RNA–Protein interactions for RNA: ENST00000544004.1

AP000439.1-201, humanhuman

TSL 4 BASIC

Gene AP000439.1, Length 581 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000439.1-201ENST00000544004 CROCC2H7BZ55 1655 aa17.95■□□□□ 0.46
AP000439.1-201ENST00000544004 FGD6Q6ZV73 1430 aa17.95■□□□□ 0.46
AP000439.1-201ENST00000544004 SHPRHQ149N8 1683 aa17.93■□□□□ 0.46
AP000439.1-201ENST00000544004 LMTK2Q8IWU2 1503 aa17.93■□□□□ 0.46
AP000439.1-201ENST00000544004 RXRBP28702 533 aa17.92■□□□□ 0.46
AP000439.1-201ENST00000544004 ABCC5O15440 1437 aa17.91■□□□□ 0.46
AP000439.1-201ENST00000544004 NOS1P29475 1434 aa17.91■□□□□ 0.46
AP000439.1-201ENST00000544004 KANK4Q5T7N3 995 aaPredicted RBP17.91■□□□□ 0.46
AP000439.1-201ENST00000544004 AHDC1Q5TGY3 1603 aaPredicted RBP17.9■□□□□ 0.46
AP000439.1-201ENST00000544004 MYO5BQ9ULV0 1848 aa17.89■□□□□ 0.45
AP000439.1-201ENST00000544004 C14orf37Q86TY3 774 aa17.89■□□□□ 0.45
AP000439.1-201ENST00000544004 SLC52A1Q9NWF4 448 aa17.89■□□□□ 0.45
AP000439.1-201ENST00000544004 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.88■□□□□ 0.45
AP000439.1-201ENST00000544004 PLEKHG1Q9ULL1 1385 aa17.88■□□□□ 0.45
AP000439.1-201ENST00000544004 NCOA3Q9Y6Q9 1424 aa17.88■□□□□ 0.45
AP000439.1-201ENST00000544004 CDK12Q9NYV4 1490 aaPredicted RBP17.88■□□□□ 0.45
AP000439.1-201ENST00000544004 ZFYVE9O95405 1425 aa17.87■□□□□ 0.45
AP000439.1-201ENST00000544004 NUTM2BA6NNL0 878 aaPredicted RBP17.86■□□□□ 0.45
AP000439.1-201ENST00000544004 NUTM2EB1AL46 878 aaPredicted RBP17.86■□□□□ 0.45
AP000439.1-201ENST00000544004 PPP1R15AO75807 674 aaPredicted RBP17.86■□□□□ 0.45
AP000439.1-201ENST00000544004 NUTM2AQ8IVF1 878 aaPredicted RBP17.86■□□□□ 0.45
AP000439.1-201ENST00000544004 VPS8Q8N3P4 1428 aa17.86■□□□□ 0.45
AP000439.1-201ENST00000544004 DAPK1P53355 1430 aa17.85■□□□□ 0.45
AP000439.1-201ENST00000544004 CADPS2Q86UW7 1296 aa17.85■□□□□ 0.45
AP000439.1-201ENST00000544004 GCC2Q8IWJ2 1684 aa17.85■□□□□ 0.45
AP000439.1-201ENST00000544004 PTPN23Q9H3S7 1636 aa17.85■□□□□ 0.45
AP000439.1-201ENST00000544004 RIMS2Q9UQ26 1411 aa17.84■□□□□ 0.45
AP000439.1-201ENST00000544004 ATF3P18847 181 aa17.84■□□□□ 0.45
AP000439.1-201ENST00000544004 HDGFP51858 240 aaKnown RBP17.84■□□□□ 0.45
AP000439.1-201ENST00000544004 TBX22Q9Y458 520 aa17.84■□□□□ 0.45
AP000439.1-201ENST00000544004 DIP2AQ14689 1571 aa17.83■□□□□ 0.45
AP000439.1-201ENST00000544004 AFF2P51816 1311 aa17.83■□□□□ 0.44
AP000439.1-201ENST00000544004 C19orf44Q9H6X5 657 aa17.83■□□□□ 0.44
AP000439.1-201ENST00000544004 CHIC2Q9UKJ5 165 aa17.82■□□□□ 0.44
AP000439.1-201ENST00000544004 ANKRD30AQ9BXX3 1397 aa17.81■□□□□ 0.44
AP000439.1-201ENST00000544004 TMEM131LA2VDJ0 1609 aa17.81■□□□□ 0.44
AP000439.1-201ENST00000544004 BRINP3Q76B58 766 aa17.8■□□□□ 0.44
AP000439.1-201ENST00000544004 SRCAPQ6ZRS2 3230 aa17.79■□□□□ 0.44
AP000439.1-201ENST00000544004 RPRD2Q5VT52 1461 aaKnown RBP17.79■□□□□ 0.44
AP000439.1-201ENST00000544004 RGS12O14924 1447 aa17.78■□□□□ 0.44
AP000439.1-201ENST00000544004 ADAMTS13Q76LX8 1427 aa17.78■□□□□ 0.44
AP000439.1-201ENST00000544004 NUTM2DQ5VT03 806 aaPredicted RBP17.77■□□□□ 0.44
AP000439.1-201ENST00000544004 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.77■□□□□ 0.44
AP000439.1-201ENST00000544004 CHGAP10645 457 aaKnown RBP17.76■□□□□ 0.43
AP000439.1-201ENST00000544004 RBM6P78332 1123 aaKnown RBP17.76■□□□□ 0.43
AP000439.1-201ENST00000544004 QTRT2Q9H974 415 aaKnown RBP17.76■□□□□ 0.43
AP000439.1-201ENST00000544004 PIK3R4Q99570 1358 aa17.76■□□□□ 0.43
AP000439.1-201ENST00000544004 SETD5Q9C0A6 1442 aa17.75■□□□□ 0.43
AP000439.1-201ENST00000544004 ASXL1Q8IXJ9 1541 aa17.74■□□□□ 0.43
AP000439.1-201ENST00000544004 NHSL1Q5SYE7 1610 aa17.74■□□□□ 0.43
AP000439.1-201ENST00000544004 C8orf37Q96NL8 207 aa17.74■□□□□ 0.43
AP000439.1-201ENST00000544004 AMOTL2Q9Y2J4 779 aa17.73■□□□□ 0.43
AP000439.1-201ENST00000544004 LRRC59Q96AG4 307 aaKnown RBP17.72■□□□□ 0.43
AP000439.1-201ENST00000544004 TRPM2O94759 1503 aa17.72■□□□□ 0.43
AP000439.1-201ENST00000544004 PTPRUQ92729 1446 aa17.72■□□□□ 0.43
AP000439.1-201ENST00000544004 DCCP43146 1447 aa17.71■□□□□ 0.43
AP000439.1-201ENST00000544004 MST1RQ04912 1400 aa17.69■□□□□ 0.42
AP000439.1-201ENST00000544004 ADGRL2O95490 1459 aa17.69■□□□□ 0.42
AP000439.1-201ENST00000544004 ANKRD50Q9ULJ7 1429 aa17.68■□□□□ 0.42
AP000439.1-201ENST00000544004 ATAD2Q6PL18 1390 aa17.67■□□□□ 0.42
AP000439.1-201ENST00000544004 PNPLA6Q8IY17 1366 aa17.67■□□□□ 0.42
AP000439.1-201ENST00000544004 DDX17Q92841 729 aaKnown RBP17.67■□□□□ 0.42
AP000439.1-201ENST00000544004 NGLY1Q96IV0 654 aa17.67■□□□□ 0.42
AP000439.1-201ENST00000544004 UNC13BO14795 1591 aa17.66■□□□□ 0.42
AP000439.1-201ENST00000544004 E9PCH4 1651 aa17.66■□□□□ 0.42
AP000439.1-201ENST00000544004 XRN1Q8IZH2 1706 aaKnown RBP17.66■□□□□ 0.42
AP000439.1-201ENST00000544004 ADAMTS2O95450 1211 aa17.65■□□□□ 0.42
AP000439.1-201ENST00000544004 ZRANB1Q9UGI0 708 aa17.65■□□□□ 0.42
AP000439.1-201ENST00000544004 LOC105371045A0A1W2PR82 267 aa17.64■□□□□ 0.41
AP000439.1-201ENST00000544004 APLP2Q06481 763 aa17.64■□□□□ 0.41
AP000439.1-201ENST00000544004 FOXD1Q16676 465 aa17.64■□□□□ 0.41
AP000439.1-201ENST00000544004 SETBP1Q9Y6X0 1596 aa17.62■□□□□ 0.41
AP000439.1-201ENST00000544004 NRXN3Q9Y4C0 1643 aa17.62■□□□□ 0.41
AP000439.1-201ENST00000544004 USP21Q9UK80 565 aa17.61■□□□□ 0.41
AP000439.1-201ENST00000544004 NALCNQ8IZF0 1738 aa17.59■□□□□ 0.41
AP000439.1-201ENST00000544004 TRPC5Q9UL62 973 aaPredicted RBP17.59■□□□□ 0.41
AP000439.1-201ENST00000544004 ADGRL3Q9HAR2 1447 aa17.58■□□□□ 0.41
AP000439.1-201ENST00000544004 FAM50AQ14320 339 aaKnown RBP17.58■□□□□ 0.4
AP000439.1-201ENST00000544004 EP400Q96L91 3159 aa17.56■□□□□ 0.4
AP000439.1-201ENST00000544004 METP08581 1390 aa17.56■□□□□ 0.4
AP000439.1-201ENST00000544004 LAMC1P11047 1609 aa17.55■□□□□ 0.4
AP000439.1-201ENST00000544004 IQGAP3Q86VI3 1631 aa17.55■□□□□ 0.4
AP000439.1-201ENST00000544004 FNBP4Q8N3X1 1017 aaPredicted RBP17.55■□□□□ 0.4
AP000439.1-201ENST00000544004 CCDC125Q86Z20 511 aa17.54■□□□□ 0.4
AP000439.1-201ENST00000544004 C1orf167Q5SNV9 1468 aa17.54■□□□□ 0.4
AP000439.1-201ENST00000544004 ATRNO75882 1429 aa17.54■□□□□ 0.4
AP000439.1-201ENST00000544004 PTCH1Q13635 1447 aa17.54■□□□□ 0.4
AP000439.1-201ENST00000544004 SOS2Q07890 1332 aaPredicted RBP17.53■□□□□ 0.4
AP000439.1-201ENST00000544004 ZNF326Q5BKZ1 582 aaKnown RBP17.51■□□□□ 0.39
AP000439.1-201ENST00000544004 ORAI2Q96SN7 254 aa17.51■□□□□ 0.39
AP000439.1-201ENST00000544004 COL22A1Q8NFW1 1626 aaPredicted RBP17.5■□□□□ 0.39
AP000439.1-201ENST00000544004 SPHKAPQ2M3C7 1700 aa17.48■□□□□ 0.39
AP000439.1-201ENST00000544004 NUP155O75694 1391 aa17.48■□□□□ 0.39
AP000439.1-201ENST00000544004 MARF1Q9Y4F3 1742 aaKnown RBP17.47■□□□□ 0.39
AP000439.1-201ENST00000544004 BCL9LQ86UU0 1499 aa17.47■□□□□ 0.39
AP000439.1-201ENST00000544004 GJD4Q96KN9 370 aaPredicted RBP17.45■□□□□ 0.38
AP000439.1-201ENST00000544004 NEXMIFQ5QGS0 1516 aa17.44■□□□□ 0.38
AP000439.1-201ENST00000544004 MYOM2P54296 1465 aa17.44■□□□□ 0.38
AP000439.1-201ENST00000544004 BLMP54132 1417 aaPredicted RBP17.43■□□□□ 0.38
AP000439.1-201ENST00000544004 ROCK1Q13464 1354 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms