RNA–Protein interactions for RNA: ENST00000543462.1

VEGFB-204, Transcript of vascular endothelial growth factor B, humanhuman

TSL 2

Gene VEGFB, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-204ENST00000543462 RIMS2Q9UQ26 1411 aa14.71□□□□□ -0.05
VEGFB-204ENST00000543462 DHX57Q6P158 1386 aaKnown RBP14.71□□□□□ -0.06
VEGFB-204ENST00000543462 NPHP4O75161 1426 aaPredicted RBP14.7□□□□□ -0.06
VEGFB-204ENST00000543462 LTBP4Q8N2S1 1624 aa14.7□□□□□ -0.06
VEGFB-204ENST00000543462 NCKAP5LQ9HCH0 1330 aa14.69□□□□□ -0.06
VEGFB-204ENST00000543462 DIP2AQ14689 1571 aa14.69□□□□□ -0.06
VEGFB-204ENST00000543462 LTKP29376 864 aa14.69□□□□□ -0.06
VEGFB-204ENST00000543462 NWD1Q149M9 1564 aa14.68□□□□□ -0.06
VEGFB-204ENST00000543462 CHD2O14647 1828 aaKnown RBP14.66□□□□□ -0.06
VEGFB-204ENST00000543462 PLEKHG1Q9ULL1 1385 aa14.66□□□□□ -0.06
VEGFB-204ENST00000543462 ADAMTS13Q76LX8 1427 aa14.66□□□□□ -0.06
VEGFB-204ENST00000543462 MYOM2P54296 1465 aa14.65□□□□□ -0.06
VEGFB-204ENST00000543462 NRXN1Q9ULB1 1477 aa14.65□□□□□ -0.06
VEGFB-204ENST00000543462 ANKLE2Q86XL3 938 aa14.65□□□□□ -0.06
VEGFB-204ENST00000543462 XIRP1Q702N8 1843 aaKnown RBP14.64□□□□□ -0.07
VEGFB-204ENST00000543462 XRN1Q8IZH2 1706 aaKnown RBP14.64□□□□□ -0.07
VEGFB-204ENST00000543462 TXNDC2Q86VQ3 553 aa14.62□□□□□ -0.07
VEGFB-204ENST00000543462 STAG3Q9UJ98 1225 aa14.62□□□□□ -0.07
VEGFB-204ENST00000543462 DMRT2Q9Y5R5 561 aa14.62□□□□□ -0.07
VEGFB-204ENST00000543462 LAMC1P11047 1609 aa14.62□□□□□ -0.07
VEGFB-204ENST00000543462 ASXL1Q8IXJ9 1541 aa14.61□□□□□ -0.07
VEGFB-204ENST00000543462 RPGRIP1LQ68CZ1 1315 aa14.6□□□□□ -0.07
VEGFB-204ENST00000543462 ALKQ9UM73 1620 aa14.59□□□□□ -0.07
VEGFB-204ENST00000543462 PIK3C2GO75747 1445 aa14.59□□□□□ -0.07
VEGFB-204ENST00000543462 PCGF6Q9BYE7 350 aa14.59□□□□□ -0.07
VEGFB-204ENST00000543462 EID1Q9Y6B2 187 aa14.59□□□□□ -0.07
VEGFB-204ENST00000543462 PRAG1Q86YV5 1406 aa14.58□□□□□ -0.07
VEGFB-204ENST00000543462 CPS1P31327 1500 aa14.58□□□□□ -0.08
VEGFB-204ENST00000543462 CHGAP10645 457 aaKnown RBP14.58□□□□□ -0.08
VEGFB-204ENST00000543462 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.58□□□□□ -0.08
VEGFB-204ENST00000543462 KNDC1Q76NI1 1749 aa14.58□□□□□ -0.08
VEGFB-204ENST00000543462 KIAA1210Q9ULL0 1709 aa14.58□□□□□ -0.08
VEGFB-204ENST00000543462 NKTRP30414 1462 aaKnown RBP14.57□□□□□ -0.08
VEGFB-204ENST00000543462 IQSEC2Q5JU85 1478 aa14.56□□□□□ -0.08
VEGFB-204ENST00000543462 ZNF335Q9H4Z2 1342 aaPredicted RBP14.55□□□□□ -0.08
VEGFB-204ENST00000543462 PIK3R4Q99570 1358 aa14.55□□□□□ -0.08
VEGFB-204ENST00000543462 PTPRUQ92729 1446 aa14.54□□□□□ -0.08
VEGFB-204ENST00000543462 ADGRB1O14514 1584 aa14.53□□□□□ -0.08
VEGFB-204ENST00000543462 LRRC7Q96NW7 1537 aa14.53□□□□□ -0.08
VEGFB-204ENST00000543462 ADGRF5Q8IZF2 1346 aa14.53□□□□□ -0.08
VEGFB-204ENST00000543462 HDGFP51858 240 aaKnown RBP14.53□□□□□ -0.08
VEGFB-204ENST00000543462 ZNF326Q5BKZ1 582 aaKnown RBP14.53□□□□□ -0.08
VEGFB-204ENST00000543462 NUTM2DQ5VT03 806 aaPredicted RBP14.53□□□□□ -0.08
VEGFB-204ENST00000543462 TBX22Q9Y458 520 aa14.52□□□□□ -0.09
VEGFB-204ENST00000543462 METP08581 1390 aa14.51□□□□□ -0.09
VEGFB-204ENST00000543462 PPP1R15AO75807 674 aaPredicted RBP14.51□□□□□ -0.09
VEGFB-204ENST00000543462 TRPM1Q7Z4N2 1603 aa14.51□□□□□ -0.09
VEGFB-204ENST00000543462 VGFO15240 615 aaPredicted RBP14.5□□□□□ -0.09
VEGFB-204ENST00000543462 SLC26A8Q96RN1 970 aa14.5□□□□□ -0.09
VEGFB-204ENST00000543462 NALCNQ8IZF0 1738 aa14.49□□□□□ -0.09
VEGFB-204ENST00000543462 RGL3Q3MIN7 710 aa14.49□□□□□ -0.09
VEGFB-204ENST00000543462 TECPR2O15040 1411 aa14.49□□□□□ -0.09
VEGFB-204ENST00000543462 SIN3AQ96ST3 1273 aa14.48□□□□□ -0.09
VEGFB-204ENST00000543462 PTCH1Q13635 1447 aa14.48□□□□□ -0.09
VEGFB-204ENST00000543462 CLSPNQ9HAW4 1339 aa14.47□□□□□ -0.09
VEGFB-204ENST00000543462 ARHGEF28Q8N1W1 1705 aaKnown RBP14.47□□□□□ -0.09
VEGFB-204ENST00000543462 KCNA6P17658 529 aa14.46□□□□□ -0.09
VEGFB-204ENST00000543462 STAC3Q96MF2 364 aa14.46□□□□□ -0.09
VEGFB-204ENST00000543462 DLC1Q96QB1 1528 aa14.45□□□□□ -0.1
VEGFB-204ENST00000543462 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.44□□□□□ -0.1
VEGFB-204ENST00000543462 CERKQ8TCT0 537 aa14.43□□□□□ -0.1
VEGFB-204ENST00000543462 C14orf93Q9H972 538 aaKnown RBP14.43□□□□□ -0.1
VEGFB-204ENST00000543462 NCOA3Q9Y6Q9 1424 aa14.42□□□□□ -0.1
VEGFB-204ENST00000543462 DCAF11Q8TEB1 546 aa14.42□□□□□ -0.1
VEGFB-204ENST00000543462 L3MBTL2Q969R5 705 aa14.42□□□□□ -0.1
VEGFB-204ENST00000543462 LRPPRCP42704 1394 aaKnown RBP14.42□□□□□ -0.1
VEGFB-204ENST00000543462 YTHDC2Q9H6S0 1430 aaKnown RBP14.41□□□□□ -0.1
VEGFB-204ENST00000543462 SENP3Q9H4L4 574 aaPredicted RBP14.41□□□□□ -0.1
VEGFB-204ENST00000543462 ADGRB2O60241 1585 aa14.4□□□□□ -0.1
VEGFB-204ENST00000543462 TMEM94Q12767 1356 aa14.4□□□□□ -0.1
VEGFB-204ENST00000543462 ABCC11Q96J66 1382 aa14.4□□□□□ -0.1
VEGFB-204ENST00000543462 ROBO2Q9HCK4 1378 aa14.4□□□□□ -0.1
VEGFB-204ENST00000543462 CDC42BPGQ6DT37 1551 aa14.39□□□□□ -0.11
VEGFB-204ENST00000543462 RALGAPBQ86X10 1494 aa14.38□□□□□ -0.11
VEGFB-204ENST00000543462 CFAP70Q5T0N1 1121 aa14.38□□□□□ -0.11
VEGFB-204ENST00000543462 BCANQ96GW7 911 aa14.38□□□□□ -0.11
VEGFB-204ENST00000543462 AMOTL2Q9Y2J4 779 aa14.38□□□□□ -0.11
VEGFB-204ENST00000543462 FAM135BQ49AJ0 1406 aa14.38□□□□□ -0.11
VEGFB-204ENST00000543462 ADGRL3Q9HAR2 1447 aa14.38□□□□□ -0.11
VEGFB-204ENST00000543462 DCCP43146 1447 aa14.37□□□□□ -0.11
VEGFB-204ENST00000543462 GPRASP1Q5JY77 1395 aa14.36□□□□□ -0.11
VEGFB-204ENST00000543462 FMN2Q9NZ56 1722 aa14.36□□□□□ -0.11
VEGFB-204ENST00000543462 NEUROD1Q13562 356 aa14.36□□□□□ -0.11
VEGFB-204ENST00000543462 TONSLQ96HA7 1378 aa14.35□□□□□ -0.11
VEGFB-204ENST00000543462 KDM2AQ9Y2K7 1162 aa14.35□□□□□ -0.11
VEGFB-204ENST00000543462 QRICH2Q9H0J4 1663 aa14.34□□□□□ -0.11
VEGFB-204ENST00000543462 TMEM132EQ6IEE7 984 aa14.34□□□□□ -0.11
VEGFB-204ENST00000543462 NBPF8Q3BBV2 869 aa14.33□□□□□ -0.12
VEGFB-204ENST00000543462 PLEKHH1Q9ULM0 1364 aa14.33□□□□□ -0.12
VEGFB-204ENST00000543462 PROSER2Q86WR7 435 aaPredicted RBP14.32□□□□□ -0.12
VEGFB-204ENST00000543462 SIRT1Q96EB6 747 aa14.32□□□□□ -0.12
VEGFB-204ENST00000543462 ROBO1Q9Y6N7 1651 aa14.32□□□□□ -0.12
VEGFB-204ENST00000543462 USP32Q8NFA0 1604 aa14.31□□□□□ -0.12
VEGFB-204ENST00000543462 RGPD8O14715 1765 aaPredicted RBP14.31□□□□□ -0.12
VEGFB-204ENST00000543462 NHSL1Q5SYE7 1610 aa14.3□□□□□ -0.12
VEGFB-204ENST00000543462 NBPF1Q3BBV0 1214 aa14.3□□□□□ -0.12
VEGFB-204ENST00000543462 RBM33Q96EV2 1170 aaKnown RBP14.3□□□□□ -0.12
VEGFB-204ENST00000543462 TIMELESSQ9UNS1 1208 aa14.3□□□□□ -0.12
VEGFB-204ENST00000543462 MSH6P52701 1360 aa14.3□□□□□ -0.12
VEGFB-204ENST00000543462 MST1RQ04912 1400 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms