RNA–Protein interactions for RNA: ENST00000542930.1

C2CD3-219, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 524 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-219ENST00000542930 KIF15Q9NS87 1388 aa15□□□□□ -0.01
C2CD3-219ENST00000542930 SHPRHQ149N8 1683 aa15□□□□□ -0.01
C2CD3-219ENST00000542930 MYOM3Q5VTT5 1437 aa15□□□□□ -0.01
C2CD3-219ENST00000542930 AHDC1Q5TGY3 1603 aaPredicted RBP14.99□□□□□ -0.01
C2CD3-219ENST00000542930 CADPS2Q86UW7 1296 aa14.99□□□□□ -0.01
C2CD3-219ENST00000542930 SLC52A1Q9NWF4 448 aa14.98□□□□□ -0.01
C2CD3-219ENST00000542930 ADGRB3O60242 1522 aa14.97□□□□□ -0.01
C2CD3-219ENST00000542930 LMTK2Q8IWU2 1503 aa14.97□□□□□ -0.01
C2CD3-219ENST00000542930 CHD2O14647 1828 aaKnown RBP14.97□□□□□ -0.01
C2CD3-219ENST00000542930 C14orf37Q86TY3 774 aa14.97□□□□□ -0.01
C2CD3-219ENST00000542930 C19orf44Q9H6X5 657 aa14.97□□□□□ -0.01
C2CD3-219ENST00000542930 RRP7BPQ9NSQ0 103 aa14.97□□□□□ -0.01
C2CD3-219ENST00000542930 NOS1P29475 1434 aa14.97□□□□□ -0.01
C2CD3-219ENST00000542930 PLEKHG1Q9ULL1 1385 aa14.97□□□□□ -0.01
C2CD3-219ENST00000542930 AFF2P51816 1311 aa14.96□□□□□ -0.01
C2CD3-219ENST00000542930 ATF3P18847 181 aa14.96□□□□□ -0.01
C2CD3-219ENST00000542930 NUTM2BA6NNL0 878 aaPredicted RBP14.95□□□□□ -0.02
C2CD3-219ENST00000542930 NUTM2EB1AL46 878 aaPredicted RBP14.95□□□□□ -0.02
C2CD3-219ENST00000542930 HDGFP51858 240 aaKnown RBP14.95□□□□□ -0.02
C2CD3-219ENST00000542930 NUTM2AQ8IVF1 878 aaPredicted RBP14.95□□□□□ -0.02
C2CD3-219ENST00000542930 TBX22Q9Y458 520 aa14.95□□□□□ -0.02
C2CD3-219ENST00000542930 DIP2AQ14689 1571 aa14.94□□□□□ -0.02
C2CD3-219ENST00000542930 RGS12O14924 1447 aa14.93□□□□□ -0.02
C2CD3-219ENST00000542930 ZFYVE9O95405 1425 aa14.93□□□□□ -0.02
C2CD3-219ENST00000542930 PPP1R15AO75807 674 aaPredicted RBP14.93□□□□□ -0.02
C2CD3-219ENST00000542930 RBM6P78332 1123 aaKnown RBP14.93□□□□□ -0.02
C2CD3-219ENST00000542930 BRINP3Q76B58 766 aa14.93□□□□□ -0.02
C2CD3-219ENST00000542930 QTRT2Q9H974 415 aaKnown RBP14.92□□□□□ -0.02
C2CD3-219ENST00000542930 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.92□□□□□ -0.02
C2CD3-219ENST00000542930 FOXD1Q16676 465 aa14.91□□□□□ -0.02
C2CD3-219ENST00000542930 ABCC5O15440 1437 aa14.91□□□□□ -0.02
C2CD3-219ENST00000542930 RIMS2Q9UQ26 1411 aa14.91□□□□□ -0.02
C2CD3-219ENST00000542930 NUTM2DQ5VT03 806 aaPredicted RBP14.9□□□□□ -0.02
C2CD3-219ENST00000542930 SETD5Q9C0A6 1442 aa14.9□□□□□ -0.02
C2CD3-219ENST00000542930 ZRANB1Q9UGI0 708 aa14.89□□□□□ -0.03
C2CD3-219ENST00000542930 PIK3R4Q99570 1358 aa14.88□□□□□ -0.03
C2CD3-219ENST00000542930 KANK4Q5T7N3 995 aaPredicted RBP14.88□□□□□ -0.03
C2CD3-219ENST00000542930 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.88□□□□□ -0.03
C2CD3-219ENST00000542930 LRRC59Q96AG4 307 aaKnown RBP14.88□□□□□ -0.03
C2CD3-219ENST00000542930 C8orf37Q96NL8 207 aa14.88□□□□□ -0.03
C2CD3-219ENST00000542930 CROCC2H7BZ55 1655 aa14.87□□□□□ -0.03
C2CD3-219ENST00000542930 ATAD2Q6PL18 1390 aa14.87□□□□□ -0.03
C2CD3-219ENST00000542930 ADAMTS13Q76LX8 1427 aa14.87□□□□□ -0.03
C2CD3-219ENST00000542930 NGLY1Q96IV0 654 aa14.87□□□□□ -0.03
C2CD3-219ENST00000542930 EP400Q96L91 3159 aa14.87□□□□□ -0.03
C2CD3-219ENST00000542930 DCCP43146 1447 aa14.86□□□□□ -0.03
C2CD3-219ENST00000542930 RPRD2Q5VT52 1461 aaKnown RBP14.86□□□□□ -0.03
C2CD3-219ENST00000542930 ASXL1Q8IXJ9 1541 aa14.85□□□□□ -0.03
C2CD3-219ENST00000542930 ANKRD30AQ9BXX3 1397 aa14.85□□□□□ -0.03
C2CD3-219ENST00000542930 DAPK1P53355 1430 aa14.84□□□□□ -0.03
C2CD3-219ENST00000542930 TMEM131LA2VDJ0 1609 aa14.84□□□□□ -0.03
C2CD3-219ENST00000542930 AMOTL2Q9Y2J4 779 aa14.83□□□□□ -0.04
C2CD3-219ENST00000542930 VPS8Q8N3P4 1428 aa14.83□□□□□ -0.04
C2CD3-219ENST00000542930 MYO5BQ9ULV0 1848 aa14.82□□□□□ -0.04
C2CD3-219ENST00000542930 GCC2Q8IWJ2 1684 aa14.82□□□□□ -0.04
C2CD3-219ENST00000542930 PNPLA6Q8IY17 1366 aa14.82□□□□□ -0.04
C2CD3-219ENST00000542930 NHSL1Q5SYE7 1610 aa14.81□□□□□ -0.04
C2CD3-219ENST00000542930 CHIC2Q9UKJ5 165 aa14.81□□□□□ -0.04
C2CD3-219ENST00000542930 MST1RQ04912 1400 aa14.81□□□□□ -0.04
C2CD3-219ENST00000542930 SETBP1Q9Y6X0 1596 aa14.81□□□□□ -0.04
C2CD3-219ENST00000542930 PTPRUQ92729 1446 aa14.8□□□□□ -0.04
C2CD3-219ENST00000542930 TRPM2O94759 1503 aa14.8□□□□□ -0.04
C2CD3-219ENST00000542930 PTPN23Q9H3S7 1636 aa14.8□□□□□ -0.04
C2CD3-219ENST00000542930 CHGAP10645 457 aaKnown RBP14.79□□□□□ -0.04
C2CD3-219ENST00000542930 CCDC125Q86Z20 511 aa14.79□□□□□ -0.04
C2CD3-219ENST00000542930 ADAMTS2O95450 1211 aa14.78□□□□□ -0.04
C2CD3-219ENST00000542930 TRPC5Q9UL62 973 aaPredicted RBP14.78□□□□□ -0.04
C2CD3-219ENST00000542930 DDX17Q92841 729 aaKnown RBP14.77□□□□□ -0.05
C2CD3-219ENST00000542930 USP21Q9UK80 565 aa14.77□□□□□ -0.05
C2CD3-219ENST00000542930 FNBP4Q8N3X1 1017 aaPredicted RBP14.75□□□□□ -0.05
C2CD3-219ENST00000542930 ADGRL2O95490 1459 aa14.73□□□□□ -0.05
C2CD3-219ENST00000542930 ATRNO75882 1429 aa14.73□□□□□ -0.05
C2CD3-219ENST00000542930 ANKRD50Q9ULJ7 1429 aa14.73□□□□□ -0.05
C2CD3-219ENST00000542930 UNC13BO14795 1591 aa14.73□□□□□ -0.05
C2CD3-219ENST00000542930 XRN1Q8IZH2 1706 aaKnown RBP14.72□□□□□ -0.05
C2CD3-219ENST00000542930 PTCH1Q13635 1447 aa14.72□□□□□ -0.05
C2CD3-219ENST00000542930 ADGRL3Q9HAR2 1447 aa14.71□□□□□ -0.05
C2CD3-219ENST00000542930 SOS2Q07890 1332 aaPredicted RBP14.69□□□□□ -0.06
C2CD3-219ENST00000542930 C1orf167Q5SNV9 1468 aa14.69□□□□□ -0.06
C2CD3-219ENST00000542930 LAMC1P11047 1609 aa14.68□□□□□ -0.06
C2CD3-219ENST00000542930 METP08581 1390 aa14.68□□□□□ -0.06
C2CD3-219ENST00000542930 NRXN3Q9Y4C0 1643 aa14.67□□□□□ -0.06
C2CD3-219ENST00000542930 BLMP54132 1417 aaPredicted RBP14.66□□□□□ -0.06
C2CD3-219ENST00000542930 E9PCH4 1651 aa14.65□□□□□ -0.06
C2CD3-219ENST00000542930 BCL9LQ86UU0 1499 aa14.65□□□□□ -0.06
C2CD3-219ENST00000542930 GJD4Q96KN9 370 aaPredicted RBP14.65□□□□□ -0.06
C2CD3-219ENST00000542930 NALCNQ8IZF0 1738 aa14.64□□□□□ -0.07
C2CD3-219ENST00000542930 APLP2Q06481 763 aa14.64□□□□□ -0.07
C2CD3-219ENST00000542930 ORAI2Q96SN7 254 aa14.64□□□□□ -0.07
C2CD3-219ENST00000542930 MYOM2P54296 1465 aa14.63□□□□□ -0.07
C2CD3-219ENST00000542930 LRP5O75197 1615 aa14.63□□□□□ -0.07
C2CD3-219ENST00000542930 COL22A1Q8NFW1 1626 aaPredicted RBP14.63□□□□□ -0.07
C2CD3-219ENST00000542930 DEFB132Q7Z7B7 95 aa14.61□□□□□ -0.07
C2CD3-219ENST00000542930 IQGAP3Q86VI3 1631 aa14.61□□□□□ -0.07
C2CD3-219ENST00000542930 SF3B2Q13435 895 aaKnown RBP14.6□□□□□ -0.07
C2CD3-219ENST00000542930 ZNF326Q5BKZ1 582 aaKnown RBP14.6□□□□□ -0.07
C2CD3-219ENST00000542930 FAM50AQ14320 339 aaKnown RBP14.59□□□□□ -0.07
C2CD3-219ENST00000542930 NPHP3Q7Z494 1330 aa14.58□□□□□ -0.08
C2CD3-219ENST00000542930 UNC5CLQ8IV45 518 aa14.57□□□□□ -0.08
C2CD3-219ENST00000542930 RALGAPBQ86X10 1494 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms