RNA–Protein interactions for RNA: ENST00000544588.1

CIT-214, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-214ENST00000544588 RIMS2Q9UQ26 1411 aa19.71■□□□□ 0.75
CIT-214ENST00000544588 TET3O43151 1660 aa19.71■□□□□ 0.75
CIT-214ENST00000544588 KCNA6P17658 529 aa19.7■□□□□ 0.74
CIT-214ENST00000544588 PROSER2Q86WR7 435 aaPredicted RBP19.7■□□□□ 0.74
CIT-214ENST00000544588 ADGRB3O60242 1522 aa19.7■□□□□ 0.74
CIT-214ENST00000544588 HFM1A2PYH4 1435 aa19.68■□□□□ 0.74
CIT-214ENST00000544588 RBM33Q96EV2 1170 aaKnown RBP19.68■□□□□ 0.74
CIT-214ENST00000544588 IQGAP3Q86VI3 1631 aa19.66■□□□□ 0.74
CIT-214ENST00000544588 LRRC7Q96NW7 1537 aa19.66■□□□□ 0.74
CIT-214ENST00000544588 HSPA1LP34931 641 aa19.65■□□□□ 0.74
CIT-214ENST00000544588 PLEKHG1Q9ULL1 1385 aa19.65■□□□□ 0.74
CIT-214ENST00000544588 ZFYVE9O95405 1425 aa19.64■□□□□ 0.73
CIT-214ENST00000544588 FOXD1Q16676 465 aa19.63■□□□□ 0.73
CIT-214ENST00000544588 TBX22Q9Y458 520 aa19.63■□□□□ 0.73
CIT-214ENST00000544588 TMEM94Q12767 1356 aa19.62■□□□□ 0.73
CIT-214ENST00000544588 E9PCH4 1651 aa19.62■□□□□ 0.73
CIT-214ENST00000544588 GCC2Q8IWJ2 1684 aa19.61■□□□□ 0.73
CIT-214ENST00000544588 C14orf37Q86TY3 774 aa19.59■□□□□ 0.73
CIT-214ENST00000544588 MPHOSPH9Q99550 1183 aa19.58■□□□□ 0.72
CIT-214ENST00000544588 KDM5AP29375 1690 aaKnown RBP19.58■□□□□ 0.72
CIT-214ENST00000544588 TMEM131LA2VDJ0 1609 aa19.58■□□□□ 0.72
CIT-214ENST00000544588 AMOTL2Q9Y2J4 779 aa19.55■□□□□ 0.72
CIT-214ENST00000544588 ADAMTS13Q76LX8 1427 aa19.52■□□□□ 0.72
CIT-214ENST00000544588 MSH6P52701 1360 aa19.52■□□□□ 0.72
CIT-214ENST00000544588 SETD5Q9C0A6 1442 aa19.51■□□□□ 0.71
CIT-214ENST00000544588 VGFO15240 615 aaPredicted RBP19.51■□□□□ 0.71
CIT-214ENST00000544588 RGL3Q3MIN7 710 aa19.51■□□□□ 0.71
CIT-214ENST00000544588 STRCP1A6NGW2 1772 aa19.51■□□□□ 0.71
CIT-214ENST00000544588 ACIN1Q9UKV3 1341 aaKnown RBP19.49■□□□□ 0.71
CIT-214ENST00000544588 RPGRIP1LQ68CZ1 1315 aa19.48■□□□□ 0.71
CIT-214ENST00000544588 NKTRP30414 1462 aaKnown RBP19.48■□□□□ 0.71
CIT-214ENST00000544588 PIK3R4Q99570 1358 aa19.47■□□□□ 0.71
CIT-214ENST00000544588 TRPM2O94759 1503 aa19.47■□□□□ 0.71
CIT-214ENST00000544588 SLAIN2Q9P270 581 aa19.47■□□□□ 0.71
CIT-214ENST00000544588 ATF3P18847 181 aa19.46■□□□□ 0.71
CIT-214ENST00000544588 CCDC144AA2RUR9 1427 aa19.45■□□□□ 0.7
CIT-214ENST00000544588 C19orf44Q9H6X5 657 aa19.45■□□□□ 0.7
CIT-214ENST00000544588 RAB3GAP2Q9H2M9 1393 aa19.44■□□□□ 0.7
CIT-214ENST00000544588 SPHKAPQ2M3C7 1700 aa19.44■□□□□ 0.7
CIT-214ENST00000544588 METP08581 1390 aa19.44■□□□□ 0.7
CIT-214ENST00000544588 CLTCL1P53675 1640 aa19.43■□□□□ 0.7
CIT-214ENST00000544588 ALKQ9UM73 1620 aa19.43■□□□□ 0.7
CIT-214ENST00000544588 FAM135BQ49AJ0 1406 aa19.42■□□□□ 0.7
CIT-214ENST00000544588 PTPRUQ92729 1446 aa19.42■□□□□ 0.7
CIT-214ENST00000544588 MYO5BQ9ULV0 1848 aa19.42■□□□□ 0.7
CIT-214ENST00000544588 CADPS2Q86UW7 1296 aa19.42■□□□□ 0.7
CIT-214ENST00000544588 PHF23Q9BUL5 403 aaPredicted RBP19.41■□□□□ 0.7
CIT-214ENST00000544588 NWD1Q149M9 1564 aa19.4■□□□□ 0.7
CIT-214ENST00000544588 NCOA3Q9Y6Q9 1424 aa19.39■□□□□ 0.69
CIT-214ENST00000544588 DIP2AQ14689 1571 aa19.39■□□□□ 0.69
CIT-214ENST00000544588 NEXMIFQ5QGS0 1516 aa19.37■□□□□ 0.69
CIT-214ENST00000544588 ADGRF5Q8IZF2 1346 aa19.37■□□□□ 0.69
CIT-214ENST00000544588 SETBP1Q9Y6X0 1596 aa19.35■□□□□ 0.69
CIT-214ENST00000544588 STK26Q9P289 416 aa19.34■□□□□ 0.69
CIT-214ENST00000544588 ANKRD30BQ9BXX2 1392 aa19.32■□□□□ 0.68
CIT-214ENST00000544588 CHD2O14647 1828 aaKnown RBP19.31■□□□□ 0.68
CIT-214ENST00000544588 HRCP23327 699 aa19.31■□□□□ 0.68
CIT-214ENST00000544588 TMEM132EQ6IEE7 984 aa19.3■□□□□ 0.68
CIT-214ENST00000544588 SPATA31E1Q6ZUB1 1445 aa19.3■□□□□ 0.68
CIT-214ENST00000544588 XIRP1Q702N8 1843 aaKnown RBP19.29■□□□□ 0.68
CIT-214ENST00000544588 BRINP3Q76B58 766 aa19.28■□□□□ 0.68
CIT-214ENST00000544588 ROBO2Q9HCK4 1378 aa19.28■□□□□ 0.68
CIT-214ENST00000544588 NRXN3Q9Y4C0 1643 aa19.28■□□□□ 0.68
CIT-214ENST00000544588 KIF1BO60333 1816 aa19.28■□□□□ 0.68
CIT-214ENST00000544588 KDM2AQ9Y2K7 1162 aa19.27■□□□□ 0.68
CIT-214ENST00000544588 MED1Q15648 1581 aaPredicted RBP19.25■□□□□ 0.67
CIT-214ENST00000544588 WAPLQ7Z5K2 1190 aa19.25■□□□□ 0.67
CIT-214ENST00000544588 CFAP70Q5T0N1 1121 aa19.24■□□□□ 0.67
CIT-214ENST00000544588 ROBO1Q9Y6N7 1651 aa19.24■□□□□ 0.67
CIT-214ENST00000544588 JCADQ9P266 1359 aa19.23■□□□□ 0.67
CIT-214ENST00000544588 DCCP43146 1447 aa19.23■□□□□ 0.67
CIT-214ENST00000544588 ADGRL3Q9HAR2 1447 aa19.23■□□□□ 0.67
CIT-214ENST00000544588 DCAF11Q8TEB1 546 aa19.22■□□□□ 0.67
CIT-214ENST00000544588 DDX17Q92841 729 aaKnown RBP19.22■□□□□ 0.67
CIT-214ENST00000544588 C14orf93Q9H972 538 aaKnown RBP19.22■□□□□ 0.67
CIT-214ENST00000544588 PTCH1Q13635 1447 aa19.21■□□□□ 0.67
CIT-214ENST00000544588 MEX3CQ5U5Q3 659 aaKnown RBP19.2■□□□□ 0.66
CIT-214ENST00000544588 XRN1Q8IZH2 1706 aaKnown RBP19.2■□□□□ 0.66
CIT-214ENST00000544588 LRPPRCP42704 1394 aaKnown RBP19.19■□□□□ 0.66
CIT-214ENST00000544588 MST1RQ04912 1400 aa19.19■□□□□ 0.66
CIT-214ENST00000544588 NUTM2FA1L443 756 aa19.19■□□□□ 0.66
CIT-214ENST00000544588 ORAI2Q96SN7 254 aa19.19■□□□□ 0.66
CIT-214ENST00000544588 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.18■□□□□ 0.66
CIT-214ENST00000544588 NUTM2BA6NNL0 878 aaPredicted RBP19.18■□□□□ 0.66
CIT-214ENST00000544588 NUTM2EB1AL46 878 aaPredicted RBP19.18■□□□□ 0.66
CIT-214ENST00000544588 NUTM2AQ8IVF1 878 aaPredicted RBP19.18■□□□□ 0.66
CIT-214ENST00000544588 DHX57Q6P158 1386 aaKnown RBP19.18■□□□□ 0.66
CIT-214ENST00000544588 PIK3C2GO75747 1445 aa19.17■□□□□ 0.66
CIT-214ENST00000544588 ESCO1Q5FWF5 840 aa19.17■□□□□ 0.66
CIT-214ENST00000544588 ABCC11Q96J66 1382 aa19.17■□□□□ 0.66
CIT-214ENST00000544588 SAFB2Q14151 953 aaKnown RBP eCLIP19.16■□□□□ 0.66
CIT-214ENST00000544588 LRRC59Q96AG4 307 aaKnown RBP19.16■□□□□ 0.66
CIT-214ENST00000544588 RGS17Q9UGC6 210 aaPredicted RBP19.16■□□□□ 0.66
CIT-214ENST00000544588 POGKQ9P215 609 aa19.15■□□□□ 0.66
CIT-214ENST00000544588 C1orf167Q5SNV9 1468 aa19.15■□□□□ 0.66
CIT-214ENST00000544588 SPATA31A6Q5VVP1 1343 aa19.14■□□□□ 0.65
CIT-214ENST00000544588 PLEKHH1Q9ULM0 1364 aa19.14■□□□□ 0.65
CIT-214ENST00000544588 YTHDC2Q9H6S0 1430 aaKnown RBP19.14■□□□□ 0.65
CIT-214ENST00000544588 PPLO60437 1756 aa19.13■□□□□ 0.65
CIT-214ENST00000544588 ASXL1Q8IXJ9 1541 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms