RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 ADGRB3O60242 1522 aa18.89■□□□□ 0.61
HCFC2-202ENST00000544223 MYO5BQ9ULV0 1848 aa18.88■□□□□ 0.61
HCFC2-202ENST00000544223 CCER2I3L3R5 266 aa18.88■□□□□ 0.61
HCFC2-202ENST00000544223 CLTCQ00610 1675 aaKnown RBP18.88■□□□□ 0.61
HCFC2-202ENST00000544223 IFT172Q9UG01 1749 aa18.86■□□□□ 0.61
HCFC2-202ENST00000544223 TRAK1Q9UPV9 953 aa18.85■□□□□ 0.61
HCFC2-202ENST00000544223 FAM9BQ8IZU0 186 aa18.85■□□□□ 0.61
HCFC2-202ENST00000544223 PREX1Q8TCU6 1659 aa18.84■□□□□ 0.61
HCFC2-202ENST00000544223 ARHGEF40Q8TER5 1519 aa18.83■□□□□ 0.6
HCFC2-202ENST00000544223 PPLO60437 1756 aa18.82■□□□□ 0.6
HCFC2-202ENST00000544223 MRS2Q9HD23 443 aa18.82■□□□□ 0.6
HCFC2-202ENST00000544223 IQGAP1P46940 1657 aa18.82■□□□□ 0.6
HCFC2-202ENST00000544223 ZC3H13Q5T200 1668 aaKnown RBP18.82■□□□□ 0.6
HCFC2-202ENST00000544223 PIK3C2BO00750 1634 aa18.82■□□□□ 0.6
HCFC2-202ENST00000544223 SAFB2Q14151 953 aaKnown RBP eCLIP18.81■□□□□ 0.6
HCFC2-202ENST00000544223 STAG3Q9UJ98 1225 aa18.81■□□□□ 0.6
HCFC2-202ENST00000544223 ARHGAP31Q2M1Z3 1444 aa18.81■□□□□ 0.6
HCFC2-202ENST00000544223 LAMC1P11047 1609 aa18.81■□□□□ 0.6
HCFC2-202ENST00000544223 TMF1P82094 1093 aa18.8■□□□□ 0.6
HCFC2-202ENST00000544223 SCAF11Q99590 1463 aaKnown RBP18.8■□□□□ 0.6
HCFC2-202ENST00000544223 CEBPAP49715 358 aaPredicted RBP18.8■□□□□ 0.6
HCFC2-202ENST00000544223 MYOM2P54296 1465 aa18.8■□□□□ 0.6
HCFC2-202ENST00000544223 PANK3Q9H999 370 aa18.8■□□□□ 0.6
HCFC2-202ENST00000544223 CC2D1BQ5T0F9 858 aaKnown RBP18.79■□□□□ 0.6
HCFC2-202ENST00000544223 ESF1Q9H501 851 aaKnown RBP18.79■□□□□ 0.6
HCFC2-202ENST00000544223 STK26Q9P289 416 aa18.79■□□□□ 0.6
HCFC2-202ENST00000544223 ERVK-7P63135 1459 aa18.78■□□□□ 0.6
HCFC2-202ENST00000544223 PIK3C2GO75747 1445 aa18.78■□□□□ 0.6
HCFC2-202ENST00000544223 HNRNPUQ00839 825 aaKnown RBP eCLIP18.77■□□□□ 0.6
HCFC2-202ENST00000544223 SLC52A1Q9NWF4 448 aa18.77■□□□□ 0.6
HCFC2-202ENST00000544223 NEXMIFQ5QGS0 1516 aa18.77■□□□□ 0.59
HCFC2-202ENST00000544223 AGLP35573 1532 aa18.76■□□□□ 0.59
HCFC2-202ENST00000544223 NRXN1Q9ULB1 1477 aa18.76■□□□□ 0.59
HCFC2-202ENST00000544223 C14orf93Q9H972 538 aaKnown RBP18.76■□□□□ 0.59
HCFC2-202ENST00000544223 NEURL4Q96JN8 1562 aa18.75■□□□□ 0.59
HCFC2-202ENST00000544223 ZMYM3Q14202 1370 aa18.75■□□□□ 0.59
HCFC2-202ENST00000544223 REREQ9P2R6 1566 aa18.75■□□□□ 0.59
HCFC2-202ENST00000544223 TMEM131LA2VDJ0 1609 aa18.74■□□□□ 0.59
HCFC2-202ENST00000544223 STAC3Q96MF2 364 aa18.74■□□□□ 0.59
HCFC2-202ENST00000544223 PER1O15534 1290 aaPredicted RBP18.74■□□□□ 0.59
HCFC2-202ENST00000544223 VGFO15240 615 aaPredicted RBP18.73■□□□□ 0.59
HCFC2-202ENST00000544223 KIAA1210Q9ULL0 1709 aa18.71■□□□□ 0.59
HCFC2-202ENST00000544223 RPGRIP1LQ68CZ1 1315 aa18.7■□□□□ 0.58
HCFC2-202ENST00000544223 ADGRB1O14514 1584 aa18.7■□□□□ 0.58
HCFC2-202ENST00000544223 CENPJQ9HC77 1338 aaPredicted RBP18.68■□□□□ 0.58
HCFC2-202ENST00000544223 EIF3AQ14152 1382 aaKnown RBP18.68■□□□□ 0.58
HCFC2-202ENST00000544223 DNAJC5Q9H3Z4 198 aa18.65■□□□□ 0.58
HCFC2-202ENST00000544223 TMC1Q8TDI8 760 aa18.65■□□□□ 0.58
HCFC2-202ENST00000544223 PPP6R1Q9UPN7 881 aa18.65■□□□□ 0.58
HCFC2-202ENST00000544223 A2ML1A8K2U0 1454 aa18.64■□□□□ 0.57
HCFC2-202ENST00000544223 SPATA31D1Q6ZQQ2 1576 aa18.64■□□□□ 0.57
HCFC2-202ENST00000544223 ASXL1Q8IXJ9 1541 aa18.63■□□□□ 0.57
HCFC2-202ENST00000544223 SLC12A5Q9H2X9 1139 aa18.62■□□□□ 0.57
HCFC2-202ENST00000544223 MYOM1P52179 1685 aa18.62■□□□□ 0.57
HCFC2-202ENST00000544223 KTN1Q86UP2 1357 aaKnown RBP18.62■□□□□ 0.57
HCFC2-202ENST00000544223 QRICH2Q9H0J4 1663 aa18.62■□□□□ 0.57
HCFC2-202ENST00000544223 BCANQ96GW7 911 aa18.62■□□□□ 0.57
HCFC2-202ENST00000544223 CABP2Q9NPB3 220 aa18.62■□□□□ 0.57
HCFC2-202ENST00000544223 SETBP1Q9Y6X0 1596 aa18.61■□□□□ 0.57
HCFC2-202ENST00000544223 CARD14Q9BXL6 1004 aa18.61■□□□□ 0.57
HCFC2-202ENST00000544223 MINK1Q8N4C8 1332 aaPredicted RBP18.6■□□□□ 0.57
HCFC2-202ENST00000544223 PRAM1Q96QH2 718 aa18.6■□□□□ 0.57
HCFC2-202ENST00000544223 KNSTRNQ9Y448 316 aa18.6■□□□□ 0.57
HCFC2-202ENST00000544223 RIMS2Q9UQ26 1411 aa18.6■□□□□ 0.57
HCFC2-202ENST00000544223 MYBBP1AQ9BQG0 1328 aaKnown RBP18.6■□□□□ 0.57
HCFC2-202ENST00000544223 WAPLQ7Z5K2 1190 aa18.59■□□□□ 0.57
HCFC2-202ENST00000544223 KDM5AP29375 1690 aaKnown RBP18.59■□□□□ 0.57
HCFC2-202ENST00000544223 TNRQ92752 1358 aa18.59■□□□□ 0.57
HCFC2-202ENST00000544223 SALL2Q9Y467 1007 aaPredicted RBP18.59■□□□□ 0.57
HCFC2-202ENST00000544223 PNISRQ8TF01 805 aaKnown RBP18.58■□□□□ 0.57
HCFC2-202ENST00000544223 PARD3Q8TEW0 1356 aa18.58■□□□□ 0.56
HCFC2-202ENST00000544223 ARHGEF28Q8N1W1 1705 aaKnown RBP18.58■□□□□ 0.56
HCFC2-202ENST00000544223 RALBP1Q15311 655 aa18.57■□□□□ 0.56
HCFC2-202ENST00000544223 CDCA8Q53HL2 280 aa18.57■□□□□ 0.56
HCFC2-202ENST00000544223 AMER1Q5JTC6 1135 aaPredicted RBP18.57■□□□□ 0.56
HCFC2-202ENST00000544223 ALKQ9UM73 1620 aa18.57■□□□□ 0.56
HCFC2-202ENST00000544223 TNNT2P45379 298 aaPredicted RBP18.55■□□□□ 0.56
HCFC2-202ENST00000544223 POGKQ9P215 609 aa18.55■□□□□ 0.56
HCFC2-202ENST00000544223 MYO3AQ8NEV4 1616 aa18.55■□□□□ 0.56
HCFC2-202ENST00000544223 ZFYVE9O95405 1425 aa18.55■□□□□ 0.56
HCFC2-202ENST00000544223 PTPRMP28827 1452 aa18.55■□□□□ 0.56
HCFC2-202ENST00000544223 YTHDC2Q9H6S0 1430 aaKnown RBP18.54■□□□□ 0.56
HCFC2-202ENST00000544223 PLEKHH1Q9ULM0 1364 aa18.54■□□□□ 0.56
HCFC2-202ENST00000544223 LTKP29376 864 aa18.54■□□□□ 0.56
HCFC2-202ENST00000544223 METP08581 1390 aa18.53■□□□□ 0.56
HCFC2-202ENST00000544223 SRPK2P78362 688 aaKnown RBP18.53■□□□□ 0.56
HCFC2-202ENST00000544223 TULP4Q9NRJ4 1543 aa18.52■□□□□ 0.56
HCFC2-202ENST00000544223 TXNDC2Q86VQ3 553 aa18.52■□□□□ 0.55
HCFC2-202ENST00000544223 NLRP13Q86W25 1043 aa18.52■□□□□ 0.55
HCFC2-202ENST00000544223 C3P01024 1663 aa18.51■□□□□ 0.55
HCFC2-202ENST00000544223 SLC26A8Q96RN1 970 aa18.51■□□□□ 0.55
HCFC2-202ENST00000544223 FER1L4A9Z1Z3 1794 aa18.51■□□□□ 0.55
HCFC2-202ENST00000544223 IRX6P78412 446 aaPredicted RBP18.5■□□□□ 0.55
HCFC2-202ENST00000544223 PPP2R1AP30153 589 aa18.49■□□□□ 0.55
HCFC2-202ENST00000544223 UBR1Q8IWV7 1749 aa18.49■□□□□ 0.55
HCFC2-202ENST00000544223 BRD4O60885 1362 aaPredicted RBP18.49■□□□□ 0.55
HCFC2-202ENST00000544223 EVC2Q86UK5 1308 aa18.48■□□□□ 0.55
HCFC2-202ENST00000544223 SBNO2Q9Y2G9 1366 aa18.48■□□□□ 0.55
HCFC2-202ENST00000544223 NRXN3Q9Y4C0 1643 aa18.48■□□□□ 0.55
HCFC2-202ENST00000544223 SUPT16HQ9Y5B9 1047 aaKnown RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms