RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 PIAS4Q8N2W9 510 aaPredicted RBP10.81□□□□□ -0.68
NUP43-206ENST00000543637 E9PCH4 1651 aa10.8□□□□□ -0.68
NUP43-206ENST00000543637 IQGAP3Q86VI3 1631 aa10.8□□□□□ -0.68
NUP43-206ENST00000543637 ADGRB3O60242 1522 aa10.79□□□□□ -0.68
NUP43-206ENST00000543637 PROSER2Q86WR7 435 aaPredicted RBP10.79□□□□□ -0.68
NUP43-206ENST00000543637 SLC26A8Q96RN1 970 aa10.79□□□□□ -0.68
NUP43-206ENST00000543637 KCNA6P17658 529 aa10.78□□□□□ -0.68
NUP43-206ENST00000543637 TRIM52Q96A61 297 aa10.78□□□□□ -0.68
NUP43-206ENST00000543637 LRRC7Q96NW7 1537 aa10.78□□□□□ -0.68
NUP43-206ENST00000543637 ADRA2BP18089 450 aa10.77□□□□□ -0.69
NUP43-206ENST00000543637 HSPA1LP34931 641 aa10.76□□□□□ -0.69
NUP43-206ENST00000543637 ZNF326Q5BKZ1 582 aaKnown RBP10.76□□□□□ -0.69
NUP43-206ENST00000543637 TMEM131LA2VDJ0 1609 aa10.76□□□□□ -0.69
NUP43-206ENST00000543637 RRBP1Q9P2E9 1410 aaKnown RBP10.75□□□□□ -0.69
NUP43-206ENST00000543637 RIMS2Q9UQ26 1411 aa10.75□□□□□ -0.69
NUP43-206ENST00000543637 XIRP1Q702N8 1843 aaKnown RBP10.75□□□□□ -0.69
NUP43-206ENST00000543637 SPHKAPQ2M3C7 1700 aa10.75□□□□□ -0.69
NUP43-206ENST00000543637 CHD2O14647 1828 aaKnown RBP10.74□□□□□ -0.69
NUP43-206ENST00000543637 NUTM2DQ5VT03 806 aaPredicted RBP10.74□□□□□ -0.69
NUP43-206ENST00000543637 TBX22Q9Y458 520 aa10.74□□□□□ -0.69
NUP43-206ENST00000543637 KIF1BO60333 1816 aa10.74□□□□□ -0.69
NUP43-206ENST00000543637 PLEKHG1Q9ULL1 1385 aa10.74□□□□□ -0.69
NUP43-206ENST00000543637 C14orf37Q86TY3 774 aa10.72□□□□□ -0.69
NUP43-206ENST00000543637 ZFYVE9O95405 1425 aa10.71□□□□□ -0.69
NUP43-206ENST00000543637 TMEM94Q12767 1356 aa10.71□□□□□ -0.69
NUP43-206ENST00000543637 NAIPQ13075 1403 aa10.7□□□□□ -0.7
NUP43-206ENST00000543637 MSH6P52701 1360 aa10.7□□□□□ -0.7
NUP43-206ENST00000543637 ACIN1Q9UKV3 1341 aaKnown RBP10.7□□□□□ -0.7
NUP43-206ENST00000543637 RBM33Q96EV2 1170 aaKnown RBP10.7□□□□□ -0.7
NUP43-206ENST00000543637 SLC4A1APQ9BWU0 796 aaKnown RBP10.7□□□□□ -0.7
NUP43-206ENST00000543637 NKTRP30414 1462 aaKnown RBP10.68□□□□□ -0.7
NUP43-206ENST00000543637 ILDR2Q71H61 639 aa10.68□□□□□ -0.7
NUP43-206ENST00000543637 DIP2AQ14689 1571 aa10.68□□□□□ -0.7
NUP43-206ENST00000543637 PIK3R4Q99570 1358 aa10.67□□□□□ -0.7
NUP43-206ENST00000543637 VGFO15240 615 aaPredicted RBP10.67□□□□□ -0.7
NUP43-206ENST00000543637 ATF3P18847 181 aa10.67□□□□□ -0.7
NUP43-206ENST00000543637 SLAIN2Q9P270 581 aa10.67□□□□□ -0.7
NUP43-206ENST00000543637 AMOTL2Q9Y2J4 779 aa10.67□□□□□ -0.7
NUP43-206ENST00000543637 NWD1Q149M9 1564 aa10.67□□□□□ -0.7
NUP43-206ENST00000543637 TRPM2O94759 1503 aa10.67□□□□□ -0.7
NUP43-206ENST00000543637 HFM1A2PYH4 1435 aa10.67□□□□□ -0.7
NUP43-206ENST00000543637 FAM135BQ49AJ0 1406 aa10.67□□□□□ -0.7
NUP43-206ENST00000543637 ALKQ9UM73 1620 aa10.66□□□□□ -0.7
NUP43-206ENST00000543637 C19orf44Q9H6X5 657 aa10.66□□□□□ -0.7
NUP43-206ENST00000543637 NCOA3Q9Y6Q9 1424 aa10.66□□□□□ -0.7
NUP43-206ENST00000543637 SOCS7O14512 581 aa10.65□□□□□ -0.7
NUP43-206ENST00000543637 CLTCL1P53675 1640 aa10.65□□□□□ -0.7
NUP43-206ENST00000543637 ROBO1Q9Y6N7 1651 aa10.64□□□□□ -0.71
NUP43-206ENST00000543637 CADPS2Q86UW7 1296 aa10.64□□□□□ -0.71
NUP43-206ENST00000543637 MED1Q15648 1581 aaPredicted RBP10.64□□□□□ -0.71
NUP43-206ENST00000543637 RPGRIP1LQ68CZ1 1315 aa10.63□□□□□ -0.71
NUP43-206ENST00000543637 ADAMTS13Q76LX8 1427 aa10.63□□□□□ -0.71
NUP43-206ENST00000543637 PHLPP1O60346 1717 aa10.63□□□□□ -0.71
NUP43-206ENST00000543637 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.62□□□□□ -0.71
NUP43-206ENST00000543637 MPHOSPH9Q99550 1183 aa10.61□□□□□ -0.71
NUP43-206ENST00000543637 SETBP1Q9Y6X0 1596 aa10.6□□□□□ -0.71
NUP43-206ENST00000543637 RGL3Q3MIN7 710 aa10.6□□□□□ -0.71
NUP43-206ENST00000543637 NEXMIFQ5QGS0 1516 aa10.59□□□□□ -0.71
NUP43-206ENST00000543637 PPLO60437 1756 aa10.59□□□□□ -0.71
NUP43-206ENST00000543637 CCDC144AA2RUR9 1427 aa10.58□□□□□ -0.72
NUP43-206ENST00000543637 NRXN3Q9Y4C0 1643 aa10.58□□□□□ -0.72
NUP43-206ENST00000543637 PTPRUQ92729 1446 aa10.58□□□□□ -0.72
NUP43-206ENST00000543637 SETD5Q9C0A6 1442 aa10.58□□□□□ -0.72
NUP43-206ENST00000543637 METP08581 1390 aa10.57□□□□□ -0.72
NUP43-206ENST00000543637 JCADQ9P266 1359 aa10.56□□□□□ -0.72
NUP43-206ENST00000543637 XRN1Q8IZH2 1706 aaKnown RBP10.55□□□□□ -0.72
NUP43-206ENST00000543637 MEX3CQ5U5Q3 659 aaKnown RBP10.55□□□□□ -0.72
NUP43-206ENST00000543637 DCCP43146 1447 aa10.54□□□□□ -0.72
NUP43-206ENST00000543637 ANKRD30BQ9BXX2 1392 aa10.53□□□□□ -0.72
NUP43-206ENST00000543637 BRINP3Q76B58 766 aa10.53□□□□□ -0.72
NUP43-206ENST00000543637 LRRC59Q96AG4 307 aaKnown RBP10.53□□□□□ -0.72
NUP43-206ENST00000543637 SPATA31A6Q5VVP1 1343 aa10.53□□□□□ -0.72
NUP43-206ENST00000543637 ADGRL3Q9HAR2 1447 aa10.51□□□□□ -0.73
NUP43-206ENST00000543637 STK26Q9P289 416 aa10.51□□□□□ -0.73
NUP43-206ENST00000543637 ADGRF5Q8IZF2 1346 aa10.51□□□□□ -0.73
NUP43-206ENST00000543637 COL16A1Q07092 1604 aaPredicted RBP10.51□□□□□ -0.73
NUP43-206ENST00000543637 AHDC1Q5TGY3 1603 aaPredicted RBP10.51□□□□□ -0.73
NUP43-206ENST00000543637 SETD1AO15047 1707 aaKnown RBP10.5□□□□□ -0.73
NUP43-206ENST00000543637 NALCNQ8IZF0 1738 aa10.5□□□□□ -0.73
NUP43-206ENST00000543637 IFT172Q9UG01 1749 aa10.5□□□□□ -0.73
NUP43-206ENST00000543637 NUTM2BA6NNL0 878 aaPredicted RBP10.5□□□□□ -0.73
NUP43-206ENST00000543637 NUTM2EB1AL46 878 aaPredicted RBP10.5□□□□□ -0.73
NUP43-206ENST00000543637 HRCP23327 699 aa10.5□□□□□ -0.73
NUP43-206ENST00000543637 NUTM2AQ8IVF1 878 aaPredicted RBP10.5□□□□□ -0.73
NUP43-206ENST00000543637 SHPRHQ149N8 1683 aa10.5□□□□□ -0.73
NUP43-206ENST00000543637 RAB3GAP2Q9H2M9 1393 aa10.5□□□□□ -0.73
NUP43-206ENST00000543637 ZNF772Q68DY9 489 aaPredicted RBP10.49□□□□□ -0.73
NUP43-206ENST00000543637 MST1RQ04912 1400 aa10.49□□□□□ -0.73
NUP43-206ENST00000543637 TMEM132EQ6IEE7 984 aa10.48□□□□□ -0.73
NUP43-206ENST00000543637 RGS17Q9UGC6 210 aaPredicted RBP10.48□□□□□ -0.73
NUP43-206ENST00000543637 PTCH1Q13635 1447 aa10.48□□□□□ -0.73
NUP43-206ENST00000543637 NHSL1Q5SYE7 1610 aa10.47□□□□□ -0.73
NUP43-206ENST00000543637 ESCO1Q5FWF5 840 aa10.47□□□□□ -0.73
NUP43-206ENST00000543637 DHX57Q6P158 1386 aaKnown RBP10.47□□□□□ -0.73
NUP43-206ENST00000543637 ROBO2Q9HCK4 1378 aa10.47□□□□□ -0.73
NUP43-206ENST00000543637 SPATA31E1Q6ZUB1 1445 aa10.47□□□□□ -0.73
NUP43-206ENST00000543637 ASXL1Q8IXJ9 1541 aa10.47□□□□□ -0.73
NUP43-206ENST00000543637 POTEAQ6S8J7 498 aa10.46□□□□□ -0.73
NUP43-206ENST00000543637 STAC3Q96MF2 364 aa10.46□□□□□ -0.73
NUP43-206ENST00000543637 ORAI2Q96SN7 254 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms