 aa8.84□□□□□ -0.99
SNHG1-225ENST00000545920 DAPK1P53355 1430 aa8.84□□□□□ -0.99
SNHG1-225ENST00000545920 ZC3H15Q8WU90 426 aaKnown RBP8.84□□□□□ -0.99
SNHG1-225ENST00000545920 PPP4R2Q9NY27 417 aa8.84□□□□□ -0.99
SNHG1-225ENST00000545920 MAGI3Q5TCQ9 1506 aa8.84□□□□□ -0.99
SNHG1-225ENST00000545920 ROCK2O75116 1388 aaKnown RBP8.84□□□□□ -0.99
SNHG1-225ENST00000545920 DNMT1P26358 1616 aaKnown RBP8.83□□□□□ -1
SNHG1-225ENST00000545920 LRRIQ1Q96JM4 1722 aa8.83□□□□□ -1
SNHG1-225ENST00000545920 SPATA31E1Q6ZUB1 1445 aa8.83□□□□□ -1
SNHG1-225ENST00000545920 BRPF1P55201 1214 aaPredicted RBP8.83□□□□□ -1
SNHG1-225ENST00000545920 ZSWIM6Q9HCJ5 1215 aa8.83□□□□□ -1
SNHG1-225ENST00000545920 PHF8Q9UPP1 1060 aa8.83□□□□□ -1
SNHG1-225ENST00000545920 KTN1Q86UP2 1357 aaKnown RBP8.83□□□□□ -1
SNHG1-225ENST00000545920 DENND4BO75064 1496 aaPredicted RBP8.83□□□□□ -1
SNHG1-225ENST00000545920 ADGRL2O95490 1459 aa8.83□□□□□ -1
SNHG1-225ENST00000545920 IFT140Q96RY7 1462 aa8.83□□□□□ -1
SNHG1-225ENST00000545920 HNRNPUQ00839 825 aaKnown RBP eCLIP8.82□□□□□ -1
SNHG1-225ENST00000545920 TRIM52Q96A61 297 aa8.82□□□□□ -1
SNHG1-225ENST00000545920 PRKRIP1Q9H875 184 aaPredicted RBP8.82□□□□□ -1
SNHG1-225ENST00000545920 ARIH1Q9Y4X5 557 aaPredicted RBP8.82□□□□□ -1
SNHG1-225ENST00000545920 TEX14Q8IWB6 1497 aa8.82□□□□□ -1
SNHG1-225ENST00000545920 MRC2Q9UBG0 1479 aa8.82□□□□□ -1
SNHG1-225ENST00000545920 VARS2Q5ST30 1063 aaKnown RBP8.81□□□□□ -1
SNHG1-225ENST00000545920 RNF166Q96A37 237 aaPredicted RBP8.81□□□□□ -1
SNHG1-225ENST00000545920 PBRM1Q86U86 1689 aa8.81□□□□□ -1
SNHG1-225ENST00000545920 NCKAP5LQ9HCH0 1330 aa8.8□□□□□ -1
SNHG1-225ENST00000545920 MFSD10Q14728 455 aa8.8□□□□□ -1
SNHG1-225ENST00000545920 L3MBTL2Q969R5 705 aa8.8□□□□□ -1
SNHG1-225ENST00000545920 ABCC5O15440 1437 aa8.8□□□□□ -1
SNHG1-225ENST00000545920 SEMA3EO15041 775 aa8.79□□□□□ -1
SNHG1-225ENST00000545920 MICALL2Q8IY33 904 aa8.79□□□□□ -1
SNHG1-225ENST00000545920 POLR1AO95602 1720 aaPredicted RBP8.79□□□□□ -1
SNHG1-225ENST00000545920 TROQ12816 1431 aaPredicted RBP8.79□□□□□ -1
SNHG1-225ENST00000545920 SHANK2Q9UPX8 1470 aa8.78□□□□□ -1
SNHG1-225ENST00000545920 ZNF687Q8N1G0 1237 aa8.78□□□□□ -1
SNHG1-225ENST00000545920 RRP7BPQ9NSQ0 103 aa8.78□□□□□ -1
SNHG1-225ENST00000545920 KIAA0556O60303 1618 aa8.78□□□□□ -1
SNHG1-225ENST00000545920 ARHGEF12Q9NZN5 1544 aa8.78□□□□□ -1
SNHG1-225ENST00000545920 UHRF1BP1Q6BDS2 1440 aa8.78□□□□□ -1
SNHG1-225ENST00000545920 SMG6Q86US8 1419 aaKnown RBP8.78□□□□□ -1
SNHG1-225ENST00000545920 KIAA1107Q9UPP5 1409 aa8.78□□□□□ -1
SNHG1-225ENST00000545920 MBD5Q9P267 1494 aa8.77□□□□□ -1
SNHG1-225ENST00000545920 PDE4AP27815 886 aa8.77□□□□□ -1.01
SNHG1-225ENST00000545920 TMEM92Q6UXU6 159 aa8.77□□□□□ -1.01
SNHG1-225ENST00000545920 MS4A4AQ96JQ5 239 aa8.77□□□□□ -1.01
SNHG1-225ENST00000545920 CRISPLD2Q9H0B8 497 aa8.77□□□□□ -1.01
SNHG1-225ENST00000545920 ITSN2Q9NZM3 1697 aa8.77□□□□□ -1.01
SNHG1-225ENST00000545920 ADCY10Q96PN6 1610 aa8.76□□□□□ -1.01
SNHG1-225ENST00000545920 INSRP06213 1382 aa8.76□□□□□ -1.01
SNHG1-225ENST00000545920 GPR153Q6NV75 609 aa8.76□□□□□ -1.01
SNHG1-225ENST00000545920 RNF123Q5XPI4 1314 aa8.76□□□□□ -1.01
SNHG1-225ENST00000545920 NUP153P49790 1475 aaKnown RBP8.76□□□□□ -1.01
SNHG1-225ENST00000545920 RAPGEF6Q8TEU7 1601 aa8.76□□□□□ -1.01
SNHG1-225ENST00000545920 CDK13Q14004 1512 aaKnown RBP8.75□□□□□ -1.01
SNHG1-225ENST00000545920 DISP1Q96F81 1524 aa8.75□□□□□ -1.01
SNHG1-225ENST00000545920 ANKRD30AQ9BXX3 1397 aa8.75□□□□□ -1.01
SNHG1-225ENST00000545920 ZMYND10O75800 440 aa8.75□□□□□ -1.01
SNHG1-225ENST00000545920 CAMK2BQ13554 666 aa8.75□□□□□ -1.01
SNHG1-225ENST00000545920 HIRIP3Q9BW71 556 aaPredicted RBP8.75□□□□□ -1.01
SNHG1-225ENST00000545920 MRS2Q9HD23 443 aa8.75□□□□□ -1.01
SNHG1-225ENST00000545920 MAGI1Q96QZ7 1491 aaPredicted RBP8.75□□□□□ -1.01
SNHG1-225ENST00000545920 ADGBQ8N7X0 1667 aa8.75□□□□□ -1.01
SNHG1-225ENST00000545920 KDM5DQ9BY66 1539 aa8.75□□□□□ -1.01
SNHG1-225ENST00000545920 PTGER2P43116 358 aa8.74□□□□□ -1.01
SNHG1-225ENST00000545920 ARXQ96QS3 562 aa8.74□□□□□ -1.01
SNHG1-225ENST00000545920 LARP6Q9BRS8 491 aaKnown RBP8.74□□□□□ -1.01
SNHG1-225ENST00000545920 PZPP20742 1482 aa8.74□□□□□ -1.01
SNHG1-225ENST00000545920 KIF7Q2M1P5 1343 aa8.74□□□□□ -1.01
SNHG1-225ENST00000545920 ZMYM4Q5VZL5 1548 aa8.74□□□□□ -1.01
SNHG1-225ENST00000545920 CARMIL2Q6F5E8 1435 aa8.73□□□□□ -1.01
SNHG1-225ENST00000545920 GRIN2AQ12879 1464 aa8.73□□□□□ -1.01
SNHG1-225ENST00000545920 RALGAPBQ86X10 1494 aa8.73□□□□□ -1.01
SNHG1-225ENST00000545920 SMYD5Q6GMV2 418 aa8.73□□□□□ -1.01
SNHG1-225ENST00000545920 CHIC2Q9UKJ5 165 aa8.73□□□□□ -1.01
SNHG1-225ENST00000545920 KDM6BO15054 1643 aa8.72□□□□□ -1.01
SNHG1-225ENST00000545920 KIF14Q15058 1648 aa8.72□□□□□ -1.01
SNHG1-225ENST00000545920 CAMSAP2Q08AD1 1489 aa8.72□□□□□ -1.01
SNHG1-225ENST00000545920 RSPH4AQ5TD94 716 aa8.72□□□□□ -1.01
SNHG1-225ENST00000545920 SLC24A3Q9HC58 644 aa8.72□□□□□ -1.01
SNHG1-225ENST00000545920 DHX29Q7Z478 1369 aaKnown RBP8.72□□□□□ -1.01
SNHG1-225ENST00000545920 GPATCH8Q9UKJ3 1502 aaKnown RBP8.71□□□□□ -1.01
SNHG1-225ENST00000545920 RALBP1Q15311 655 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms