RNA–Protein interactions for RNA: ENST00000545868.4

GABRB3-205, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 1,267 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-205ENST00000545868 LRRC7Q96NW7 1537 aa15.22■□□□□ 0.03
GABRB3-205ENST00000545868 ARHGAP31Q2M1Z3 1444 aa15.21■□□□□ 0.03
GABRB3-205ENST00000545868 FGD6Q6ZV73 1430 aa15.2■□□□□ 0.02
GABRB3-205ENST00000545868 HSPA1LP34931 641 aa15.19■□□□□ 0.02
GABRB3-205ENST00000545868 SCAF11Q99590 1463 aaKnown RBP15.19■□□□□ 0.02
GABRB3-205ENST00000545868 DSG3P32926 999 aa15.18■□□□□ 0.02
GABRB3-205ENST00000545868 LMTK2Q8IWU2 1503 aa15.17■□□□□ 0.02
GABRB3-205ENST00000545868 PIP4K2BP78356 416 aa15.17■□□□□ 0.02
GABRB3-205ENST00000545868 EFCAB6Q5THR3 1501 aa15.17■□□□□ 0.02
GABRB3-205ENST00000545868 RRP7BPQ9NSQ0 103 aa15.16■□□□□ 0.02
GABRB3-205ENST00000545868 ZBTB12Q9Y330 459 aaPredicted RBP15.16■□□□□ 0.02
GABRB3-205ENST00000545868 LTKP29376 864 aa15.15■□□□□ 0.02
GABRB3-205ENST00000545868 GCC2Q8IWJ2 1684 aa15.15■□□□□ 0.02
GABRB3-205ENST00000545868 TOM1O60784 492 aa15.14■□□□□ 0.01
GABRB3-205ENST00000545868 ADGRL2O95490 1459 aa15.14■□□□□ 0.01
GABRB3-205ENST00000545868 PROM2Q8N271 834 aa15.12■□□□□ 0.01
GABRB3-205ENST00000545868 TET3O43151 1660 aa15.12■□□□□ 0.01
GABRB3-205ENST00000545868 ADGRB3O60242 1522 aa15.12■□□□□ 0.01
GABRB3-205ENST00000545868 RTN4Q9NQC3 1192 aaKnown RBP15.11■□□□□ 0.01
GABRB3-205ENST00000545868 NOS1P29475 1434 aa15.1■□□□□ 0.01
GABRB3-205ENST00000545868 AMER1Q5JTC6 1135 aaPredicted RBP15.1■□□□□ 0.01
GABRB3-205ENST00000545868 CHIC2Q9UKJ5 165 aa15.1■□□□□ 0.01
GABRB3-205ENST00000545868 CHD2O14647 1828 aaKnown RBP15.1■□□□□ 0.01
GABRB3-205ENST00000545868 ANKRD30AQ9BXX3 1397 aa15.1■□□□□ 0.01
GABRB3-205ENST00000545868 TMEM2Q9UHN6 1383 aa15.1■□□□□ 0.01
GABRB3-205ENST00000545868 UNC13BO14795 1591 aa15.09■□□□□ 0.01
GABRB3-205ENST00000545868 NWD1Q149M9 1564 aa15.09■□□□□ 0.01
GABRB3-205ENST00000545868 E9PCH4 1651 aa15.09■□□□□ 0.01
GABRB3-205ENST00000545868 TXNDC2Q86VQ3 553 aa15.08■□□□□ 0
GABRB3-205ENST00000545868 KANK1Q14678 1352 aa15.07■□□□□ 0
GABRB3-205ENST00000545868 TMEM131LA2VDJ0 1609 aa15.06■□□□□ 0
GABRB3-205ENST00000545868 ROBO1Q9Y6N7 1651 aa15.06■□□□□ 0
GABRB3-205ENST00000545868 IDI1Q13907 227 aa15.05■□□□□ -0
GABRB3-205ENST00000545868 IQGAP3Q86VI3 1631 aa15.03■□□□□ -0
GABRB3-205ENST00000545868 RPRD2Q5VT52 1461 aaKnown RBP15.02■□□□□ -0
GABRB3-205ENST00000545868 ANKRD50Q9ULJ7 1429 aa15.02■□□□□ -0
GABRB3-205ENST00000545868 ZFYVE9O95405 1425 aa15.01□□□□□ -0.01
GABRB3-205ENST00000545868 EID1Q9Y6B2 187 aa15.01□□□□□ -0.01
GABRB3-205ENST00000545868 TMEM94Q12767 1356 aa14.99□□□□□ -0.01
GABRB3-205ENST00000545868 CACNB1Q02641 598 aaPredicted RBP14.99□□□□□ -0.01
GABRB3-205ENST00000545868 NKTRP30414 1462 aaKnown RBP14.99□□□□□ -0.01
GABRB3-205ENST00000545868 PHLPP1O60346 1717 aa14.98□□□□□ -0.01
GABRB3-205ENST00000545868 FAM50AQ14320 339 aaKnown RBP14.98□□□□□ -0.01
GABRB3-205ENST00000545868 SLC26A8Q96RN1 970 aa14.98□□□□□ -0.01
GABRB3-205ENST00000545868 STAG3Q9UJ98 1225 aa14.98□□□□□ -0.01
GABRB3-205ENST00000545868 FBXO3Q9UK99 471 aa14.98□□□□□ -0.01
GABRB3-205ENST00000545868 SPHKAPQ2M3C7 1700 aa14.97□□□□□ -0.01
GABRB3-205ENST00000545868 FAM135BQ49AJ0 1406 aa14.96□□□□□ -0.01
GABRB3-205ENST00000545868 RBM33Q96EV2 1170 aaKnown RBP14.96□□□□□ -0.01
GABRB3-205ENST00000545868 KCNA6P17658 529 aa14.95□□□□□ -0.02
GABRB3-205ENST00000545868 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.95□□□□□ -0.02
GABRB3-205ENST00000545868 RIMS2Q9UQ26 1411 aa14.94□□□□□ -0.02
GABRB3-205ENST00000545868 SLC52A1Q9NWF4 448 aa14.94□□□□□ -0.02
GABRB3-205ENST00000545868 RGS17Q9UGC6 210 aaPredicted RBP14.94□□□□□ -0.02
GABRB3-205ENST00000545868 NRXN3Q9Y4C0 1643 aa14.94□□□□□ -0.02
GABRB3-205ENST00000545868 PLEKHG1Q9ULL1 1385 aa14.93□□□□□ -0.02
GABRB3-205ENST00000545868 COL16A1Q07092 1604 aaPredicted RBP14.92□□□□□ -0.02
GABRB3-205ENST00000545868 SETD1AO15047 1707 aaKnown RBP14.92□□□□□ -0.02
GABRB3-205ENST00000545868 DIP2AQ14689 1571 aa14.91□□□□□ -0.02
GABRB3-205ENST00000545868 ROCK1Q13464 1354 aa14.91□□□□□ -0.02
GABRB3-205ENST00000545868 ADAMTS13Q76LX8 1427 aa14.91□□□□□ -0.02
GABRB3-205ENST00000545868 PROSER2Q86WR7 435 aaPredicted RBP14.9□□□□□ -0.02
GABRB3-205ENST00000545868 XRN1Q8IZH2 1706 aaKnown RBP14.89□□□□□ -0.03
GABRB3-205ENST00000545868 KIF1BO60333 1816 aa14.87□□□□□ -0.03
GABRB3-205ENST00000545868 MSH6P52701 1360 aa14.86□□□□□ -0.03
GABRB3-205ENST00000545868 SHPRHQ149N8 1683 aa14.86□□□□□ -0.03
GABRB3-205ENST00000545868 CLTCL1P53675 1640 aa14.85□□□□□ -0.03
GABRB3-205ENST00000545868 NUTM2DQ5VT03 806 aaPredicted RBP14.85□□□□□ -0.03
GABRB3-205ENST00000545868 TRPM2O94759 1503 aa14.85□□□□□ -0.03
GABRB3-205ENST00000545868 AHDC1Q5TGY3 1603 aaPredicted RBP14.84□□□□□ -0.03
GABRB3-205ENST00000545868 PTPRUQ92729 1446 aa14.84□□□□□ -0.03
GABRB3-205ENST00000545868 BCANQ96GW7 911 aa14.84□□□□□ -0.03
GABRB3-205ENST00000545868 SETBP1Q9Y6X0 1596 aa14.84□□□□□ -0.03
GABRB3-205ENST00000545868 NALCNQ8IZF0 1738 aa14.83□□□□□ -0.04
GABRB3-205ENST00000545868 SPDYE2BA6NHP3 402 aa14.82□□□□□ -0.04
GABRB3-205ENST00000545868 PPP1R15AO75807 674 aaPredicted RBP14.82□□□□□ -0.04
GABRB3-205ENST00000545868 SPDYE6P0CI01 402 aa14.82□□□□□ -0.04
GABRB3-205ENST00000545868 CHGAP10645 457 aaKnown RBP14.82□□□□□ -0.04
GABRB3-205ENST00000545868 SPDYE2Q495Y8 402 aa14.82□□□□□ -0.04
GABRB3-205ENST00000545868 POTEAQ6S8J7 498 aa14.82□□□□□ -0.04
GABRB3-205ENST00000545868 ZNF692Q9BU19 519 aaPredicted RBP14.82□□□□□ -0.04
GABRB3-205ENST00000545868 TBX22Q9Y458 520 aa14.82□□□□□ -0.04
GABRB3-205ENST00000545868 NUP155O75694 1391 aa14.82□□□□□ -0.04
GABRB3-205ENST00000545868 NCOA3Q9Y6Q9 1424 aa14.82□□□□□ -0.04
GABRB3-205ENST00000545868 LRP6O75581 1613 aa14.81□□□□□ -0.04
GABRB3-205ENST00000545868 NHSL1Q5SYE7 1610 aa14.81□□□□□ -0.04
GABRB3-205ENST00000545868 SLAIN2Q9P270 581 aa14.81□□□□□ -0.04
GABRB3-205ENST00000545868 NEXMIFQ5QGS0 1516 aa14.81□□□□□ -0.04
GABRB3-205ENST00000545868 VASPP50552 380 aaPredicted RBP14.8□□□□□ -0.04
GABRB3-205ENST00000545868 PPARGC1BQ86YN6 1023 aaKnown RBP14.8□□□□□ -0.04
GABRB3-205ENST00000545868 PIK3R4Q99570 1358 aa14.8□□□□□ -0.04
GABRB3-205ENST00000545868 SSUH2Q9Y2M2 353 aa14.79□□□□□ -0.04
GABRB3-205ENST00000545868 ITGAEP38570 1179 aa14.78□□□□□ -0.04
GABRB3-205ENST00000545868 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.78□□□□□ -0.04
GABRB3-205ENST00000545868 PPLO60437 1756 aa14.78□□□□□ -0.04
GABRB3-205ENST00000545868 JCADQ9P266 1359 aa14.77□□□□□ -0.04
GABRB3-205ENST00000545868 HDGFP51858 240 aaKnown RBP14.77□□□□□ -0.05
GABRB3-205ENST00000545868 RRBP1Q9P2E9 1410 aaKnown RBP14.75□□□□□ -0.05
GABRB3-205ENST00000545868 ASXL1Q8IXJ9 1541 aa14.74□□□□□ -0.05
GABRB3-205ENST00000545868 NAIPQ13075 1403 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms