RNA–Protein interactions for RNA: ENST00000544552.5

PAAF1-214, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-214ENST00000544552 ESF1Q9H501 851 aaKnown RBP17.66■□□□□ 0.42
PAAF1-214ENST00000544552 MROH2AA6NES4 1674 aa17.66■□□□□ 0.42
PAAF1-214ENST00000544552 SYNMO15061 1565 aa17.66■□□□□ 0.42
PAAF1-214ENST00000544552 TESK2Q96S53 571 aa17.65■□□□□ 0.42
PAAF1-214ENST00000544552 ADGRF5Q8IZF2 1346 aa17.63■□□□□ 0.41
PAAF1-214ENST00000544552 SCAF11Q99590 1463 aaKnown RBP17.63■□□□□ 0.41
PAAF1-214ENST00000544552 IQGAP1P46940 1657 aa17.62■□□□□ 0.41
PAAF1-214ENST00000544552 PREX1Q8TCU6 1659 aa17.62■□□□□ 0.41
PAAF1-214ENST00000544552 PPLO60437 1756 aa17.62■□□□□ 0.41
PAAF1-214ENST00000544552 IDI1Q13907 227 aa17.61■□□□□ 0.41
PAAF1-214ENST00000544552 CHGAP10645 457 aaKnown RBP17.61■□□□□ 0.41
PAAF1-214ENST00000544552 SLC24A1O60721 1099 aa17.6■□□□□ 0.41
PAAF1-214ENST00000544552 PRKRIP1Q9H875 184 aaPredicted RBP17.6■□□□□ 0.41
PAAF1-214ENST00000544552 ADAMTSL3P82987 1691 aa17.59■□□□□ 0.41
PAAF1-214ENST00000544552 ERVK-7P63135 1459 aa17.59■□□□□ 0.41
PAAF1-214ENST00000544552 ZFYVE9O95405 1425 aa17.59■□□□□ 0.41
PAAF1-214ENST00000544552 VGFO15240 615 aaPredicted RBP17.58■□□□□ 0.41
PAAF1-214ENST00000544552 TMF1P82094 1093 aa17.58■□□□□ 0.41
PAAF1-214ENST00000544552 PIK3C2GO75747 1445 aa17.58■□□□□ 0.4
PAAF1-214ENST00000544552 EIF3AQ14152 1382 aaKnown RBP17.58■□□□□ 0.4
PAAF1-214ENST00000544552 CFAP70Q5T0N1 1121 aa17.58■□□□□ 0.4
PAAF1-214ENST00000544552 C14orf93Q9H972 538 aaKnown RBP17.58■□□□□ 0.4
PAAF1-214ENST00000544552 SETBP1Q9Y6X0 1596 aa17.58■□□□□ 0.4
PAAF1-214ENST00000544552 CLTCQ00610 1675 aaKnown RBP17.57■□□□□ 0.4
PAAF1-214ENST00000544552 FER1L4A9Z1Z3 1794 aa17.56■□□□□ 0.4
PAAF1-214ENST00000544552 ZMYM3Q14202 1370 aa17.56■□□□□ 0.4
PAAF1-214ENST00000544552 FBXO31Q5XUX0 539 aaPredicted RBP17.55■□□□□ 0.4
PAAF1-214ENST00000544552 POLR3GLQ9BT43 218 aa17.55■□□□□ 0.4
PAAF1-214ENST00000544552 NEXMIFQ5QGS0 1516 aa17.55■□□□□ 0.4
PAAF1-214ENST00000544552 SPATA31D1Q6ZQQ2 1576 aa17.54■□□□□ 0.4
PAAF1-214ENST00000544552 TMEM131LA2VDJ0 1609 aa17.54■□□□□ 0.4
PAAF1-214ENST00000544552 CDCA8Q53HL2 280 aa17.54■□□□□ 0.4
PAAF1-214ENST00000544552 DISP3Q9P2K9 1392 aa17.53■□□□□ 0.4
PAAF1-214ENST00000544552 KTN1Q86UP2 1357 aaKnown RBP17.51■□□□□ 0.39
PAAF1-214ENST00000544552 RIMS1Q86UR5 1692 aaKnown RBP17.5■□□□□ 0.39
PAAF1-214ENST00000544552 SBNO2Q9Y2G9 1366 aa17.5■□□□□ 0.39
PAAF1-214ENST00000544552 ADGRB1O14514 1584 aa17.49■□□□□ 0.39
PAAF1-214ENST00000544552 KDM4FA0A1W2PPD8 638 aa17.49■□□□□ 0.39
PAAF1-214ENST00000544552 MYO3AQ8NEV4 1616 aa17.48■□□□□ 0.39
PAAF1-214ENST00000544552 PER1O15534 1290 aaPredicted RBP17.47■□□□□ 0.39
PAAF1-214ENST00000544552 PTPRMP28827 1452 aa17.47■□□□□ 0.39
PAAF1-214ENST00000544552 CEBPAP49715 358 aaPredicted RBP17.47■□□□□ 0.39
PAAF1-214ENST00000544552 MYO5BQ9ULV0 1848 aa17.46■□□□□ 0.39
PAAF1-214ENST00000544552 C3P01024 1663 aa17.46■□□□□ 0.39
PAAF1-214ENST00000544552 RALBP1Q15311 655 aa17.45■□□□□ 0.38
PAAF1-214ENST00000544552 STAG3Q9UJ98 1225 aa17.44■□□□□ 0.38
PAAF1-214ENST00000544552 A2ML1A8K2U0 1454 aa17.44■□□□□ 0.38
PAAF1-214ENST00000544552 PLPPR3Q6T4P5 718 aa17.43■□□□□ 0.38
PAAF1-214ENST00000544552 CENPJQ9HC77 1338 aaPredicted RBP17.43■□□□□ 0.38
PAAF1-214ENST00000544552 TNRQ92752 1358 aa17.42■□□□□ 0.38
PAAF1-214ENST00000544552 CCDC184Q52MB2 194 aa17.41■□□□□ 0.38
PAAF1-214ENST00000544552 PANK3Q9H999 370 aa17.41■□□□□ 0.38
PAAF1-214ENST00000544552 MRS2Q9HD23 443 aa17.41■□□□□ 0.38
PAAF1-214ENST00000544552 SCAF1Q9H7N4 1312 aaKnown RBP17.4■□□□□ 0.38
PAAF1-214ENST00000544552 NUTM2DQ5VT03 806 aaPredicted RBP17.4■□□□□ 0.38
PAAF1-214ENST00000544552 TMEM132EQ6IEE7 984 aa17.4■□□□□ 0.38
PAAF1-214ENST00000544552 PUS7Q96PZ0 661 aaKnown RBP17.39■□□□□ 0.38
PAAF1-214ENST00000544552 TRAK1Q9UPV9 953 aa17.39■□□□□ 0.38
PAAF1-214ENST00000544552 KDM5AP29375 1690 aaKnown RBP17.39■□□□□ 0.37
PAAF1-214ENST00000544552 PARD3Q8TEW0 1356 aa17.38■□□□□ 0.37
PAAF1-214ENST00000544552 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.38■□□□□ 0.37
PAAF1-214ENST00000544552 RIMS2Q9UQ26 1411 aa17.38■□□□□ 0.37
PAAF1-214ENST00000544552 MYBBP1AQ9BQG0 1328 aaKnown RBP17.37■□□□□ 0.37
PAAF1-214ENST00000544552 HDGFP51858 240 aaKnown RBP17.37■□□□□ 0.37
PAAF1-214ENST00000544552 NLRP1Q9C000 1473 aa17.36■□□□□ 0.37
PAAF1-214ENST00000544552 BRD4O60885 1362 aaPredicted RBP17.35■□□□□ 0.37
PAAF1-214ENST00000544552 ALKQ9UM73 1620 aa17.35■□□□□ 0.37
PAAF1-214ENST00000544552 GTF3C3Q9Y5Q9 886 aa17.35■□□□□ 0.37
PAAF1-214ENST00000544552 ASXL1Q8IXJ9 1541 aa17.34■□□□□ 0.37
PAAF1-214ENST00000544552 ARHGEF28Q8N1W1 1705 aaKnown RBP17.34■□□□□ 0.37
PAAF1-214ENST00000544552 QRICH2Q9H0J4 1663 aa17.34■□□□□ 0.37
PAAF1-214ENST00000544552 NPC1L1Q9UHC9 1359 aa17.34■□□□□ 0.37
PAAF1-214ENST00000544552 MYOM1P52179 1685 aa17.33■□□□□ 0.37
PAAF1-214ENST00000544552 KNSTRNQ9Y448 316 aa17.32■□□□□ 0.36
PAAF1-214ENST00000544552 YTHDC2Q9H6S0 1430 aaKnown RBP17.31■□□□□ 0.36
PAAF1-214ENST00000544552 NLRP13Q86W25 1043 aa17.31■□□□□ 0.36
PAAF1-214ENST00000544552 TMC1Q8TDI8 760 aa17.31■□□□□ 0.36
PAAF1-214ENST00000544552 SETD1BQ9UPS6 1966 aaKnown RBP17.31■□□□□ 0.36
PAAF1-214ENST00000544552 PNISRQ8TF01 805 aaKnown RBP17.3■□□□□ 0.36
PAAF1-214ENST00000544552 EVC2Q86UK5 1308 aa17.3■□□□□ 0.36
PAAF1-214ENST00000544552 TMEM2Q9UHN6 1383 aa17.29■□□□□ 0.36
PAAF1-214ENST00000544552 HNRNPUQ00839 825 aaKnown RBP eCLIP17.29■□□□□ 0.36
PAAF1-214ENST00000544552 AMER1Q5JTC6 1135 aaPredicted RBP17.29■□□□□ 0.36
PAAF1-214ENST00000544552 FAM9BQ8IZU0 186 aa17.29■□□□□ 0.36
PAAF1-214ENST00000544552 UBR1Q8IWV7 1749 aa17.29■□□□□ 0.36
PAAF1-214ENST00000544552 DLC1Q96QB1 1528 aa17.27■□□□□ 0.36
PAAF1-214ENST00000544552 CEP170BQ9Y4F5 1589 aaPredicted RBP17.27■□□□□ 0.36
PAAF1-214ENST00000544552 CNGB1Q14028 1251 aaPredicted RBP17.27■□□□□ 0.36
PAAF1-214ENST00000544552 LRPPRCP42704 1394 aaKnown RBP17.26■□□□□ 0.35
PAAF1-214ENST00000544552 ABCC11Q96J66 1382 aa17.26■□□□□ 0.35
PAAF1-214ENST00000544552 SETD1AO15047 1707 aaKnown RBP17.26■□□□□ 0.35
PAAF1-214ENST00000544552 CC2D1BQ5T0F9 858 aaKnown RBP17.26■□□□□ 0.35
PAAF1-214ENST00000544552 THEMISQ8N1K5 641 aaPredicted RBP17.26■□□□□ 0.35
PAAF1-214ENST00000544552 STK26Q9P289 416 aa17.25■□□□□ 0.35
PAAF1-214ENST00000544552 ZNF142P52746 1687 aaPredicted RBP17.25■□□□□ 0.35
PAAF1-214ENST00000544552 NRXN3Q9Y4C0 1643 aa17.24■□□□□ 0.35
PAAF1-214ENST00000544552 TULP4Q9NRJ4 1543 aa17.24■□□□□ 0.35
PAAF1-214ENST00000544552 SIRT1Q96EB6 747 aa17.24■□□□□ 0.35
PAAF1-214ENST00000544552 PRAM1Q96QH2 718 aa17.23■□□□□ 0.35
PAAF1-214ENST00000544552 CARD14Q9BXL6 1004 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms