RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	AMHR2	Q16671	573 aa		9.37	□□□□□ -0.91
RAP1B-231	ENST00000544639	ADGRG1	Q9Y653	693 aa		9.37	□□□□□ -0.91
RAP1B-231	ENST00000544639	PPP4C	P60510	307 aa		9.36	□□□□□ -0.91
RAP1B-231	ENST00000544639	FAM161A	Q3B820	660 aa		9.36	□□□□□ -0.91
RAP1B-231	ENST00000544639	PNMA3	Q9UL41	463 aa		9.36	□□□□□ -0.91
RAP1B-231	ENST00000544639	SMAP	O00193	183 aa		9.35	□□□□□ -0.91
RAP1B-231	ENST00000544639	SAMD7	Q7Z3H4	446 aa		9.35	□□□□□ -0.91
RAP1B-231	ENST00000544639	OAT	P04181	439 aa		9.34	□□□□□ -0.91
RAP1B-231	ENST00000544639	METTL3	Q86U44	580 aa	Known RBP	9.34	□□□□□ -0.91
RAP1B-231	ENST00000544639	PXYLP1	Q8TE99	480 aa		9.34	□□□□□ -0.91
RAP1B-231	ENST00000544639	PHOX2B	Q99453	314 aa		9.34	□□□□□ -0.91
RAP1B-231	ENST00000544639	C3orf80	F5H4A9	247 aa		9.33	□□□□□ -0.92
RAP1B-231	ENST00000544639	HDGF	P51858	240 aa	Known RBP	9.32	□□□□□ -0.92
RAP1B-231	ENST00000544639	NUDT18	Q6ZVK8	323 aa		9.32	□□□□□ -0.92
RAP1B-231	ENST00000544639	GPBP1L1	Q9HC44	474 aa	Predicted RBP	9.32	□□□□□ -0.92
RAP1B-231	ENST00000544639	PARP9	Q8IXQ6	854 aa		9.31	□□□□□ -0.92
RAP1B-231	ENST00000544639	RBM46	Q8TBY0	533 aa	Known RBP	9.31	□□□□□ -0.92
RAP1B-231	ENST00000544639	NECTIN2	Q92692	538 aa		9.31	□□□□□ -0.92
RAP1B-231	ENST00000544639	IRX2	Q9BZI1	471 aa	Predicted RBP	9.31	□□□□□ -0.92
RAP1B-231	ENST00000544639	EYA1	Q99502	592 aa		9.3	□□□□□ -0.92
RAP1B-231	ENST00000544639	KDM4C	Q9H3R0	1056 aa		9.3	□□□□□ -0.92
RAP1B-231	ENST00000544639	TTLL12	Q14166	644 aa	Predicted RBP	9.29	□□□□□ -0.92
RAP1B-231	ENST00000544639	TJAP1	Q5JTD0	557 aa		9.28	□□□□□ -0.92
RAP1B-231	ENST00000544639	TMUB1	Q9BVT8	246 aa		9.28	□□□□□ -0.92
RAP1B-231	ENST00000544639	CLCN1	P35523	988 aa		9.27	□□□□□ -0.93
RAP1B-231	ENST00000544639	MDM2	Q00987	491 aa	Predicted RBP	9.27	□□□□□ -0.93
RAP1B-231	ENST00000544639	NLRP7	Q8WX94	980 aa		9.27	□□□□□ -0.93
RAP1B-231	ENST00000544639	REPIN1	Q9BWE0	567 aa	Known RBP	9.27	□□□□□ -0.93
RAP1B-231	ENST00000544639	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	9.26	□□□□□ -0.93
RAP1B-231	ENST00000544639	GPCPD1	Q9NPB8	672 aa		9.26	□□□□□ -0.93
RAP1B-231	ENST00000544639	RCCD1	A6NED2	376 aa		9.25	□□□□□ -0.93
RAP1B-231	ENST00000544639	GIGYF2	Q6Y7W6	1299 aa	Known RBP	9.25	□□□□□ -0.93
RAP1B-231	ENST00000544639	SLF2	Q8IX21	1173 aa		9.25	□□□□□ -0.93
RAP1B-231	ENST00000544639	IL21	Q9HBE4	155 aa		9.25	□□□□□ -0.93
RAP1B-231	ENST00000544639	MTR	Q99707	1265 aa		9.24	□□□□□ -0.93
RAP1B-231	ENST00000544639	DNAJB2	P25686	324 aa		9.23	□□□□□ -0.93
RAP1B-231	ENST00000544639	TMEM132A	Q24JP5	1023 aa		9.23	□□□□□ -0.93
RAP1B-231	ENST00000544639	SWT1	Q5T5J6	900 aa	Known RBP	9.23	□□□□□ -0.93
RAP1B-231	ENST00000544639	RNF40	O75150	1001 aa		9.22	□□□□□ -0.93
RAP1B-231	ENST00000544639	SLC4A3	P48751	1232 aa		9.22	□□□□□ -0.93
RAP1B-231	ENST00000544639	APLP1	P51693	650 aa		9.22	□□□□□ -0.93
RAP1B-231	ENST00000544639	MS4A1	P11836	297 aa		9.21	□□□□□ -0.94
RAP1B-231	ENST00000544639	TMEM134	Q9H6X4	195 aa		9.21	□□□□□ -0.94
RAP1B-231	ENST00000544639	FAM217B	Q9NTX9	383 aa	Predicted RBP	9.21	□□□□□ -0.94
RAP1B-231	ENST00000544639	FAM117A	Q9C073	453 aa		9.2	□□□□□ -0.94
RAP1B-231	ENST00000544639	DAXX	Q9UER7	740 aa	Predicted RBP	9.2	□□□□□ -0.94
RAP1B-231	ENST00000544639	PRR14	Q9BWN1	585 aa		9.19	□□□□□ -0.94
RAP1B-231	ENST00000544639	SSTR3	P32745	418 aa	Predicted RBP	9.18	□□□□□ -0.94
RAP1B-231	ENST00000544639	DDRGK1	Q96HY6	314 aa		9.18	□□□□□ -0.94
RAP1B-231	ENST00000544639	PLEKHG3	A1L390	1219 aa		9.17	□□□□□ -0.94
RAP1B-231	ENST00000544639	IL27	Q8NEV9	243 aa		9.17	□□□□□ -0.94
RAP1B-231	ENST00000544639	ZNF516	Q92618	1163 aa		9.17	□□□□□ -0.94
RAP1B-231	ENST00000544639	LAPTM4A	Q15012	233 aa		9.16	□□□□□ -0.94
RAP1B-231	ENST00000544639	PPP1R18	Q6NYC8	613 aa		9.16	□□□□□ -0.94
RAP1B-231	ENST00000544639	SULF1	Q8IWU6	871 aa		9.14	□□□□□ -0.95
RAP1B-231	ENST00000544639	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	9.14	□□□□□ -0.95
RAP1B-231	ENST00000544639		V9GY48	417 aa	Predicted RBP	9.14	□□□□□ -0.95
RAP1B-231	ENST00000544639	DDX11L8	A8MPP1	907 aa		9.13	□□□□□ -0.95
RAP1B-231	ENST00000544639	CD46	P15529	392 aa		9.13	□□□□□ -0.95
RAP1B-231	ENST00000544639	BEGAIN	Q9BUH8	593 aa		9.13	□□□□□ -0.95
RAP1B-231	ENST00000544639	ZPR1	O75312	459 aa		9.12	□□□□□ -0.95
RAP1B-231	ENST00000544639	PRKD2	Q9BZL6	878 aa		9.12	□□□□□ -0.95
RAP1B-231	ENST00000544639	GGCX	P38435	758 aa		9.11	□□□□□ -0.95
RAP1B-231	ENST00000544639	COPS2	P61201	443 aa		9.11	□□□□□ -0.95
RAP1B-231	ENST00000544639	PCDHB3	Q9Y5E6	796 aa		9.11	□□□□□ -0.95
RAP1B-231	ENST00000544639		Q6ZNB5	142 aa		9.1	□□□□□ -0.95
RAP1B-231	ENST00000544639	NKX2-3	Q8TAU0	364 aa		9.1	□□□□□ -0.95
RAP1B-231	ENST00000544639	RDH13	Q8NBN7	331 aa		9.09	□□□□□ -0.95
RAP1B-231	ENST00000544639	SLC10A3	P09131	477 aa		9.08	□□□□□ -0.96
RAP1B-231	ENST00000544639	KMT5B	Q4FZB7	885 aa		9.08	□□□□□ -0.96
RAP1B-231	ENST00000544639	ACTN4	O43707	911 aa	Known RBP	9.07	□□□□□ -0.96
RAP1B-231	ENST00000544639	GOPC	Q9HD26	462 aa		9.07	□□□□□ -0.96
RAP1B-231	ENST00000544639	GFRA3	O60609	400 aa		9.06	□□□□□ -0.96
RAP1B-231	ENST00000544639	SH3D19	Q5HYK7	790 aa		9.06	□□□□□ -0.96
RAP1B-231	ENST00000544639	RSPH4A	Q5TD94	716 aa		9.06	□□□□□ -0.96
RAP1B-231	ENST00000544639	BLOC1S3	Q6QNY0	202 aa		9.06	□□□□□ -0.96
RAP1B-231	ENST00000544639	TBC1D2	Q9BYX2	928 aa		9.05	□□□□□ -0.96
RAP1B-231	ENST00000544639	RSPH6A	Q9H0K4	717 aa		9.05	□□□□□ -0.96
RAP1B-231	ENST00000544639	NRG2	O14511	850 aa	Predicted RBP	9.04	□□□□□ -0.96
RAP1B-231	ENST00000544639	CFH	P08603	1231 aa		9.04	□□□□□ -0.96
RAP1B-231	ENST00000544639	GCGR	P47871	477 aa		9.04	□□□□□ -0.96
RAP1B-231	ENST00000544639	MYSM1	Q5VVJ2	828 aa		9.04	□□□□□ -0.96
RAP1B-231	ENST00000544639	DIXDC1	Q155Q3	683 aa		9.03	□□□□□ -0.96
RAP1B-231	ENST00000544639	SPIRE2	Q8WWL2	714 aa		9.03	□□□□□ -0.96
RAP1B-231	ENST00000544639	SKIV2L	Q15477	1246 aa	Known RBP	9.02	□□□□□ -0.97
RAP1B-231	ENST00000544639	NUTM1	Q86Y26	1132 aa		9.02	□□□□□ -0.97
RAP1B-231	ENST00000544639	KDM4A	O75164	1064 aa		9.01	□□□□□ -0.97
RAP1B-231	ENST00000544639	RNF223	E7ERA6	249 aa		9	□□□□□ -0.97
RAP1B-231	ENST00000544639	USP46	P62068	366 aa		9	□□□□□ -0.97
RAP1B-231	ENST00000544639	PCMTD1	Q96MG8	357 aa	Predicted RBP	9	□□□□□ -0.97
RAP1B-231	ENST00000544639	GTF3C3	Q9Y5Q9	886 aa		9	□□□□□ -0.97
RAP1B-231	ENST00000544639	NR1I2	O75469	434 aa		8.99	□□□□□ -0.97
RAP1B-231	ENST00000544639	TRAF7	Q6Q0C0	670 aa		8.99	□□□□□ -0.97
RAP1B-231	ENST00000544639	POLR3E	Q9NVU0	708 aa		8.99	□□□□□ -0.97
RAP1B-231	ENST00000544639	MOXD2P	A6NHM9	499 aa		8.98	□□□□□ -0.97
RAP1B-231	ENST00000544639	HOXA2	O43364	376 aa		8.98	□□□□□ -0.97
RAP1B-231	ENST00000544639	TLL1	O43897	1013 aa		8.98	□□□□□ -0.97
RAP1B-231	ENST00000544639	CLK2	P49760	499 aa	Known RBP	8.98	□□□□□ -0.97
RAP1B-231	ENST00000544639	ANKLE1	Q8NAG6	615 aa		8.98	□□□□□ -0.97
RAP1B-231	ENST00000544639	LCE2B	O14633	110 aa		8.97	□□□□□ -0.97

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