RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 PAXIP1Q6ZW49 1069 aaPredicted RBP10.46□□□□□ -0.74
ATXN3-216ENST00000545170 TRIM5Q9C035 493 aa10.46□□□□□ -0.74
ATXN3-216ENST00000545170 CCP110O43303 1012 aa10.45□□□□□ -0.74
ATXN3-216ENST00000545170 WWC1Q8IX03 1113 aa10.45□□□□□ -0.74
ATXN3-216ENST00000545170 CCDC146Q8IYE0 955 aa10.45□□□□□ -0.74
ATXN3-216ENST00000545170 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.45□□□□□ -0.74
ATXN3-216ENST00000545170 DNAJC2Q99543 621 aaKnown RBP10.45□□□□□ -0.74
ATXN3-216ENST00000545170 LETM1O95202 739 aaPredicted RBP10.45□□□□□ -0.74
ATXN3-216ENST00000545170 PPP1R15AO75807 674 aaPredicted RBP10.44□□□□□ -0.74
ATXN3-216ENST00000545170 GOLGA3Q08378 1498 aa10.44□□□□□ -0.74
ATXN3-216ENST00000545170 RTF1Q92541 710 aaKnown RBP10.44□□□□□ -0.74
ATXN3-216ENST00000545170 HOOK1Q9UJC3 728 aaKnown RBP10.44□□□□□ -0.74
ATXN3-216ENST00000545170 CLASRPQ8N2M8 674 aaKnown RBP10.43□□□□□ -0.74
ATXN3-216ENST00000545170 FAM193AP78312 1265 aa10.43□□□□□ -0.74
ATXN3-216ENST00000545170 NAT10Q9H0A0 1025 aaKnown RBP10.43□□□□□ -0.74
ATXN3-216ENST00000545170 MPNDQ8N594 471 aa10.43□□□□□ -0.74
ATXN3-216ENST00000545170 GOLGA6L10A6NI86 522 aa10.42□□□□□ -0.74
ATXN3-216ENST00000545170 C22orf23Q9BZE7 217 aa10.42□□□□□ -0.74
ATXN3-216ENST00000545170 SMC2O95347 1197 aa10.42□□□□□ -0.74
ATXN3-216ENST00000545170 DDX11Q96FC9 970 aa10.42□□□□□ -0.74
ATXN3-216ENST00000545170 RSF1Q96T23 1441 aaPredicted RBP10.42□□□□□ -0.74
ATXN3-216ENST00000545170 MYO6Q9UM54 1294 aa10.42□□□□□ -0.74
ATXN3-216ENST00000545170 VPS37CA5D8V6 355 aaPredicted RBP10.42□□□□□ -0.74
ATXN3-216ENST00000545170 MARCH6O60337 910 aa10.42□□□□□ -0.74
ATXN3-216ENST00000545170 CCDC102AQ96A19 550 aa10.41□□□□□ -0.74
ATXN3-216ENST00000545170 TIGD1Q96MW7 591 aa10.41□□□□□ -0.74
ATXN3-216ENST00000545170 CGNL1Q0VF96 1302 aa10.41□□□□□ -0.74
ATXN3-216ENST00000545170 ZBED9Q6R2W3 1325 aa10.41□□□□□ -0.74
ATXN3-216ENST00000545170 ERLIN1O75477 346 aa10.41□□□□□ -0.74
ATXN3-216ENST00000545170 PPP4R3BQ5MIZ7 849 aa10.4□□□□□ -0.74
ATXN3-216ENST00000545170 DCAF11Q8TEB1 546 aa10.4□□□□□ -0.74
ATXN3-216ENST00000545170 ANO2Q9NQ90 1003 aa10.4□□□□□ -0.74
ATXN3-216ENST00000545170 SLC4A10Q6U841 1118 aa10.4□□□□□ -0.74
ATXN3-216ENST00000545170 U2AF1L5P0DN76 240 aaPredicted RBP10.4□□□□□ -0.74
ATXN3-216ENST00000545170 U2AF1Q01081 240 aaKnown RBP eCLIP10.4□□□□□ -0.74
ATXN3-216ENST00000545170 HSP90AB2PQ58FF8 381 aa10.4□□□□□ -0.74
ATXN3-216ENST00000545170 SMC3Q9UQE7 1217 aa10.4□□□□□ -0.74
ATXN3-216ENST00000545170 PRPF40AO75400 957 aaKnown RBP10.4□□□□□ -0.74
ATXN3-216ENST00000545170 OLFM4Q6UX06 510 aa10.4□□□□□ -0.74
ATXN3-216ENST00000545170 CT47A1Q5JQC4 288 aaPredicted RBP10.4□□□□□ -0.75
ATXN3-216ENST00000545170 CCDC73Q6ZRK6 1079 aa10.4□□□□□ -0.75
ATXN3-216ENST00000545170 POGKQ9P215 609 aa10.4□□□□□ -0.75
ATXN3-216ENST00000545170 LRRCC1Q9C099 1032 aa10.39□□□□□ -0.75
ATXN3-216ENST00000545170 SPDYE4A6NLX3 237 aa10.39□□□□□ -0.75
ATXN3-216ENST00000545170 REC8O95072 547 aa10.39□□□□□ -0.75
ATXN3-216ENST00000545170 GTF2F1P35269 517 aaKnown RBP eCLIP10.39□□□□□ -0.75
ATXN3-216ENST00000545170 ENOX2Q16206 610 aaKnown RBP10.39□□□□□ -0.75
ATXN3-216ENST00000545170 FOSBP53539 338 aa10.39□□□□□ -0.75
ATXN3-216ENST00000545170 VPS53Q5VIR6 699 aa10.39□□□□□ -0.75
ATXN3-216ENST00000545170 TOMM22Q9NS69 142 aa10.39□□□□□ -0.75
ATXN3-216ENST00000545170 SHTN1A0MZ66 631 aa10.38□□□□□ -0.75
ATXN3-216ENST00000545170 ZSCAN30Q86W11 494 aa10.38□□□□□ -0.75
ATXN3-216ENST00000545170 CHMP4CQ96CF2 233 aa10.38□□□□□ -0.75
ATXN3-216ENST00000545170 RNF20Q5VTR2 975 aa10.38□□□□□ -0.75
ATXN3-216ENST00000545170 ODF2Q5BJF6 829 aa10.38□□□□□ -0.75
ATXN3-216ENST00000545170 ABCC9O60706 1549 aa10.38□□□□□ -0.75
ATXN3-216ENST00000545170 CCDC47Q96A33 483 aaKnown RBP10.38□□□□□ -0.75
ATXN3-216ENST00000545170 RBM33Q96EV2 1170 aaKnown RBP10.38□□□□□ -0.75
ATXN3-216ENST00000545170 MBD3O95983 291 aa10.37□□□□□ -0.75
ATXN3-216ENST00000545170 CLGNO14967 610 aa10.37□□□□□ -0.75
ATXN3-216ENST00000545170 POLR3GO15318 223 aaPredicted RBP10.37□□□□□ -0.75
ATXN3-216ENST00000545170 CCAR1Q8IX12 1150 aaKnown RBP10.37□□□□□ -0.75
ATXN3-216ENST00000545170 COG6Q9Y2V7 657 aa10.37□□□□□ -0.75
ATXN3-216ENST00000545170 TRIM29Q14134 588 aa10.37□□□□□ -0.75
ATXN3-216ENST00000545170 PABPN1Q86U42 306 aaKnown RBP eCLIP10.37□□□□□ -0.75
ATXN3-216ENST00000545170 NOL10Q9BSC4 688 aaKnown RBP10.37□□□□□ -0.75
ATXN3-216ENST00000545170 TMCO3Q6UWJ1 677 aa10.36□□□□□ -0.75
ATXN3-216ENST00000545170 FAM177A1Q8N128 213 aaPredicted RBP10.36□□□□□ -0.75
ATXN3-216ENST00000545170 ZFP91Q96JP5 570 aaPredicted RBP10.36□□□□□ -0.75
ATXN3-216ENST00000545170 PHLDB1Q86UU1 1377 aa10.36□□□□□ -0.75
ATXN3-216ENST00000545170 AKAP17AQ02040 695 aaKnown RBP10.36□□□□□ -0.75
ATXN3-216ENST00000545170 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.36□□□□□ -0.75
ATXN3-216ENST00000545170 CCDC27Q2M243 656 aa10.36□□□□□ -0.75
ATXN3-216ENST00000545170 CCNB3Q8WWL7 1395 aa10.35□□□□□ -0.75
ATXN3-216ENST00000545170 SMARCE1Q969G3 411 aa10.35□□□□□ -0.75
ATXN3-216ENST00000545170 BCL2L13Q9BXK5 485 aa10.35□□□□□ -0.75
ATXN3-216ENST00000545170 STK31Q9BXU1 1019 aa10.35□□□□□ -0.75
ATXN3-216ENST00000545170 SETD5Q9C0A6 1442 aa10.35□□□□□ -0.75
ATXN3-216ENST00000545170 MSH5O43196 834 aa10.35□□□□□ -0.75
ATXN3-216ENST00000545170 SOX12O15370 315 aa10.35□□□□□ -0.75
ATXN3-216ENST00000545170 ERLIN2O94905 339 aa10.35□□□□□ -0.75
ATXN3-216ENST00000545170 NF2P35240 595 aa10.35□□□□□ -0.75
ATXN3-216ENST00000545170 TDO2P48775 406 aa10.35□□□□□ -0.75
ATXN3-216ENST00000545170 TAX1BP1Q86VP1 789 aa10.35□□□□□ -0.75
ATXN3-216ENST00000545170 MNAT1P51948 309 aa10.34□□□□□ -0.75
ATXN3-216ENST00000545170 TRIM34Q9BYJ4 488 aa10.34□□□□□ -0.75
ATXN3-216ENST00000545170 FAM107BQ9H098 131 aa10.34□□□□□ -0.75
ATXN3-216ENST00000545170 DNAAF4Q8WXU2 420 aa10.34□□□□□ -0.75
ATXN3-216ENST00000545170 RNF187Q5TA31 235 aaPredicted RBP10.34□□□□□ -0.75
ATXN3-216ENST00000545170 ANKRD62A6NC57 917 aa10.34□□□□□ -0.75
ATXN3-216ENST00000545170 INTS3Q68E01 1043 aaKnown RBP10.34□□□□□ -0.75
ATXN3-216ENST00000545170 XPCQ01831 940 aaPredicted RBP10.33□□□□□ -0.76
ATXN3-216ENST00000545170 LMOD3Q0VAK6 560 aa10.33□□□□□ -0.76
ATXN3-216ENST00000545170 SEPT7Q16181 437 aaKnown RBP10.33□□□□□ -0.76
ATXN3-216ENST00000545170 GOLGA6L10A0A0M3HER8 536 aa10.33□□□□□ -0.76
ATXN3-216ENST00000545170 ZKSCAN2Q63HK3 967 aa10.32□□□□□ -0.76
ATXN3-216ENST00000545170 ZKSCAN1P17029 563 aaPredicted RBP10.32□□□□□ -0.76
ATXN3-216ENST00000545170 NLRP13Q86W25 1043 aa10.32□□□□□ -0.76
ATXN3-216ENST00000545170 SRPK2P78362 688 aaKnown RBP10.32□□□□□ -0.76
ATXN3-216ENST00000545170 ROCK2O75116 1388 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms